RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 ZNF680Q8NEM1 530 aa12.82□□□□□ -0.36
SEMA3B-201ENST00000416295 NKX6-2Q9C056 277 aaPredicted RBP12.82□□□□□ -0.36
SEMA3B-201ENST00000416295 EPDR1Q9UM22 224 aa12.82□□□□□ -0.36
SEMA3B-201ENST00000416295 SNURFLB1AK76 121 aa12.81□□□□□ -0.36
SEMA3B-201ENST00000416295 FHITP49789 147 aa12.81□□□□□ -0.36
SEMA3B-201ENST00000416295 EIF5AL1Q6IS14 154 aaKnown RBP12.81□□□□□ -0.36
SEMA3B-201ENST00000416295 EIF4E3Q8N5X7 224 aaKnown RBP12.81□□□□□ -0.36
SEMA3B-201ENST00000416295 FAM213BQ8TBF2 198 aa12.81□□□□□ -0.36
SEMA3B-201ENST00000416295 TMPRSS5Q9H3S3 457 aa12.81□□□□□ -0.36
SEMA3B-201ENST00000416295 PLA2G2EQ9NZK7 142 aa12.81□□□□□ -0.36
SEMA3B-201ENST00000416295 DNAH1Q9P2D7 4330 aa12.81□□□□□ -0.36
SEMA3B-201ENST00000416295 TRAV8-1A0A0A6YYK1 113 aa12.8□□□□□ -0.36
SEMA3B-201ENST00000416295 FBLL1A6NHQ2 334 aaKnown RBP12.8□□□□□ -0.36
SEMA3B-201ENST00000416295 CBY3A6NI87 242 aa12.8□□□□□ -0.36
SEMA3B-201ENST00000416295 RGS13O14921 159 aa12.8□□□□□ -0.36
SEMA3B-201ENST00000416295 DEFB130BP0DP73 79 aa12.8□□□□□ -0.36
SEMA3B-201ENST00000416295 DEFB130AP0DP74 79 aa12.8□□□□□ -0.36
SEMA3B-201ENST00000416295 ANXA2RQ3ZCQ2 193 aa12.8□□□□□ -0.36
SEMA3B-201ENST00000416295 CYB561D1Q8N8Q1 229 aa12.8□□□□□ -0.36
SEMA3B-201ENST00000416295 LINC00476Q8WZB0 136 aa12.8□□□□□ -0.36
SEMA3B-201ENST00000416295 ATG101Q9BSB4 218 aa12.8□□□□□ -0.36
SEMA3B-201ENST00000416295 NDFIP1Q9BT67 221 aa12.8□□□□□ -0.36
SEMA3B-201ENST00000416295 NOP10Q9NPE3 64 aaKnown RBP12.8□□□□□ -0.36
SEMA3B-201ENST00000416295 IGHV4-4A0A075B6R2 117 aa12.79□□□□□ -0.36
SEMA3B-201ENST00000416295 IGHV1OR15-1A0A075B7D0 117 aa12.79□□□□□ -0.36
SEMA3B-201ENST00000416295 IFNA7P01567 189 aa12.79□□□□□ -0.36
SEMA3B-201ENST00000416295 UBE2G2P60604 165 aa12.79□□□□□ -0.36
SEMA3B-201ENST00000416295 Q6AWC8 147 aa12.79□□□□□ -0.36
SEMA3B-201ENST00000416295 TREM1Q9NP99 234 aa12.79□□□□□ -0.36
SEMA3B-201ENST00000416295 FAM74A7A6NL05 159 aa12.78□□□□□ -0.36
SEMA3B-201ENST00000416295 HTN3P15516 51 aa12.78□□□□□ -0.36
SEMA3B-201ENST00000416295 TMEM75Q8N9X5 138 aa12.78□□□□□ -0.36
SEMA3B-201ENST00000416295 SFT2D1Q8WV19 159 aa12.78□□□□□ -0.36
SEMA3B-201ENST00000416295 MBD3L1Q8WWY6 194 aa12.78□□□□□ -0.36
SEMA3B-201ENST00000416295 FAM210BQ96KR6 192 aa12.78□□□□□ -0.36
SEMA3B-201ENST00000416295 ARL2-SNX15V9GYD0 113 aa12.78□□□□□ -0.36
SEMA3B-201ENST00000416295 LY6G6CO95867 125 aa12.77□□□□□ -0.37
SEMA3B-201ENST00000416295 RAB5CP51148 216 aa12.77□□□□□ -0.37
SEMA3B-201ENST00000416295 FLI1Q01543 452 aaPredicted RBP12.77□□□□□ -0.37
SEMA3B-201ENST00000416295 DAZ2Q13117 558 aaKnown RBP12.77□□□□□ -0.37
SEMA3B-201ENST00000416295 ZFP69Q49AA0 526 aa12.77□□□□□ -0.37
SEMA3B-201ENST00000416295 IBA57Q5T440 356 aaKnown RBP12.77□□□□□ -0.37
SEMA3B-201ENST00000416295 SLC51BQ86UW2 128 aa12.77□□□□□ -0.37
SEMA3B-201ENST00000416295 APLNQ9ULZ1 77 aa12.77□□□□□ -0.37
SEMA3B-201ENST00000416295 H2AFB1P0C5Y9 115 aa12.76□□□□□ -0.37
SEMA3B-201ENST00000416295 PPT1P50897 306 aa12.76□□□□□ -0.37
SEMA3B-201ENST00000416295 C11orf72Q8NBR9 251 aa12.76□□□□□ -0.37
SEMA3B-201ENST00000416295 HIST1H2BAQ96A08 127 aa12.76□□□□□ -0.37
SEMA3B-201ENST00000416295 TVP23CQ96ET8 276 aa12.76□□□□□ -0.37
SEMA3B-201ENST00000416295 SGK494Q96LW2 274 aa12.76□□□□□ -0.37
SEMA3B-201ENST00000416295 TCEAL7Q9BRU2 100 aa12.76□□□□□ -0.37
SEMA3B-201ENST00000416295 NDUFAF3Q9BU61 184 aa12.76□□□□□ -0.37
SEMA3B-201ENST00000416295 GSN-AS1Q9NRJ2 163 aa12.76□□□□□ -0.37
SEMA3B-201ENST00000416295 PSG8Q9UQ74 426 aa12.76□□□□□ -0.37
SEMA3B-201ENST00000416295 TRAV21A0A0B4J279 112 aa12.75□□□□□ -0.37
SEMA3B-201ENST00000416295 F6UZH7 168 aa12.75□□□□□ -0.37
SEMA3B-201ENST00000416295 PEX7O00628 323 aa12.75□□□□□ -0.37
SEMA3B-201ENST00000416295 ATP5G1P05496 136 aa12.75□□□□□ -0.37
SEMA3B-201ENST00000416295 ATP5G3P48201 142 aa12.75□□□□□ -0.37
SEMA3B-201ENST00000416295 TCL1AP56279 114 aa12.75□□□□□ -0.37
SEMA3B-201ENST00000416295 LGALS9CQ6DKI2 356 aa12.75□□□□□ -0.37
SEMA3B-201ENST00000416295 FAM159AQ6UWV7 190 aa12.75□□□□□ -0.37
SEMA3B-201ENST00000416295 Q6ZQT7 251 aa12.75□□□□□ -0.37
SEMA3B-201ENST00000416295 LINC00612Q8N6U2 182 aa12.75□□□□□ -0.37
SEMA3B-201ENST00000416295 A0A1B0GVG6 124 aa12.74□□□□□ -0.37
SEMA3B-201ENST00000416295 IGLV2-11P01706 119 aa12.74□□□□□ -0.37
SEMA3B-201ENST00000416295 ZNF415Q09FC8 603 aa12.74□□□□□ -0.37
SEMA3B-201ENST00000416295 MUC21Q5SSG8 566 aa12.74□□□□□ -0.37
SEMA3B-201ENST00000416295 SAPCD1Q5SSQ6 148 aa12.74□□□□□ -0.37
SEMA3B-201ENST00000416295 CST9LP1Q5W188 147 aa12.74□□□□□ -0.37
SEMA3B-201ENST00000416295 PRNTQ86SH4 94 aa12.74□□□□□ -0.37
SEMA3B-201ENST00000416295 C9orf62Q8N4C0 152 aa12.74□□□□□ -0.37
SEMA3B-201ENST00000416295 GAGE12BA1L429 117 aa12.73□□□□□ -0.37
SEMA3B-201ENST00000416295 GAGE7O76087 117 aa12.73□□□□□ -0.37
SEMA3B-201ENST00000416295 GAGE12FP0CL80 117 aa12.73□□□□□ -0.37
SEMA3B-201ENST00000416295 GAGE12GP0CL81 117 aa12.73□□□□□ -0.37
SEMA3B-201ENST00000416295 GAGE12IP0CL82 117 aa12.73□□□□□ -0.37
SEMA3B-201ENST00000416295 NAGKQ9UJ70 344 aa12.73□□□□□ -0.37
SEMA3B-201ENST00000416295 TP53TG3Q9ULZ0 132 aa12.73□□□□□ -0.37
SEMA3B-201ENST00000416295 TRGV11A0A075B6L2 103 aa12.72□□□□□ -0.37
SEMA3B-201ENST00000416295 A0A1B0GV50 99 aa12.72□□□□□ -0.37
SEMA3B-201ENST00000416295 TEX46H3BTG2 121 aa12.72□□□□□ -0.37
SEMA3B-201ENST00000416295 PAGE4O60829 102 aa12.72□□□□□ -0.37
SEMA3B-201ENST00000416295 SULT1A2P50226 295 aa12.72□□□□□ -0.37
SEMA3B-201ENST00000416295 TDRG1Q3Y452 100 aa12.72□□□□□ -0.37
SEMA3B-201ENST00000416295 SMUG1Q53HV7 270 aa12.72□□□□□ -0.37
SEMA3B-201ENST00000416295 KLF12Q9Y4X4 402 aa12.72□□□□□ -0.37
SEMA3B-201ENST00000416295 ALMS1Q8TCU4 4167 aa12.72□□□□□ -0.37
SEMA3B-201ENST00000416295 TRAV1-1A0A0B4J248 108 aa12.71□□□□□ -0.37
SEMA3B-201ENST00000416295 TRAV34A0A0B4J273 112 aa12.71□□□□□ -0.37
SEMA3B-201ENST00000416295 F5H768 121 aa12.71□□□□□ -0.37
SEMA3B-201ENST00000416295 Q6ZTI0 123 aa12.71□□□□□ -0.37
SEMA3B-201ENST00000416295 KCNS1Q96KK3 526 aa12.71□□□□□ -0.37
SEMA3B-201ENST00000416295 LINC00479Q96M42 142 aa12.71□□□□□ -0.37
SEMA3B-201ENST00000416295 C8orf49Q96NF6 230 aa12.71□□□□□ -0.37
SEMA3B-201ENST00000416295 TRGV1A0A0A0MS02 117 aa12.7□□□□□ -0.38
SEMA3B-201ENST00000416295 GCGP01275 180 aa12.7□□□□□ -0.38
SEMA3B-201ENST00000416295 PFN1P07737 140 aaKnown RBP12.7□□□□□ -0.38
SEMA3B-201ENST00000416295 TMEM183BQ1AE95 376 aa12.7□□□□□ -0.38
SEMA3B-201ENST00000416295 LGALS9BQ3B8N2 356 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms