RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 IGLV2-14P01704 120 aa14.03□□□□□ -0.16
SMPD4-202ENST00000409031 EGR2P11161 476 aaPredicted RBP14.03□□□□□ -0.16
SMPD4-202ENST00000409031 LYPD2Q6UXB3 125 aa14.03□□□□□ -0.16
SMPD4-202ENST00000409031 PAX4O43316 350 aa14.02□□□□□ -0.16
SMPD4-202ENST00000409031 PATE2Q6UY27 113 aa14.02□□□□□ -0.16
SMPD4-202ENST00000409031 GP9P14770 177 aa14.02□□□□□ -0.16
SMPD4-202ENST00000409031 DENND4CQ5VZ89 1909 aa14.02□□□□□ -0.17
SMPD4-202ENST00000409031 ZNF491Q8N8L2 437 aa14.02□□□□□ -0.17
SMPD4-202ENST00000409031 NCOA6Q14686 2063 aaPredicted RBP14.02□□□□□ -0.17
SMPD4-202ENST00000409031 TMEM126AQ9H061 195 aa14.02□□□□□ -0.17
SMPD4-202ENST00000409031 EP300Q09472 2414 aaPredicted RBP14.01□□□□□ -0.17
SMPD4-202ENST00000409031 A0A1B0GXF2 115 aa14.01□□□□□ -0.17
SMPD4-202ENST00000409031 MBD3L4A6NDZ8 208 aaPredicted RBP14.01□□□□□ -0.17
SMPD4-202ENST00000409031 MBD3L3A6NE82 208 aaPredicted RBP14.01□□□□□ -0.17
SMPD4-202ENST00000409031 MBD3L5A6NJ08 208 aaPredicted RBP14.01□□□□□ -0.17
SMPD4-202ENST00000409031 ACYP1P07311 99 aa14.01□□□□□ -0.17
SMPD4-202ENST00000409031 MBD3L2Q8NHZ7 208 aaPredicted RBP14.01□□□□□ -0.17
SMPD4-202ENST00000409031 ITLN2Q8WWU7 325 aaPredicted RBP14.01□□□□□ -0.17
SMPD4-202ENST00000409031 NDUFA12Q9UI09 145 aa14.01□□□□□ -0.17
SMPD4-202ENST00000409031 NCOR1O75376 2440 aa14.01□□□□□ -0.17
SMPD4-202ENST00000409031 ZNF672Q499Z4 452 aaPredicted RBP14.01□□□□□ -0.17
SMPD4-202ENST00000409031 M0R1W7 72 aa14.01□□□□□ -0.17
SMPD4-202ENST00000409031 ZNF295-AS1Q8N0V1 137 aa14.01□□□□□ -0.17
SMPD4-202ENST00000409031 SOCS3O14543 225 aa14.01□□□□□ -0.17
SMPD4-202ENST00000409031 ZNF493Q6ZR52 646 aa14.01□□□□□ -0.17
SMPD4-202ENST00000409031 TTTY13Q9BZ97 58 aa14.01□□□□□ -0.17
SMPD4-202ENST00000409031 TPSG1Q9NRR2 321 aa14.01□□□□□ -0.17
SMPD4-202ENST00000409031 C11orf53Q8IXP5 236 aa13.99□□□□□ -0.17
SMPD4-202ENST00000409031 C17orf77Q96MU5 243 aa13.99□□□□□ -0.17
SMPD4-202ENST00000409031 ARFGEF3Q5TH69 2177 aa13.99□□□□□ -0.17
SMPD4-202ENST00000409031 P0C879 139 aa13.99□□□□□ -0.17
SMPD4-202ENST00000409031 TRGV2A0A075B6R0 118 aa13.99□□□□□ -0.17
SMPD4-202ENST00000409031 EML6Q6ZMW3 1958 aa13.99□□□□□ -0.17
SMPD4-202ENST00000409031 DUX4L9Q6RFH8 374 aaPredicted RBP13.98□□□□□ -0.17
SMPD4-202ENST00000409031 KMT2EQ8IZD2 1858 aa13.98□□□□□ -0.17
SMPD4-202ENST00000409031 IGHV1-69DA0A0B4J2H0 117 aa13.97□□□□□ -0.17
SMPD4-202ENST00000409031 UCNP55089 124 aa13.97□□□□□ -0.17
SMPD4-202ENST00000409031 TEX36Q5VZQ5 186 aa13.97□□□□□ -0.17
SMPD4-202ENST00000409031 IGLV2-8P01709 118 aa13.97□□□□□ -0.17
SMPD4-202ENST00000409031 RPL36AP83881 106 aaKnown RBP13.97□□□□□ -0.17
SMPD4-202ENST00000409031 RPL36ALQ969Q0 106 aaKnown RBP13.97□□□□□ -0.17
SMPD4-202ENST00000409031 IGKV1OR2-108A0A075B7D4 117 aa13.97□□□□□ -0.17
SMPD4-202ENST00000409031 C19orf71A6NCJ1 209 aa13.97□□□□□ -0.17
SMPD4-202ENST00000409031 I3L3M4 83 aa13.97□□□□□ -0.17
SMPD4-202ENST00000409031 TMEM105Q8N8V8 129 aa13.97□□□□□ -0.17
SMPD4-202ENST00000409031 LINC00527Q9UJ94 153 aa13.97□□□□□ -0.17
SMPD4-202ENST00000409031 ODF1Q14990 250 aa13.96□□□□□ -0.17
SMPD4-202ENST00000409031 C3orf36Q3SXR2 165 aa13.96□□□□□ -0.17
SMPD4-202ENST00000409031 ZNF625Q96I27 306 aaPredicted RBP13.96□□□□□ -0.17
SMPD4-202ENST00000409031 IGLV1-44P01699 117 aa13.96□□□□□ -0.18
SMPD4-202ENST00000409031 GATA1P15976 413 aaPredicted RBP13.96□□□□□ -0.18
SMPD4-202ENST00000409031 IGHV3-73A0A0B4J1V6 119 aa13.95□□□□□ -0.18
SMPD4-202ENST00000409031 FAM110DQ8TAY7 271 aaPredicted RBP13.95□□□□□ -0.18
SMPD4-202ENST00000409031 USMG5Q96IX5 58 aa13.95□□□□□ -0.18
SMPD4-202ENST00000409031 FAM223BA6NKX1 122 aa13.95□□□□□ -0.18
SMPD4-202ENST00000409031 THBDP07204 575 aa13.95□□□□□ -0.18
SMPD4-202ENST00000409031 FAM223AQ8IWN6 122 aa13.95□□□□□ -0.18
SMPD4-202ENST00000409031 ZNF415Q09FC8 603 aa13.95□□□□□ -0.18
SMPD4-202ENST00000409031 C1orf159Q96HA4 380 aa13.95□□□□□ -0.18
SMPD4-202ENST00000409031 RHPN1-AS1Q9BWJ2 59 aa13.95□□□□□ -0.18
SMPD4-202ENST00000409031 TRAV12-1A0A0B4J245 112 aa13.94□□□□□ -0.18
SMPD4-202ENST00000409031 LINC01620Q4KN68 170 aa13.94□□□□□ -0.18
SMPD4-202ENST00000409031 DTX1Q86Y01 620 aa13.94□□□□□ -0.18
SMPD4-202ENST00000409031 MALRD1Q5VYJ5 2156 aa13.94□□□□□ -0.18
SMPD4-202ENST00000409031 LOXP28300 417 aaPredicted RBP13.94□□□□□ -0.18
SMPD4-202ENST00000409031 PRSS47A8MTI9 375 aa13.94□□□□□ -0.18
SMPD4-202ENST00000409031 DKK1O94907 266 aa13.94□□□□□ -0.18
SMPD4-202ENST00000409031 CR1LQ2VPA4 569 aa13.94□□□□□ -0.18
SMPD4-202ENST00000409031 C8orf31Q8N9H6 132 aa13.94□□□□□ -0.18
SMPD4-202ENST00000409031 RNF183Q96D59 192 aa13.94□□□□□ -0.18
SMPD4-202ENST00000409031 PRSS22Q9GZN4 317 aa13.94□□□□□ -0.18
SMPD4-202ENST00000409031 PEMTQ9UBM1 199 aa13.94□□□□□ -0.18
SMPD4-202ENST00000409031 GDF5OSQ5U4N7 250 aa13.93□□□□□ -0.18
SMPD4-202ENST00000409031 Q6ZUT4 128 aa13.93□□□□□ -0.18
SMPD4-202ENST00000409031 MBD6Q96DN6 1003 aa13.93□□□□□ -0.18
SMPD4-202ENST00000409031 SPANXB1Q9NS25 103 aaPredicted RBP13.93□□□□□ -0.18
SMPD4-202ENST00000409031 LAMTOR3Q9UHA4 124 aa13.93□□□□□ -0.18
SMPD4-202ENST00000409031 ATP5J2P56134 94 aa13.93□□□□□ -0.18
SMPD4-202ENST00000409031 ZNF503Q96F45 646 aa13.93□□□□□ -0.18
SMPD4-202ENST00000409031 KIAA1671Q9BY89 1806 aa13.93□□□□□ -0.18
SMPD4-202ENST00000409031 GTF3C1Q12789 2109 aa13.93□□□□□ -0.18
SMPD4-202ENST00000409031 THADAQ6YHU6 1953 aa13.93□□□□□ -0.18
SMPD4-202ENST00000409031 IGLV3-9A0A075B6K5 115 aa13.93□□□□□ -0.18
SMPD4-202ENST00000409031 TRBV6-1A0A0K0K1D8 114 aa13.93□□□□□ -0.18
SMPD4-202ENST00000409031 E9PLD3 99 aa13.93□□□□□ -0.18
SMPD4-202ENST00000409031 CRIP3Q6Q6R5 217 aa13.93□□□□□ -0.18
SMPD4-202ENST00000409031 Q6ZPA2 131 aa13.93□□□□□ -0.18
SMPD4-202ENST00000409031 TNRC6AQ8NDV7 1962 aaKnown RBP13.92□□□□□ -0.18
SMPD4-202ENST00000409031 TRAV13-1A0A0B4J241 112 aa13.92□□□□□ -0.18
SMPD4-202ENST00000409031 RBAKDNA6NC62 111 aa13.92□□□□□ -0.18
SMPD4-202ENST00000409031 INS-IGF2F8WCM5 200 aa13.92□□□□□ -0.18
SMPD4-202ENST00000409031 THSD7BQ9C0I4 1608 aa13.92□□□□□ -0.18
SMPD4-202ENST00000409031 CHCHD5Q9BSY4 110 aa13.92□□□□□ -0.18
SMPD4-202ENST00000409031 JPT2Q9H910 190 aa13.92□□□□□ -0.18
SMPD4-202ENST00000409031 LENEPQ9Y5L5 61 aa13.92□□□□□ -0.18
SMPD4-202ENST00000409031 C22orf46C9J442 243 aa13.91□□□□□ -0.18
SMPD4-202ENST00000409031 DIAPH2-AS1Q14236 149 aa13.91□□□□□ -0.18
SMPD4-202ENST00000409031 C7orf69Q9H7B7 122 aa13.91□□□□□ -0.18
SMPD4-202ENST00000409031 MSRB1Q9NZV6 116 aa13.91□□□□□ -0.18
SMPD4-202ENST00000409031 NOTCH4Q99466 2003 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms