RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 TRBV7-9A0A0J9YWB2 115 aa18.36■□□□□ 0.53
VEGFA-207ENST00000413642 G3V3Q6 166 aa18.36■□□□□ 0.53
VEGFA-207ENST00000413642 GNG5P63218 68 aa18.36■□□□□ 0.53
VEGFA-207ENST00000413642 Q6ZR54 194 aa18.36■□□□□ 0.53
VEGFA-207ENST00000413642 GOLT1AQ6ZVE7 132 aa18.36■□□□□ 0.53
VEGFA-207ENST00000413642 INO80EQ8NBZ0 244 aaPredicted RBP18.36■□□□□ 0.53
VEGFA-207ENST00000413642 CMTM2Q8TAZ6 248 aa18.36■□□□□ 0.53
VEGFA-207ENST00000413642 ASB13Q8WXK3 278 aa18.36■□□□□ 0.53
VEGFA-207ENST00000413642 RTL8CO15255 209 aa18.35■□□□□ 0.53
VEGFA-207ENST00000413642 STAG3L2P0CL84 134 aa18.35■□□□□ 0.53
VEGFA-207ENST00000413642 STAG3L3P0CL85 134 aa18.35■□□□□ 0.53
VEGFA-207ENST00000413642 TCL1AP56279 114 aa18.35■□□□□ 0.53
VEGFA-207ENST00000413642 GNPNAT1Q96EK6 184 aaPredicted RBP18.34■□□□□ 0.53
VEGFA-207ENST00000413642 TRGV2A0A075B6R0 118 aa18.33■□□□□ 0.52
VEGFA-207ENST00000413642 TRAV8-1A0A0A6YYK1 113 aa18.33■□□□□ 0.52
VEGFA-207ENST00000413642 SPINK4O60575 86 aa18.33■□□□□ 0.52
VEGFA-207ENST00000413642 FAM74A1Q5RGS3 127 aa18.33■□□□□ 0.52
VEGFA-207ENST00000413642 SSX7Q7RTT5 188 aa18.33■□□□□ 0.52
VEGFA-207ENST00000413642 MRPL16Q9NX20 251 aaKnown RBP18.33■□□□□ 0.52
VEGFA-207ENST00000413642 LINC00588Q9Y4M8 146 aa18.33■□□□□ 0.52
VEGFA-207ENST00000413642 GCHFRP30047 84 aa18.32■□□□□ 0.52
VEGFA-207ENST00000413642 IBA57Q5T440 356 aaKnown RBP18.32■□□□□ 0.52
VEGFA-207ENST00000413642 TVP23CQ96ET8 276 aa18.32■□□□□ 0.52
VEGFA-207ENST00000413642 SGK494Q96LW2 274 aa18.32■□□□□ 0.52
VEGFA-207ENST00000413642 ARPC5LQ9BPX5 153 aa18.32■□□□□ 0.52
VEGFA-207ENST00000413642 SMLR1H3BR10 107 aa18.31■□□□□ 0.52
VEGFA-207ENST00000413642 SERF2P84101 59 aa18.31■□□□□ 0.52
VEGFA-207ENST00000413642 MDFICQ9P1T7 246 aa18.31■□□□□ 0.52
VEGFA-207ENST00000413642 Q6AWC8 147 aa18.3■□□□□ 0.52
VEGFA-207ENST00000413642 LINC00336Q6ZUF6 198 aa18.3■□□□□ 0.52
VEGFA-207ENST00000413642 ZNRF2Q8NHG8 242 aa18.3■□□□□ 0.52
VEGFA-207ENST00000413642 TMED6Q8WW62 240 aa18.3■□□□□ 0.52
VEGFA-207ENST00000413642 LENEPQ9Y5L5 61 aa18.3■□□□□ 0.52
VEGFA-207ENST00000413642 F6UZH7 168 aa18.29■□□□□ 0.52
VEGFA-207ENST00000413642 IGHV3-53P01767 116 aa18.29■□□□□ 0.52
VEGFA-207ENST00000413642 MBP02144 154 aa18.29■□□□□ 0.52
VEGFA-207ENST00000413642 CCL18P55774 89 aa18.29■□□□□ 0.52
VEGFA-207ENST00000413642 FAM3BP58499 235 aaPredicted RBP18.29■□□□□ 0.52
VEGFA-207ENST00000413642 SUN5Q8TC36 379 aa18.29■□□□□ 0.52
VEGFA-207ENST00000413642 VSIG2Q96IQ7 327 aa18.29■□□□□ 0.52
VEGFA-207ENST00000413642 C18orf15Q96N68 181 aa18.29■□□□□ 0.52
VEGFA-207ENST00000413642 ACTR3CQ9C0K3 210 aaPredicted RBP18.29■□□□□ 0.52
VEGFA-207ENST00000413642 BORCS7-ASMTA0A0B4J1R7 106 aa18.28■□□□□ 0.52
VEGFA-207ENST00000413642 ST6GAL2Q96JF0 529 aa18.28■□□□□ 0.52
VEGFA-207ENST00000413642 NAGKQ9UJ70 344 aa18.28■□□□□ 0.52
VEGFA-207ENST00000413642 NACAE9PAV3 2078 aa18.27■□□□□ 0.52
VEGFA-207ENST00000413642 PRSS29PA6NIE9 313 aa18.27■□□□□ 0.52
VEGFA-207ENST00000413642 ARPC5O15511 151 aa18.27■□□□□ 0.52
VEGFA-207ENST00000413642 ZNF415Q09FC8 603 aa18.27■□□□□ 0.52
VEGFA-207ENST00000413642 ZNF726P1Q15940 193 aa18.27■□□□□ 0.52
VEGFA-207ENST00000413642 TMEM183BQ1AE95 376 aa18.27■□□□□ 0.52
VEGFA-207ENST00000413642 TMEM183AQ8IXX5 376 aa18.27■□□□□ 0.52
VEGFA-207ENST00000413642 ARL6IP6Q8N6S5 226 aa18.27■□□□□ 0.52
VEGFA-207ENST00000413642 DNAH2Q9P225 4427 aa18.27■□□□□ 0.51
VEGFA-207ENST00000413642 A0A1B0GVY2 172 aa18.26■□□□□ 0.51
VEGFA-207ENST00000413642 CXorf1O96002 111 aa18.25■□□□□ 0.51
VEGFA-207ENST00000413642 TCRAP04437 139 aa18.25■□□□□ 0.51
VEGFA-207ENST00000413642 SUMO1P63165 101 aaKnown RBP18.25■□□□□ 0.51
VEGFA-207ENST00000413642 ESRGQ1W209 222 aa18.25■□□□□ 0.51
VEGFA-207ENST00000413642 FAM159AQ6UWV7 190 aa18.25■□□□□ 0.51
VEGFA-207ENST00000413642 IQCF2Q8IXL9 164 aa18.25■□□□□ 0.51
VEGFA-207ENST00000413642 TREM1Q9NP99 234 aa18.25■□□□□ 0.51
VEGFA-207ENST00000413642 CYTL1Q9NRR1 136 aa18.25■□□□□ 0.51
VEGFA-207ENST00000413642 GGTLC3B5MD39 225 aa18.24■□□□□ 0.51
VEGFA-207ENST00000413642 GNRH2O43555 120 aa18.24■□□□□ 0.51
VEGFA-207ENST00000413642 C5orf17Q8NAS9 161 aa18.24■□□□□ 0.51
VEGFA-207ENST00000413642 NBDYA0A0U1RRE5 68 aa18.23■□□□□ 0.51
VEGFA-207ENST00000413642 H3BNG1 76 aa18.23■□□□□ 0.51
VEGFA-207ENST00000413642 TMEM167BQ9NRX6 74 aa18.23■□□□□ 0.51
VEGFA-207ENST00000413642 DNAH17Q9UFH2 4485 aa18.23■□□□□ 0.51
VEGFA-207ENST00000413642 A0A096LPF7 62 aa18.22■□□□□ 0.51
VEGFA-207ENST00000413642 C1orf134Q5TEV5 83 aa18.22■□□□□ 0.51
VEGFA-207ENST00000413642 C8orf49Q96NF6 230 aa18.22■□□□□ 0.51
VEGFA-207ENST00000413642 FAT2Q9NYQ8 4349 aa18.21■□□□□ 0.51
VEGFA-207ENST00000413642 TRGV11A0A075B6L2 103 aa18.21■□□□□ 0.51
VEGFA-207ENST00000413642 EPDR1Q9UM22 224 aa18.21■□□□□ 0.51
VEGFA-207ENST00000413642 TRAV21A0A0B4J279 112 aa18.2■□□□□ 0.5
VEGFA-207ENST00000413642 IGLV2-11P01706 119 aa18.2■□□□□ 0.5
VEGFA-207ENST00000413642 ZNF80P51504 273 aaPredicted RBP18.2■□□□□ 0.5
VEGFA-207ENST00000413642 FHL2Q14192 279 aa18.2■□□□□ 0.5
VEGFA-207ENST00000413642 TDRG1Q3Y452 100 aa18.2■□□□□ 0.5
VEGFA-207ENST00000413642 PSG8Q9UQ74 426 aa18.2■□□□□ 0.5
VEGFA-207ENST00000413642 IGHV3-16A0A0C4DH30 117 aa18.19■□□□□ 0.5
VEGFA-207ENST00000413642 CTXND1A0A1B0GTU2 59 aa18.19■□□□□ 0.5
VEGFA-207ENST00000413642 SFTA3P0C7M3 94 aa18.19■□□□□ 0.5
VEGFA-207ENST00000413642 FGF8P55075 233 aaPredicted RBP18.19■□□□□ 0.5
VEGFA-207ENST00000413642 Q9H8V8 135 aa18.19■□□□□ 0.5
VEGFA-207ENST00000413642 HECTD4Q9Y4D8 3996 aa18.18■□□□□ 0.5
VEGFA-207ENST00000413642 SERTM2A0A1B0GWG4 89 aa18.18■□□□□ 0.5
VEGFA-207ENST00000413642 TAAR5O14804 337 aa18.18■□□□□ 0.5
VEGFA-207ENST00000413642 PAX4O43316 350 aa18.18■□□□□ 0.5
VEGFA-207ENST00000413642 TYMSP04818 313 aa18.18■□□□□ 0.5
VEGFA-207ENST00000413642 UBE2G2P60604 165 aa18.18■□□□□ 0.5
VEGFA-207ENST00000413642 AKR1C8PQ5T2L2 129 aa18.18■□□□□ 0.5
VEGFA-207ENST00000413642 SPXQ9BT56 116 aa18.18■□□□□ 0.5
VEGFA-207ENST00000413642 C11orf21Q9P2W6 132 aa18.18■□□□□ 0.5
VEGFA-207ENST00000413642 PRNTQ86SH4 94 aa18.17■□□□□ 0.5
VEGFA-207ENST00000413642 OR11H4Q8NGC9 324 aa18.17■□□□□ 0.5
VEGFA-207ENST00000413642 ZNF479Q96JC4 524 aa18.17■□□□□ 0.5
VEGFA-207ENST00000413642 LINC00479Q96M42 142 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms