RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 PMCHL1Q16048 86 aa7□□□□□ -1.29
CHRNA1-206ENST00000416004 STXBP6Q8NFX7 210 aa7□□□□□ -1.29
CHRNA1-206ENST00000416004 BLNKQ8WV28 456 aa7□□□□□ -1.29
CHRNA1-206ENST00000416004 TMEM190Q8WZ59 177 aa7□□□□□ -1.29
CHRNA1-206ENST00000416004 TMEM14CQ9P0S9 112 aa7□□□□□ -1.29
CHRNA1-206ENST00000416004 RPH3ALQ9UNE2 315 aa7□□□□□ -1.29
CHRNA1-206ENST00000416004 U3KQE9 123 aa7□□□□□ -1.29
CHRNA1-206ENST00000416004 BUB3O43684 328 aa6.99□□□□□ -1.29
CHRNA1-206ENST00000416004 ZNF253O75346 499 aa6.99□□□□□ -1.29
CHRNA1-206ENST00000416004 SERF1AO75920 110 aa6.99□□□□□ -1.29
CHRNA1-206ENST00000416004 TSPOP30536 169 aa6.99□□□□□ -1.29
CHRNA1-206ENST00000416004 COX19Q49B96 90 aa6.99□□□□□ -1.29
CHRNA1-206ENST00000416004 Q8N976 141 aa6.99□□□□□ -1.29
CHRNA1-206ENST00000416004 METTL26Q96S19 204 aa6.99□□□□□ -1.29
CHRNA1-206ENST00000416004 SAMD10Q9BYL1 202 aa6.99□□□□□ -1.29
CHRNA1-206ENST00000416004 SMAD5-AS1Q9Y6J3 95 aa6.99□□□□□ -1.29
CHRNA1-206ENST00000416004 NOTCH3Q9UM47 2321 aa6.99□□□□□ -1.29
CHRNA1-206ENST00000416004 SCO2A0A1W2PP80 73 aa6.98□□□□□ -1.29
CHRNA1-206ENST00000416004 PDE6DO43924 150 aa6.98□□□□□ -1.29
CHRNA1-206ENST00000416004 NDUFB4O95168 129 aa6.98□□□□□ -1.29
CHRNA1-206ENST00000416004 HIST1H1EP10412 219 aaKnown RBP6.98□□□□□ -1.29
CHRNA1-206ENST00000416004 LINC00310P59036 64 aa6.98□□□□□ -1.29
CHRNA1-206ENST00000416004 TM4SF20Q53R12 229 aa6.98□□□□□ -1.29
CHRNA1-206ENST00000416004 OR10J3Q5JRS4 329 aa6.98□□□□□ -1.29
CHRNA1-206ENST00000416004 BPIFA4PQ86YQ2 179 aa6.98□□□□□ -1.29
CHRNA1-206ENST00000416004 TXNDC17Q9BRA2 123 aa6.98□□□□□ -1.29
CHRNA1-206ENST00000416004 DERL1Q9BUN8 251 aa6.98□□□□□ -1.29
CHRNA1-206ENST00000416004 TP53TG3Q9ULZ0 132 aa6.98□□□□□ -1.29
CHRNA1-206ENST00000416004 A0A1W2PRE2 83 aa6.98□□□□□ -1.29
CHRNA1-206ENST00000416004 SLC17A3O00476 420 aa6.98□□□□□ -1.29
CHRNA1-206ENST00000416004 MT-ND6P03923 174 aa6.98□□□□□ -1.29
CHRNA1-206ENST00000416004 GPX1P07203 203 aa6.98□□□□□ -1.29
CHRNA1-206ENST00000416004 PRB4P10163 310 aaPredicted RBP6.98□□□□□ -1.29
CHRNA1-206ENST00000416004 RPEL1Q2QD12 228 aa6.98□□□□□ -1.29
CHRNA1-206ENST00000416004 PRR27Q6MZM9 219 aa6.98□□□□□ -1.29
CHRNA1-206ENST00000416004 GPHB5Q86YW7 130 aa6.98□□□□□ -1.29
CHRNA1-206ENST00000416004 OR8I2Q8N0Y5 310 aa6.98□□□□□ -1.29
CHRNA1-206ENST00000416004 ZNF256Q9Y2P7 627 aaPredicted RBP6.98□□□□□ -1.29
CHRNA1-206ENST00000416004 SELENOKQ9Y6D0 94 aa6.98□□□□□ -1.29
CHRNA1-206ENST00000416004 ARL2-SNX15V9GYD0 113 aa6.98□□□□□ -1.29
CHRNA1-206ENST00000416004 TRBV19A0A075B6N1 114 aa6.97□□□□□ -1.29
CHRNA1-206ENST00000416004 SLURP1P55000 103 aa6.97□□□□□ -1.29
CHRNA1-206ENST00000416004 SYNJ2BPP57105 145 aa6.97□□□□□ -1.29
CHRNA1-206ENST00000416004 KRTAP10-11P60412 298 aa6.97□□□□□ -1.29
CHRNA1-206ENST00000416004 VAMP3Q15836 100 aa6.97□□□□□ -1.29
CHRNA1-206ENST00000416004 S100A7AQ86SG5 101 aa6.97□□□□□ -1.29
CHRNA1-206ENST00000416004 EXOC3-AS1Q8N2X6 119 aa6.97□□□□□ -1.29
CHRNA1-206ENST00000416004 PEMTQ9UBM1 199 aa6.97□□□□□ -1.29
CHRNA1-206ENST00000416004 TMEM213A2RRL7 107 aa6.96□□□□□ -1.29
CHRNA1-206ENST00000416004 K7EIL1 84 aa6.96□□□□□ -1.29
CHRNA1-206ENST00000416004 SCGB1A1P11684 91 aa6.96□□□□□ -1.29
CHRNA1-206ENST00000416004 RPL7P18124 248 aaKnown RBP6.96□□□□□ -1.29
CHRNA1-206ENST00000416004 GNG5P63218 68 aa6.96□□□□□ -1.29
CHRNA1-206ENST00000416004 FAM106AQ4KMX7 169 aa6.96□□□□□ -1.29
CHRNA1-206ENST00000416004 SIGLEC15Q6ZMC9 328 aa6.96□□□□□ -1.29
CHRNA1-206ENST00000416004 BAGE3Q86Y29 109 aa6.96□□□□□ -1.29
CHRNA1-206ENST00000416004 BAGE2Q86Y30 109 aa6.96□□□□□ -1.29
CHRNA1-206ENST00000416004 GLMPQ8WWB7 406 aa6.96□□□□□ -1.29
CHRNA1-206ENST00000416004 DLX4Q92988 240 aaPredicted RBP6.96□□□□□ -1.29
CHRNA1-206ENST00000416004 C11orf52Q96A22 123 aa6.96□□□□□ -1.29
CHRNA1-206ENST00000416004 KCNS1Q96KK3 526 aa6.96□□□□□ -1.29
CHRNA1-206ENST00000416004 Q9H3A6 140 aa6.96□□□□□ -1.29
CHRNA1-206ENST00000416004 DAZ1Q9NQZ3 744 aaKnown RBP6.96□□□□□ -1.29
CHRNA1-206ENST00000416004 IGHV7-4-1A0A0J9YVY3 117 aa6.96□□□□□ -1.3
CHRNA1-206ENST00000416004 PGPA6NDG6 321 aa6.96□□□□□ -1.3
CHRNA1-206ENST00000416004 KRTDAPP60985 99 aa6.96□□□□□ -1.3
CHRNA1-206ENST00000416004 C16orf54Q6UWD8 224 aa6.96□□□□□ -1.3
CHRNA1-206ENST00000416004 NIT1Q86X76 327 aa6.96□□□□□ -1.3
CHRNA1-206ENST00000416004 SFRP2Q96HF1 295 aa6.96□□□□□ -1.3
CHRNA1-206ENST00000416004 TRBV20OR9-2A0A075B6H5 130 aa6.95□□□□□ -1.3
CHRNA1-206ENST00000416004 K7EMT4 169 aa6.95□□□□□ -1.3
CHRNA1-206ENST00000416004 HINT1P49773 126 aaPredicted RBP6.95□□□□□ -1.3
CHRNA1-206ENST00000416004 KLF5Q13887 457 aaPredicted RBP6.95□□□□□ -1.3
CHRNA1-206ENST00000416004 IGFL4Q6B9Z1 124 aa6.95□□□□□ -1.3
CHRNA1-206ENST00000416004 WDR73Q6P4I2 378 aa6.95□□□□□ -1.3
CHRNA1-206ENST00000416004 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.95□□□□□ -1.3
CHRNA1-206ENST00000416004 LINC00479Q96M42 142 aa6.95□□□□□ -1.3
CHRNA1-206ENST00000416004 PRR25Q96S07 402 aa6.95□□□□□ -1.3
CHRNA1-206ENST00000416004 B9D2Q9BPU9 175 aa6.95□□□□□ -1.3
CHRNA1-206ENST00000416004 RHPN1-AS1Q9BWJ2 59 aa6.95□□□□□ -1.3
CHRNA1-206ENST00000416004 GNB1LQ9BYB4 327 aa6.95□□□□□ -1.3
CHRNA1-206ENST00000416004 MRPL18Q9H0U6 180 aaKnown RBP6.95□□□□□ -1.3
CHRNA1-206ENST00000416004 NRN1Q9NPD7 142 aa6.95□□□□□ -1.3
CHRNA1-206ENST00000416004 SMPXQ9UHP9 88 aa6.95□□□□□ -1.3
CHRNA1-206ENST00000416004 GRIFINA4D1Z8 144 aa6.94□□□□□ -1.3
CHRNA1-206ENST00000416004 ZNF785A8K8V0 405 aa6.94□□□□□ -1.3
CHRNA1-206ENST00000416004 M0R3E3 92 aa6.94□□□□□ -1.3
CHRNA1-206ENST00000416004 LGALS9O00182 355 aa6.94□□□□□ -1.3
CHRNA1-206ENST00000416004 CHEK1O14757 476 aa6.94□□□□□ -1.3
CHRNA1-206ENST00000416004 SLC25A5P05141 298 aaKnown RBP6.94□□□□□ -1.3
CHRNA1-206ENST00000416004 NHLRC4P0CG21 123 aaPredicted RBP6.94□□□□□ -1.3
CHRNA1-206ENST00000416004 HLA-DMBP28068 263 aa6.94□□□□□ -1.3
CHRNA1-206ENST00000416004 PSG3Q16557 428 aa6.94□□□□□ -1.3
CHRNA1-206ENST00000416004 ADAMTSL5Q6ZMM2 481 aa6.94□□□□□ -1.3
CHRNA1-206ENST00000416004 OTORQ9NRC9 128 aa6.94□□□□□ -1.3
CHRNA1-206ENST00000416004 IL36BQ9NZH7 164 aa6.94□□□□□ -1.3
CHRNA1-206ENST00000416004 EPDR1Q9UM22 224 aa6.94□□□□□ -1.3
CHRNA1-206ENST00000416004 UFC1Q9Y3C8 167 aa6.94□□□□□ -1.3
CHRNA1-206ENST00000416004 LY96Q9Y6Y9 160 aa6.94□□□□□ -1.3
CHRNA1-206ENST00000416004 TRAV9-2A0A087WT02 112 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms