RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 IL17DQ8TAD2 202 aa13.08□□□□□ -0.32
PAX3-208ENST00000409828 FMC1Q96HJ9 113 aa13.08□□□□□ -0.32
PAX3-208ENST00000409828 LINC01587Q99440 93 aa13.08□□□□□ -0.32
PAX3-208ENST00000409828 TREM1Q9NP99 234 aa13.08□□□□□ -0.32
PAX3-208ENST00000409828 TRAV12-3A0A0B4J271 114 aa13.07□□□□□ -0.32
PAX3-208ENST00000409828 BCL2P10415 239 aa13.07□□□□□ -0.32
PAX3-208ENST00000409828 ZNF493Q6ZR52 646 aa13.07□□□□□ -0.32
PAX3-208ENST00000409828 TVP23CQ96ET8 276 aa13.07□□□□□ -0.32
PAX3-208ENST00000409828 ZFP30Q9Y2G7 519 aa13.07□□□□□ -0.32
PAX3-208ENST00000409828 NDUFS6O75380 124 aaKnown RBP13.06□□□□□ -0.32
PAX3-208ENST00000409828 RNASE4P34096 147 aaKnown RBP13.06□□□□□ -0.32
PAX3-208ENST00000409828 MEF2BQ02080 365 aaPredicted RBP13.06□□□□□ -0.32
PAX3-208ENST00000409828 BTN1A1Q13410 526 aa13.06□□□□□ -0.32
PAX3-208ENST00000409828 TMEM183BQ1AE95 376 aa13.06□□□□□ -0.32
PAX3-208ENST00000409828 PRR9Q5T870 116 aa13.06□□□□□ -0.32
PAX3-208ENST00000409828 COX8CQ7Z4L0 72 aa13.06□□□□□ -0.32
PAX3-208ENST00000409828 C2CD4CQ8TF44 421 aa13.06□□□□□ -0.32
PAX3-208ENST00000409828 C11orf52Q96A22 123 aa13.06□□□□□ -0.32
PAX3-208ENST00000409828 VAX2Q9UIW0 290 aa13.06□□□□□ -0.32
PAX3-208ENST00000409828 TEX48A0A1B0GUV7 120 aa13.05□□□□□ -0.32
PAX3-208ENST00000409828 J3KRW8 73 aa13.05□□□□□ -0.32
PAX3-208ENST00000409828 PDE6DO43924 150 aa13.05□□□□□ -0.32
PAX3-208ENST00000409828 LINC00479Q96M42 142 aa13.05□□□□□ -0.32
PAX3-208ENST00000409828 LOC102723971A0A1B0GUV8 181 aa13.04□□□□□ -0.32
PAX3-208ENST00000409828 AKR1C3P42330 323 aa13.04□□□□□ -0.32
PAX3-208ENST00000409828 UBE2G1P62253 170 aa13.04□□□□□ -0.32
PAX3-208ENST00000409828 ANXA2RQ3ZCQ2 193 aa13.04□□□□□ -0.32
PAX3-208ENST00000409828 PRNTQ86SH4 94 aa13.04□□□□□ -0.32
PAX3-208ENST00000409828 Q86TA4 180 aa13.04□□□□□ -0.32
PAX3-208ENST00000409828 TMEM263Q8WUH6 116 aaKnown RBP13.04□□□□□ -0.32
PAX3-208ENST00000409828 C16orf74Q96GX8 76 aa13.04□□□□□ -0.32
PAX3-208ENST00000409828 SGK494Q96LW2 274 aa13.04□□□□□ -0.32
PAX3-208ENST00000409828 TRAV34A0A0B4J273 112 aa13.03□□□□□ -0.32
PAX3-208ENST00000409828 TRAV21A0A0B4J279 112 aa13.03□□□□□ -0.32
PAX3-208ENST00000409828 ZNF705GA8MUZ8 300 aaPredicted RBP13.03□□□□□ -0.32
PAX3-208ENST00000409828 TDRG1Q3Y452 100 aa13.03□□□□□ -0.32
PAX3-208ENST00000409828 SMUG1Q53HV7 270 aa13.03□□□□□ -0.32
PAX3-208ENST00000409828 EIF4E3Q8N5X7 224 aaKnown RBP13.03□□□□□ -0.32
PAX3-208ENST00000409828 RNASE8Q8TDE3 154 aaKnown RBP13.03□□□□□ -0.32
PAX3-208ENST00000409828 DNAH7Q8WXX0 4024 aa13.02□□□□□ -0.32
PAX3-208ENST00000409828 IGHV1OR15-1A0A075B7D0 117 aa13.02□□□□□ -0.33
PAX3-208ENST00000409828 SCO2A0A1W2PP80 73 aa13.02□□□□□ -0.33
PAX3-208ENST00000409828 LTAP01374 205 aa13.02□□□□□ -0.33
PAX3-208ENST00000409828 RBFOX3A6NFN3 312 aa13.01□□□□□ -0.33
PAX3-208ENST00000409828 RGS13O14921 159 aa13.01□□□□□ -0.33
PAX3-208ENST00000409828 PFN1P07737 140 aaKnown RBP13.01□□□□□ -0.33
PAX3-208ENST00000409828 C11orf45Q8TAV5 145 aa13.01□□□□□ -0.33
PAX3-208ENST00000409828 MUC7Q8TAX7 377 aa13.01□□□□□ -0.33
PAX3-208ENST00000409828 PLAC8L1A1L4L8 177 aa13□□□□□ -0.33
PAX3-208ENST00000409828 LYRM9A8MSI8 78 aa13□□□□□ -0.33
PAX3-208ENST00000409828 C3orf84H3BNL1 204 aa13□□□□□ -0.33
PAX3-208ENST00000409828 DEFB4AO15263 64 aa13□□□□□ -0.33
PAX3-208ENST00000409828 GCGP01275 180 aa13□□□□□ -0.33
PAX3-208ENST00000409828 SPART-AS1P0CW21 52 aa13□□□□□ -0.33
PAX3-208ENST00000409828 AZU1P20160 251 aa13□□□□□ -0.33
PAX3-208ENST00000409828 ZNF506Q5JVG8 444 aa13□□□□□ -0.33
PAX3-208ENST00000409828 IBA57Q5T440 356 aaKnown RBP13□□□□□ -0.33
PAX3-208ENST00000409828 TMEM183AQ8IXX5 376 aa13□□□□□ -0.33
PAX3-208ENST00000409828 C8orf49Q96NF6 230 aa13□□□□□ -0.33
PAX3-208ENST00000409828 DKK2Q9UBU2 259 aa13□□□□□ -0.33
PAX3-208ENST00000409828 TP53TG3Q9ULZ0 132 aa13□□□□□ -0.33
PAX3-208ENST00000409828 TMEM250H0YL14 139 aa12.99□□□□□ -0.33
PAX3-208ENST00000409828 HTN1P15515 57 aa12.99□□□□□ -0.33
PAX3-208ENST00000409828 FAM159AQ6UWV7 190 aa12.99□□□□□ -0.33
PAX3-208ENST00000409828 SMIM12Q96EX1 92 aa12.99□□□□□ -0.33
PAX3-208ENST00000409828 KCNS1Q96KK3 526 aa12.99□□□□□ -0.33
PAX3-208ENST00000409828 FAM210AQ96ND0 272 aa12.99□□□□□ -0.33
PAX3-208ENST00000409828 CXorf65A6NEN9 183 aa12.98□□□□□ -0.33
PAX3-208ENST00000409828 FABP5P3A8MUU1 101 aa12.98□□□□□ -0.33
PAX3-208ENST00000409828 RPL35P42766 123 aaKnown RBP12.98□□□□□ -0.33
PAX3-208ENST00000409828 DAZ2Q13117 558 aaKnown RBP12.98□□□□□ -0.33
PAX3-208ENST00000409828 ZNF767PQ75MW2 155 aa12.98□□□□□ -0.33
PAX3-208ENST00000409828 MLST8Q9BVC4 326 aa12.98□□□□□ -0.33
PAX3-208ENST00000409828 TIMM8BQ9Y5J9 83 aaPredicted RBP12.98□□□□□ -0.33
PAX3-208ENST00000409828 CBY3A6NI87 242 aa12.97□□□□□ -0.33
PAX3-208ENST00000409828 PRM2P04554 102 aa12.97□□□□□ -0.33
PAX3-208ENST00000409828 ZNF80P51504 273 aaPredicted RBP12.97□□□□□ -0.33
PAX3-208ENST00000409828 Q6ZQT7 251 aa12.97□□□□□ -0.33
PAX3-208ENST00000409828 BAGE2Q86Y30 109 aa12.97□□□□□ -0.33
PAX3-208ENST00000409828 MED9Q9NWA0 146 aa12.97□□□□□ -0.33
PAX3-208ENST00000409828 TRGV11A0A075B6L2 103 aa12.96□□□□□ -0.33
PAX3-208ENST00000409828 SNURFLB1AK76 121 aa12.96□□□□□ -0.33
PAX3-208ENST00000409828 EMP1P54849 157 aa12.96□□□□□ -0.33
PAX3-208ENST00000409828 FAM222AQ5U5X8 452 aa12.96□□□□□ -0.33
PAX3-208ENST00000409828 C11orf72Q8NBR9 251 aa12.96□□□□□ -0.33
PAX3-208ENST00000409828 SMDT1Q9H4I9 107 aa12.96□□□□□ -0.33
PAX3-208ENST00000409828 TCL1AP56279 114 aa12.95□□□□□ -0.34
PAX3-208ENST00000409828 RAB14P61106 215 aa12.95□□□□□ -0.34
PAX3-208ENST00000409828 ZNF674Q2M3X9 581 aa12.95□□□□□ -0.34
PAX3-208ENST00000409828 FAM162BQ5T6X4 162 aa12.95□□□□□ -0.34
PAX3-208ENST00000409828 ZC2HC1AQ96GY0 325 aa12.95□□□□□ -0.34
PAX3-208ENST00000409828 EIF5A2Q9GZV4 153 aaKnown RBP12.95□□□□□ -0.34
PAX3-208ENST00000409828 CELA1Q9UNI1 258 aa12.95□□□□□ -0.34
PAX3-208ENST00000409828 CSMD3Q7Z407 3707 aa12.94□□□□□ -0.34
PAX3-208ENST00000409828 C12orf74Q32Q52 190 aa12.94□□□□□ -0.34
PAX3-208ENST00000409828 TOR2AQ5JU69 321 aa12.94□□□□□ -0.34
PAX3-208ENST00000409828 MUC21Q5SSG8 566 aa12.94□□□□□ -0.34
PAX3-208ENST00000409828 LINC00612Q8N6U2 182 aa12.94□□□□□ -0.34
PAX3-208ENST00000409828 DERL1Q9BUN8 251 aa12.94□□□□□ -0.34
PAX3-208ENST00000409828 SDF2L1Q9HCN8 221 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms