RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 Q8IYB0 196 aa4.23□□□□□ -1.73
EPHA4-204ENST00000415749 RPP25LQ8N5L8 163 aaKnown RBP4.23□□□□□ -1.73
EPHA4-204ENST00000415749 OR11H1Q8NG94 326 aa4.23□□□□□ -1.73
EPHA4-204ENST00000415749 OR10G4Q8NGN3 311 aa4.23□□□□□ -1.73
EPHA4-204ENST00000415749 OR5C1Q8NGR4 320 aa4.23□□□□□ -1.73
EPHA4-204ENST00000415749 MBD3L1Q8WWY6 194 aa4.23□□□□□ -1.73
EPHA4-204ENST00000415749 SLC25A2Q9BXI2 301 aa4.23□□□□□ -1.73
EPHA4-204ENST00000415749 PARP12Q9H0J9 701 aaKnown RBP4.23□□□□□ -1.73
EPHA4-204ENST00000415749 SLC35B3Q9H1N7 401 aa4.23□□□□□ -1.73
EPHA4-204ENST00000415749 PSG8Q9UQ74 426 aa4.23□□□□□ -1.73
EPHA4-204ENST00000415749 WSB1Q9Y6I7 421 aa4.23□□□□□ -1.73
EPHA4-204ENST00000415749 IGHV2-26A0A0B4J1V2 119 aa4.22□□□□□ -1.73
EPHA4-204ENST00000415749 RBFOX3A6NFN3 312 aa4.22□□□□□ -1.73
EPHA4-204ENST00000415749 MT-ND4LP03901 98 aa4.22□□□□□ -1.73
EPHA4-204ENST00000415749 IFNA4P05014 189 aa4.22□□□□□ -1.73
EPHA4-204ENST00000415749 GIG44P09565 113 aaPredicted RBP4.22□□□□□ -1.73
EPHA4-204ENST00000415749 SULT1A1P50225 295 aa4.22□□□□□ -1.73
EPHA4-204ENST00000415749 RUNX1Q01196 453 aa4.22□□□□□ -1.73
EPHA4-204ENST00000415749 RHEBQ15382 184 aa4.22□□□□□ -1.73
EPHA4-204ENST00000415749 HIGD2BQ4VC39 106 aa4.22□□□□□ -1.73
EPHA4-204ENST00000415749 SAPCD1Q5SSQ6 148 aa4.22□□□□□ -1.73
EPHA4-204ENST00000415749 ACP7Q6ZNF0 438 aa4.22□□□□□ -1.73
EPHA4-204ENST00000415749 SLC35E3Q7Z769 313 aa4.22□□□□□ -1.73
EPHA4-204ENST00000415749 CEND1Q8N111 149 aa4.22□□□□□ -1.73
EPHA4-204ENST00000415749 OR10J5Q8NHC4 309 aa4.22□□□□□ -1.73
EPHA4-204ENST00000415749 FAM213BQ8TBF2 198 aa4.22□□□□□ -1.73
EPHA4-204ENST00000415749 GNPNAT1Q96EK6 184 aaPredicted RBP4.22□□□□□ -1.73
EPHA4-204ENST00000415749 PSMG3Q9BT73 122 aaPredicted RBP4.22□□□□□ -1.73
EPHA4-204ENST00000415749 TMEM133Q9H2Q1 129 aa4.22□□□□□ -1.73
EPHA4-204ENST00000415749 BIN3Q9NQY0 253 aa4.22□□□□□ -1.73
EPHA4-204ENST00000415749 A0A087WWC5 75 aa4.21□□□□□ -1.74
EPHA4-204ENST00000415749 ZNF98A6NK75 572 aa4.21□□□□□ -1.74
EPHA4-204ENST00000415749 OVOL1O14753 267 aa4.21□□□□□ -1.74
EPHA4-204ENST00000415749 SYNGR2O43760 224 aa4.21□□□□□ -1.74
EPHA4-204ENST00000415749 CST7O76096 145 aa4.21□□□□□ -1.74
EPHA4-204ENST00000415749 IGHG2P01859 326 aa4.21□□□□□ -1.74
EPHA4-204ENST00000415749 EDDM3BP56851 147 aa4.21□□□□□ -1.74
EPHA4-204ENST00000415749 HERVK_113P61574 105 aa4.21□□□□□ -1.74
EPHA4-204ENST00000415749 ZNF616Q08AN1 781 aa4.21□□□□□ -1.74
EPHA4-204ENST00000415749 COX19Q49B96 90 aa4.21□□□□□ -1.74
EPHA4-204ENST00000415749 KHDC3LQ587J8 217 aa4.21□□□□□ -1.74
EPHA4-204ENST00000415749 TTC32Q5I0X7 151 aa4.21□□□□□ -1.74
EPHA4-204ENST00000415749 TMEM14EPQ6UXP3 125 aa4.21□□□□□ -1.74
EPHA4-204ENST00000415749 C20orf203Q8NBC4 194 aa4.21□□□□□ -1.74
EPHA4-204ENST00000415749 NPBQ8NG41 125 aa4.21□□□□□ -1.74
EPHA4-204ENST00000415749 OR4P4Q8NGL7 312 aa4.21□□□□□ -1.74
EPHA4-204ENST00000415749 NEK7Q8TDX7 302 aa4.21□□□□□ -1.74
EPHA4-204ENST00000415749 SFT2D1Q8WV19 159 aa4.21□□□□□ -1.74
EPHA4-204ENST00000415749 C4orf3Q8WVX3 66 aa4.21□□□□□ -1.74
EPHA4-204ENST00000415749 MRAP2Q96G30 205 aa4.21□□□□□ -1.74
EPHA4-204ENST00000415749 TMEM101Q96IK0 257 aa4.21□□□□□ -1.74
EPHA4-204ENST00000415749 ZNF714Q96N38 554 aa4.21□□□□□ -1.74
EPHA4-204ENST00000415749 PBDC1Q9BVG4 233 aa4.21□□□□□ -1.74
EPHA4-204ENST00000415749 RPS10P5Q9NQ39 176 aa4.21□□□□□ -1.74
EPHA4-204ENST00000415749 TIMM9Q9Y5J7 89 aa4.21□□□□□ -1.74
EPHA4-204ENST00000415749 hADV38S2A0JD32 116 aa4.2□□□□□ -1.74
EPHA4-204ENST00000415749 TMEM30CPA0ZSE6 113 aa4.2□□□□□ -1.74
EPHA4-204ENST00000415749 C15orf65H3BRN8 121 aa4.2□□□□□ -1.74
EPHA4-204ENST00000415749 ZNF737O75373 536 aa4.2□□□□□ -1.74
EPHA4-204ENST00000415749 HAND1O96004 215 aa4.2□□□□□ -1.74
EPHA4-204ENST00000415749 PRH1P02810 166 aa4.2□□□□□ -1.74
EPHA4-204ENST00000415749 S100GP29377 79 aa4.2□□□□□ -1.74
EPHA4-204ENST00000415749 AKR1C3P42330 323 aa4.2□□□□□ -1.74
EPHA4-204ENST00000415749 RPL30P62888 115 aaKnown RBP4.2□□□□□ -1.74
EPHA4-204ENST00000415749 MEF2CQ06413 473 aaPredicted RBP4.2□□□□□ -1.74
EPHA4-204ENST00000415749 SMIM21Q3B7S5 101 aa4.2□□□□□ -1.74
EPHA4-204ENST00000415749 HEPN1Q6WQI6 88 aa4.2□□□□□ -1.74
EPHA4-204ENST00000415749 C14orf178Q8N769 122 aaPredicted RBP4.2□□□□□ -1.74
EPHA4-204ENST00000415749 ZNF645Q8N7E2 425 aa4.2□□□□□ -1.74
EPHA4-204ENST00000415749 TCTEX1D1Q8N7M0 179 aa4.2□□□□□ -1.74
EPHA4-204ENST00000415749 C5orf56Q8N8D9 126 aa4.2□□□□□ -1.74
EPHA4-204ENST00000415749 OR51H1Q8NH63 302 aa4.2□□□□□ -1.74
EPHA4-204ENST00000415749 OR1L1Q8NH94 360 aa4.2□□□□□ -1.74
EPHA4-204ENST00000415749 TYMSOSQ8TAI1 123 aa4.2□□□□□ -1.74
EPHA4-204ENST00000415749 WDR61Q9GZS3 305 aaKnown RBP4.2□□□□□ -1.74
EPHA4-204ENST00000415749 EIF5A2Q9GZV4 153 aaKnown RBP4.2□□□□□ -1.74
EPHA4-204ENST00000415749 VSIRQ9H7M9 311 aa4.2□□□□□ -1.74
EPHA4-204ENST00000415749 RPRMQ9NS64 109 aa4.2□□□□□ -1.74
EPHA4-204ENST00000415749 METTL1Q9UBP6 276 aaKnown RBP4.2□□□□□ -1.74
EPHA4-204ENST00000415749 TRAV8-6A0A0B4J262 113 aa4.19□□□□□ -1.74
EPHA4-204ENST00000415749 ZFP92A6NM28 416 aa4.19□□□□□ -1.74
EPHA4-204ENST00000415749 OOSP1A8MZH6 123 aa4.19□□□□□ -1.74
EPHA4-204ENST00000415749 C1orf196B1AJZ1 125 aa4.19□□□□□ -1.74
EPHA4-204ENST00000415749 H3BQ15 152 aa4.19□□□□□ -1.74
EPHA4-204ENST00000415749 LY6LH3BQJ8 138 aa4.19□□□□□ -1.74
EPHA4-204ENST00000415749 BUB1B-PAK6H3BSN5 160 aa4.19□□□□□ -1.74
EPHA4-204ENST00000415749 PHOX2AO14813 284 aa4.19□□□□□ -1.74
EPHA4-204ENST00000415749 IGKV1D-33P01593 117 aa4.19□□□□□ -1.74
EPHA4-204ENST00000415749 IGKV1-33P01594 117 aa4.19□□□□□ -1.74
EPHA4-204ENST00000415749 IGLV1-47P01700 117 aa4.19□□□□□ -1.74
EPHA4-204ENST00000415749 OR13C7P0DN81 318 aa4.19□□□□□ -1.74
EPHA4-204ENST00000415749 CGB3P0DN86 165 aa4.19□□□□□ -1.74
EPHA4-204ENST00000415749 CGB7P0DN87 165 aa4.19□□□□□ -1.74
EPHA4-204ENST00000415749 RAB5BP61020 215 aa4.19□□□□□ -1.74
EPHA4-204ENST00000415749 SERF2P84101 59 aa4.19□□□□□ -1.74
EPHA4-204ENST00000415749 TNFRSF9Q07011 255 aa4.19□□□□□ -1.74
EPHA4-204ENST00000415749 TMEM267Q0VDI3 215 aaPredicted RBP4.19□□□□□ -1.74
EPHA4-204ENST00000415749 HES1Q14469 280 aa4.19□□□□□ -1.74
EPHA4-204ENST00000415749 RBMY1FQ15415 496 aaKnown RBP4.19□□□□□ -1.74
EPHA4-204ENST00000415749 AKR1C8PQ5T2L2 129 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms