RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 CHODLQ9H9P2 273 aa10.32□□□□□ -0.76
TNFRSF8-203ENST00000417814 PRRC2AP48634 2157 aaKnown RBP10.32□□□□□ -0.76
TNFRSF8-203ENST00000417814 TRAV40A0A0B4J280 105 aa10.31□□□□□ -0.76
TNFRSF8-203ENST00000417814 ATP5IP56385 69 aaPredicted RBP10.31□□□□□ -0.76
TNFRSF8-203ENST00000417814 RPS20P60866 119 aaKnown RBP10.31□□□□□ -0.76
TNFRSF8-203ENST00000417814 HIST1H1AQ02539 215 aaPredicted RBP10.31□□□□□ -0.76
TNFRSF8-203ENST00000417814 C3orf36Q3SXR2 165 aa10.31□□□□□ -0.76
TNFRSF8-203ENST00000417814 A0A1B0GV72 72 aa10.31□□□□□ -0.76
TNFRSF8-203ENST00000417814 AZU1P20160 251 aa10.31□□□□□ -0.76
TNFRSF8-203ENST00000417814 CHCHD1Q96BP2 118 aaKnown RBP10.31□□□□□ -0.76
TNFRSF8-203ENST00000417814 G3V4G9 280 aa10.31□□□□□ -0.76
TNFRSF8-203ENST00000417814 RPL7P18124 248 aaKnown RBP10.31□□□□□ -0.76
TNFRSF8-203ENST00000417814 MYCNOSP40205 109 aa10.31□□□□□ -0.76
TNFRSF8-203ENST00000417814 ZC2HC1BQ5TFG8 222 aa10.31□□□□□ -0.76
TNFRSF8-203ENST00000417814 PRSS22Q9GZN4 317 aa10.31□□□□□ -0.76
TNFRSF8-203ENST00000417814 SPCS1Q9Y6A9 102 aa10.31□□□□□ -0.76
TNFRSF8-203ENST00000417814 ZFP36P26651 326 aaKnown RBP10.3□□□□□ -0.76
TNFRSF8-203ENST00000417814 DLX6P56179 175 aa10.3□□□□□ -0.76
TNFRSF8-203ENST00000417814 PET117Q6UWS5 81 aa10.3□□□□□ -0.76
TNFRSF8-203ENST00000417814 PRR25Q96S07 402 aa10.3□□□□□ -0.76
TNFRSF8-203ENST00000417814 JMJD8Q96S16 334 aa10.3□□□□□ -0.76
TNFRSF8-203ENST00000417814 ZNF462Q96JM2 2506 aa10.3□□□□□ -0.76
TNFRSF8-203ENST00000417814 ATP6V0E1O15342 81 aa10.3□□□□□ -0.76
TNFRSF8-203ENST00000417814 KLF5Q13887 457 aaPredicted RBP10.3□□□□□ -0.76
TNFRSF8-203ENST00000417814 IGHV3-64A0A075B6Q5 118 aa10.3□□□□□ -0.76
TNFRSF8-203ENST00000417814 NDUFS8O00217 210 aa10.3□□□□□ -0.76
TNFRSF8-203ENST00000417814 HBDP02042 147 aa10.3□□□□□ -0.76
TNFRSF8-203ENST00000417814 PF4V1P10720 104 aa10.3□□□□□ -0.76
TNFRSF8-203ENST00000417814 FAM104BQ5XKR9 115 aa10.3□□□□□ -0.76
TNFRSF8-203ENST00000417814 MAP1LC3AQ9H492 121 aa10.3□□□□□ -0.76
TNFRSF8-203ENST00000417814 ZFHX3Q15911 3703 aa10.3□□□□□ -0.76
TNFRSF8-203ENST00000417814 A6NDN8 102 aa10.29□□□□□ -0.76
TNFRSF8-203ENST00000417814 TMEM78Q5T7P6 136 aa10.29□□□□□ -0.76
TNFRSF8-203ENST00000417814 KLF12Q9Y4X4 402 aa10.29□□□□□ -0.76
TNFRSF8-203ENST00000417814 FANCD2OSQ96PS1 177 aa10.29□□□□□ -0.76
TNFRSF8-203ENST00000417814 A0A0G2JLM5 398 aa10.29□□□□□ -0.76
TNFRSF8-203ENST00000417814 C14orf178Q8N769 122 aaPredicted RBP10.29□□□□□ -0.76
TNFRSF8-203ENST00000417814 CFHR4Q92496 578 aa10.29□□□□□ -0.76
TNFRSF8-203ENST00000417814 DUX5Q96PT3 197 aa10.29□□□□□ -0.76
TNFRSF8-203ENST00000417814 IGKV2D-26A0A0A0MRZ7 120 aa10.28□□□□□ -0.76
TNFRSF8-203ENST00000417814 H3BRN7 92 aa10.28□□□□□ -0.76
TNFRSF8-203ENST00000417814 CRYGCP07315 174 aa10.28□□□□□ -0.76
TNFRSF8-203ENST00000417814 IGFL3Q6UXB1 125 aa10.28□□□□□ -0.76
TNFRSF8-203ENST00000417814 HAX1O00165 279 aa10.28□□□□□ -0.76
TNFRSF8-203ENST00000417814 SIGMAR1Q99720 223 aa10.28□□□□□ -0.76
TNFRSF8-203ENST00000417814 BPESC1Q9GZL8 116 aa10.28□□□□□ -0.76
TNFRSF8-203ENST00000417814 SCRT2Q9NQ03 307 aa10.28□□□□□ -0.76
TNFRSF8-203ENST00000417814 CEACAM4O75871 244 aa10.27□□□□□ -0.76
TNFRSF8-203ENST00000417814 TCF15Q12870 199 aa10.27□□□□□ -0.76
TNFRSF8-203ENST00000417814 RNASE4P34096 147 aaKnown RBP10.27□□□□□ -0.77
TNFRSF8-203ENST00000417814 BSNQ9UPA5 3926 aa10.27□□□□□ -0.77
TNFRSF8-203ENST00000417814 FABP5P3A8MUU1 101 aa10.27□□□□□ -0.77
TNFRSF8-203ENST00000417814 TNFRSF6BO95407 300 aa10.27□□□□□ -0.77
TNFRSF8-203ENST00000417814 CTSGP08311 255 aa10.27□□□□□ -0.77
TNFRSF8-203ENST00000417814 SAA4P35542 130 aa10.27□□□□□ -0.77
TNFRSF8-203ENST00000417814 RASL11AQ6T310 242 aa10.27□□□□□ -0.77
TNFRSF8-203ENST00000417814 SCGB1D4Q6XE38 83 aa10.27□□□□□ -0.77
TNFRSF8-203ENST00000417814 HIST1H4GQ99525 98 aa10.27□□□□□ -0.77
TNFRSF8-203ENST00000417814 VKORC1Q9BQB6 163 aa10.26□□□□□ -0.77
TNFRSF8-203ENST00000417814 LOC107984156A0A0G2JMH3 177 aa10.26□□□□□ -0.77
TNFRSF8-203ENST00000417814 TEX48A0A1B0GUV7 120 aa10.26□□□□□ -0.77
TNFRSF8-203ENST00000417814 TMEM8BA6NDV4 472 aa10.26□□□□□ -0.77
TNFRSF8-203ENST00000417814 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.26□□□□□ -0.77
TNFRSF8-203ENST00000417814 ARL17AQ8IVW1 177 aa10.26□□□□□ -0.77
TNFRSF8-203ENST00000417814 CYSLTR1Q9Y271 337 aa10.26□□□□□ -0.77
TNFRSF8-203ENST00000417814 LINC00311Q8N616 119 aa10.26□□□□□ -0.77
TNFRSF8-203ENST00000417814 MYOZ3Q8TDC0 251 aa10.26□□□□□ -0.77
TNFRSF8-203ENST00000417814 VPS13CQ709C8 3753 aa10.26□□□□□ -0.77
TNFRSF8-203ENST00000417814 APOMO95445 188 aa10.25□□□□□ -0.77
TNFRSF8-203ENST00000417814 TRBV12-3P01733 135 aa10.25□□□□□ -0.77
TNFRSF8-203ENST00000417814 COX8AP10176 69 aa10.25□□□□□ -0.77
TNFRSF8-203ENST00000417814 FABP2P12104 132 aa10.25□□□□□ -0.77
TNFRSF8-203ENST00000417814 FXYD2P54710 66 aa10.25□□□□□ -0.77
TNFRSF8-203ENST00000417814 ZNF492Q9P255 531 aa10.25□□□□□ -0.77
TNFRSF8-203ENST00000417814 FBN2P35556 2912 aa10.25□□□□□ -0.77
TNFRSF8-203ENST00000417814 PVRIGQ6DKI7 326 aa10.25□□□□□ -0.77
TNFRSF8-203ENST00000417814 DTX2Q86UW9 622 aa10.25□□□□□ -0.77
TNFRSF8-203ENST00000417814 MRPL35Q9NZE8 188 aaKnown RBP10.25□□□□□ -0.77
TNFRSF8-203ENST00000417814 RAB9AP51151 201 aa10.25□□□□□ -0.77
TNFRSF8-203ENST00000417814 SEC11AP67812 179 aa10.25□□□□□ -0.77
TNFRSF8-203ENST00000417814 CD300EQ496F6 205 aaPredicted RBP10.25□□□□□ -0.77
TNFRSF8-203ENST00000417814 KHDC1LQ5JSQ8 128 aa10.25□□□□□ -0.77
TNFRSF8-203ENST00000417814 AGPAT4-IT1Q9H0P7 198 aa10.25□□□□□ -0.77
TNFRSF8-203ENST00000417814 LINC00574Q9H8X3 128 aa10.25□□□□□ -0.77
TNFRSF8-203ENST00000417814 TSSC4Q9Y5U2 329 aaPredicted RBP10.25□□□□□ -0.77
TNFRSF8-203ENST00000417814 A0A087WWL8 130 aa10.24□□□□□ -0.77
TNFRSF8-203ENST00000417814 C9orf118A6NHY6 69 aa10.24□□□□□ -0.77
TNFRSF8-203ENST00000417814 K7EP34 96 aa10.24□□□□□ -0.77
TNFRSF8-203ENST00000417814 TMEM95Q3KNT9 176 aa10.24□□□□□ -0.77
TNFRSF8-203ENST00000417814 NRGNQ92686 78 aa10.24□□□□□ -0.77
TNFRSF8-203ENST00000417814 NF1P21359 2839 aa10.24□□□□□ -0.77
TNFRSF8-203ENST00000417814 SMIM17P0DL12 118 aa10.24□□□□□ -0.77
TNFRSF8-203ENST00000417814 TMEM30BQ3MIR4 351 aa10.24□□□□□ -0.77
TNFRSF8-203ENST00000417814 CKS1BP61024 79 aa10.24□□□□□ -0.77
TNFRSF8-203ENST00000417814 SRSF9Q13242 221 aaKnown RBP eCLIP10.24□□□□□ -0.77
TNFRSF8-203ENST00000417814 ZNF256Q9Y2P7 627 aaPredicted RBP10.24□□□□□ -0.77
TNFRSF8-203ENST00000417814 PHLDA3Q9Y5J5 127 aa10.24□□□□□ -0.77
TNFRSF8-203ENST00000417814 IGHV3-73A0A0B4J1V6 119 aa10.23□□□□□ -0.77
TNFRSF8-203ENST00000417814 HSD52Q0P140 79 aa10.23□□□□□ -0.77
TNFRSF8-203ENST00000417814 ZNF562Q6V9R5 426 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms