RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 TMEM167BQ9NRX6 74 aa7.89□□□□□ -1.15
RFFL-204ENST00000414419 KMT2AQ03164 3969 aa7.88□□□□□ -1.15
RFFL-204ENST00000414419 TRGV1A0A0A0MS02 117 aa7.88□□□□□ -1.15
RFFL-204ENST00000414419 K7EQM0 130 aa7.88□□□□□ -1.15
RFFL-204ENST00000414419 GCHFRP30047 84 aa7.88□□□□□ -1.15
RFFL-204ENST00000414419 IBA57Q5T440 356 aaKnown RBP7.88□□□□□ -1.15
RFFL-204ENST00000414419 PRR9Q5T870 116 aa7.88□□□□□ -1.15
RFFL-204ENST00000414419 Q6ZTI0 123 aa7.88□□□□□ -1.15
RFFL-204ENST00000414419 IQCF2Q8IXL9 164 aa7.88□□□□□ -1.15
RFFL-204ENST00000414419 LINC00612Q8N6U2 182 aa7.88□□□□□ -1.15
RFFL-204ENST00000414419 ST6GAL2Q96JF0 529 aa7.88□□□□□ -1.15
RFFL-204ENST00000414419 VPS13DQ5THJ4 4388 aa7.87□□□□□ -1.15
RFFL-204ENST00000414419 MUC4Q99102 2169 aa7.87□□□□□ -1.15
RFFL-204ENST00000414419 SERTM2A0A1B0GWG4 89 aa7.87□□□□□ -1.15
RFFL-204ENST00000414419 M0R2N4 97 aa7.87□□□□□ -1.15
RFFL-204ENST00000414419 CCL18P55774 89 aa7.87□□□□□ -1.15
RFFL-204ENST00000414419 TCL1AP56279 114 aa7.87□□□□□ -1.15
RFFL-204ENST00000414419 ZNF415Q09FC8 603 aa7.87□□□□□ -1.15
RFFL-204ENST00000414419 MUC21Q5SSG8 566 aa7.87□□□□□ -1.15
RFFL-204ENST00000414419 AKR1C8PQ5T2L2 129 aa7.87□□□□□ -1.15
RFFL-204ENST00000414419 FAM159AQ6UWV7 190 aa7.87□□□□□ -1.15
RFFL-204ENST00000414419 C11orf72Q8NBR9 251 aa7.87□□□□□ -1.15
RFFL-204ENST00000414419 NDFIP1Q9BT67 221 aa7.87□□□□□ -1.15
RFFL-204ENST00000414419 TP53TG3Q9ULZ0 132 aa7.87□□□□□ -1.15
RFFL-204ENST00000414419 IGLV2-18A0A075B6J9 118 aa7.86□□□□□ -1.15
RFFL-204ENST00000414419 TRAV26-1A0A087WT03 109 aa7.86□□□□□ -1.15
RFFL-204ENST00000414419 A0A0J9YY99 117 aa7.86□□□□□ -1.15
RFFL-204ENST00000414419 FAM3BP58499 235 aaPredicted RBP7.86□□□□□ -1.15
RFFL-204ENST00000414419 SUMO1P63165 101 aaKnown RBP7.86□□□□□ -1.15
RFFL-204ENST00000414419 GNG5P63218 68 aa7.86□□□□□ -1.15
RFFL-204ENST00000414419 Q6AWC8 147 aa7.86□□□□□ -1.15
RFFL-204ENST00000414419 Q6ZQT7 251 aa7.86□□□□□ -1.15
RFFL-204ENST00000414419 C5orf17Q8NAS9 161 aa7.86□□□□□ -1.15
RFFL-204ENST00000414419 TMPRSS5Q9H3S3 457 aa7.86□□□□□ -1.15
RFFL-204ENST00000414419 TREM1Q9NP99 234 aa7.86□□□□□ -1.15
RFFL-204ENST00000414419 NAGKQ9UJ70 344 aa7.86□□□□□ -1.15
RFFL-204ENST00000414419 KLF12Q9Y4X4 402 aa7.86□□□□□ -1.15
RFFL-204ENST00000414419 TRGV11A0A075B6L2 103 aa7.85□□□□□ -1.15
RFFL-204ENST00000414419 TRAV8-1A0A0A6YYK1 113 aa7.85□□□□□ -1.15
RFFL-204ENST00000414419 TRAV21A0A0B4J279 112 aa7.85□□□□□ -1.15
RFFL-204ENST00000414419 CTXND1A0A1B0GTU2 59 aa7.85□□□□□ -1.15
RFFL-204ENST00000414419 G3V3Q6 166 aa7.85□□□□□ -1.15
RFFL-204ENST00000414419 SMLR1H3BR10 107 aa7.85□□□□□ -1.15
RFFL-204ENST00000414419 SPINK4O60575 86 aa7.85□□□□□ -1.15
RFFL-204ENST00000414419 TCRAP04437 139 aa7.85□□□□□ -1.15
RFFL-204ENST00000414419 LGALS9BQ3B8N2 356 aa7.85□□□□□ -1.15
RFFL-204ENST00000414419 SUN5Q8TC36 379 aa7.85□□□□□ -1.15
RFFL-204ENST00000414419 A0A1W2PRE2 83 aa7.84□□□□□ -1.15
RFFL-204ENST00000414419 F6UZH7 168 aa7.84□□□□□ -1.15
RFFL-204ENST00000414419 HOXA5P20719 270 aa7.84□□□□□ -1.15
RFFL-204ENST00000414419 TMEM183BQ1AE95 376 aa7.84□□□□□ -1.15
RFFL-204ENST00000414419 ZFP69Q49AA0 526 aa7.84□□□□□ -1.15
RFFL-204ENST00000414419 SSX7Q7RTT5 188 aa7.84□□□□□ -1.15
RFFL-204ENST00000414419 TMEM183AQ8IXX5 376 aa7.84□□□□□ -1.15
RFFL-204ENST00000414419 SGK494Q96LW2 274 aa7.84□□□□□ -1.15
RFFL-204ENST00000414419 C18orf15Q96N68 181 aa7.84□□□□□ -1.15
RFFL-204ENST00000414419 SPXQ9BT56 116 aa7.84□□□□□ -1.15
RFFL-204ENST00000414419 MRPL16Q9NX20 251 aaKnown RBP7.84□□□□□ -1.15
RFFL-204ENST00000414419 A0A0D9SG52 128 aa7.83□□□□□ -1.16
RFFL-204ENST00000414419 FBLL1A6NHQ2 334 aaKnown RBP7.83□□□□□ -1.16
RFFL-204ENST00000414419 H3BNG1 76 aa7.83□□□□□ -1.16
RFFL-204ENST00000414419 ZNF345Q14585 488 aa7.83□□□□□ -1.16
RFFL-204ENST00000414419 SOHLH1Q5JUK2 328 aa7.83□□□□□ -1.16
RFFL-204ENST00000414419 LINC00336Q6ZUF6 198 aa7.83□□□□□ -1.16
RFFL-204ENST00000414419 KCNS1Q96KK3 526 aa7.83□□□□□ -1.16
RFFL-204ENST00000414419 NKX6-2Q9C056 277 aaPredicted RBP7.83□□□□□ -1.16
RFFL-204ENST00000414419 CYTL1Q9NRR1 136 aa7.83□□□□□ -1.16
RFFL-204ENST00000414419 EPDR1Q9UM22 224 aa7.83□□□□□ -1.16
RFFL-204ENST00000414419 PSG8Q9UQ74 426 aa7.83□□□□□ -1.16
RFFL-204ENST00000414419 KANTRA0A1W2PQU2 76 aa7.82□□□□□ -1.16
RFFL-204ENST00000414419 HMSDA8MTL9 139 aa7.82□□□□□ -1.16
RFFL-204ENST00000414419 GGTLC3B5MD39 225 aa7.82□□□□□ -1.16
RFFL-204ENST00000414419 IFNA7P01567 189 aa7.82□□□□□ -1.16
RFFL-204ENST00000414419 IGHV3-53P01767 116 aa7.82□□□□□ -1.16
RFFL-204ENST00000414419 PPT1P50897 306 aa7.82□□□□□ -1.16
RFFL-204ENST00000414419 FGF8P55075 233 aaPredicted RBP7.82□□□□□ -1.16
RFFL-204ENST00000414419 UBE2G2P60604 165 aa7.82□□□□□ -1.16
RFFL-204ENST00000414419 FLI1Q01543 452 aaPredicted RBP7.82□□□□□ -1.16
RFFL-204ENST00000414419 SLAQ13239 276 aa7.82□□□□□ -1.16
RFFL-204ENST00000414419 ZNF726P1Q15940 193 aa7.82□□□□□ -1.16
RFFL-204ENST00000414419 TDRG1Q3Y452 100 aa7.82□□□□□ -1.16
RFFL-204ENST00000414419 PRNTQ86SH4 94 aa7.82□□□□□ -1.16
RFFL-204ENST00000414419 KCNRGQ8N5I3 272 aa7.82□□□□□ -1.16
RFFL-204ENST00000414419 CYB561D1Q8N8Q1 229 aa7.82□□□□□ -1.16
RFFL-204ENST00000414419 STOML3Q8TAV4 291 aa7.82□□□□□ -1.16
RFFL-204ENST00000414419 TVP23CQ96ET8 276 aa7.82□□□□□ -1.16
RFFL-204ENST00000414419 SDF2L1Q9HCN8 221 aa7.82□□□□□ -1.16
RFFL-204ENST00000414419 MDFICQ9P1T7 246 aa7.82□□□□□ -1.16
RFFL-204ENST00000414419 MAP1LC3B2A6NCE7 125 aa7.81□□□□□ -1.16
RFFL-204ENST00000414419 PAX4O43316 350 aa7.81□□□□□ -1.16
RFFL-204ENST00000414419 GNRH2O43555 120 aa7.81□□□□□ -1.16
RFFL-204ENST00000414419 EIF5AP63241 154 aaKnown RBP7.81□□□□□ -1.16
RFFL-204ENST00000414419 SMUG1Q53HV7 270 aa7.81□□□□□ -1.16
RFFL-204ENST00000414419 SAPCD1Q5SSQ6 148 aa7.81□□□□□ -1.16
RFFL-204ENST00000414419 TMEM75Q8N9X5 138 aa7.81□□□□□ -1.16
RFFL-204ENST00000414419 C8orf49Q96NF6 230 aa7.81□□□□□ -1.16
RFFL-204ENST00000414419 ZNF471Q9BX82 626 aaPredicted RBP7.81□□□□□ -1.16
RFFL-204ENST00000414419 MAP1LC3BQ9GZQ8 125 aa7.81□□□□□ -1.16
RFFL-204ENST00000414419 LINC00588Q9Y4M8 146 aa7.81□□□□□ -1.16
RFFL-204ENST00000414419 DNAH6Q9C0G6 4158 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms