RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 LMO1P25800 156 aa6.99□□□□□ -1.29
CACNA1C-220ENST00000399655 SNED1Q8TER0 1413 aa6.99□□□□□ -1.29
CACNA1C-220ENST00000399655 SRSF7Q16629 238 aaKnown RBP eCLIP6.99□□□□□ -1.29
CACNA1C-220ENST00000399655 SDHAF1A6NFY7 115 aa6.99□□□□□ -1.29
CACNA1C-220ENST00000399655 CTGFP29279 349 aa6.99□□□□□ -1.29
CACNA1C-220ENST00000399655 SND1-IT1Q9HBX3 110 aa6.99□□□□□ -1.29
CACNA1C-220ENST00000399655 A0A0G2JNJ9 132 aa6.98□□□□□ -1.29
CACNA1C-220ENST00000399655 FOXI2Q6ZQN5 318 aa6.98□□□□□ -1.29
CACNA1C-220ENST00000399655 Q9UFV3 132 aa6.98□□□□□ -1.29
CACNA1C-220ENST00000399655 C15orf62A8K5M9 175 aa6.98□□□□□ -1.29
CACNA1C-220ENST00000399655 FAM231DQ6ZW35 169 aa6.98□□□□□ -1.29
CACNA1C-220ENST00000399655 DEFB123Q8N688 67 aa6.98□□□□□ -1.29
CACNA1C-220ENST00000399655 FAM19A3Q7Z5A8 133 aa6.98□□□□□ -1.29
CACNA1C-220ENST00000399655 CAMK2N2Q96S95 79 aa6.98□□□□□ -1.29
CACNA1C-220ENST00000399655 ITGB4P16144 1822 aa6.98□□□□□ -1.29
CACNA1C-220ENST00000399655 COL22A1Q8NFW1 1626 aaPredicted RBP6.98□□□□□ -1.29
CACNA1C-220ENST00000399655 FAM181AQ8N9Y4 354 aa6.98□□□□□ -1.29
CACNA1C-220ENST00000399655 C8orf49Q96NF6 230 aa6.98□□□□□ -1.29
CACNA1C-220ENST00000399655 LTBP4Q8N2S1 1624 aa6.98□□□□□ -1.29
CACNA1C-220ENST00000399655 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.98□□□□□ -1.29
CACNA1C-220ENST00000399655 DEFB103AP81534 67 aa6.98□□□□□ -1.29
CACNA1C-220ENST00000399655 EXOC3-AS1Q8N2X6 119 aa6.98□□□□□ -1.29
CACNA1C-220ENST00000399655 IGKV1-5P01602 117 aa6.98□□□□□ -1.29
CACNA1C-220ENST00000399655 KLHL30-AS1Q8NEE0 82 aa6.97□□□□□ -1.29
CACNA1C-220ENST00000399655 IGHV2-26A0A0B4J1V2 119 aa6.97□□□□□ -1.29
CACNA1C-220ENST00000399655 MLST8Q9BVC4 326 aa6.97□□□□□ -1.29
CACNA1C-220ENST00000399655 NUP210LQ5VU65 1888 aa6.97□□□□□ -1.29
CACNA1C-220ENST00000399655 IGHV3OR16-8A0A075B7F1 116 aa6.97□□□□□ -1.29
CACNA1C-220ENST00000399655 ALKAL1Q6UXT8 129 aa6.97□□□□□ -1.29
CACNA1C-220ENST00000399655 BLCAPP62952 87 aa6.97□□□□□ -1.29
CACNA1C-220ENST00000399655 NDUFA7O95182 113 aa6.97□□□□□ -1.29
CACNA1C-220ENST00000399655 MSRB2Q9Y3D2 182 aa6.97□□□□□ -1.29
CACNA1C-220ENST00000399655 IGHV3OR16-10A0A075B7F0 116 aa6.97□□□□□ -1.29
CACNA1C-220ENST00000399655 LINC00271P0C7V0 271 aa6.97□□□□□ -1.29
CACNA1C-220ENST00000399655 DEFB112Q30KQ8 113 aa6.97□□□□□ -1.29
CACNA1C-220ENST00000399655 Q9H8V8 135 aa6.97□□□□□ -1.29
CACNA1C-220ENST00000399655 C12orf77C9JDV5 145 aa6.97□□□□□ -1.29
CACNA1C-220ENST00000399655 IGLV3-27P01718 113 aa6.97□□□□□ -1.29
CACNA1C-220ENST00000399655 DAZ2Q13117 558 aaKnown RBP6.97□□□□□ -1.29
CACNA1C-220ENST00000399655 DAZ4Q86SG3 579 aaKnown RBP6.97□□□□□ -1.29
CACNA1C-220ENST00000399655 DAZ3Q9NR90 486 aaKnown RBP6.97□□□□□ -1.29
CACNA1C-220ENST00000399655 NDUFA1O15239 70 aa6.97□□□□□ -1.29
CACNA1C-220ENST00000399655 C8orf86Q6ZUL3 223 aa6.97□□□□□ -1.29
CACNA1C-220ENST00000399655 C17orf98A8MV24 154 aa6.96□□□□□ -1.29
CACNA1C-220ENST00000399655 LGALS9O00182 355 aa6.96□□□□□ -1.29
CACNA1C-220ENST00000399655 LHFPL6Q9Y693 200 aa6.96□□□□□ -1.29
CACNA1C-220ENST00000399655 BCORQ6W2J9 1755 aa6.96□□□□□ -1.29
CACNA1C-220ENST00000399655 TNRC6CQ9HCJ0 1690 aaKnown RBP6.96□□□□□ -1.29
CACNA1C-220ENST00000399655 IGLV3-16A0A075B6K0 115 aa6.96□□□□□ -1.29
CACNA1C-220ENST00000399655 C2CD4DB7Z1M9 353 aa6.96□□□□□ -1.29
CACNA1C-220ENST00000399655 ZNF362Q5T0B9 420 aaPredicted RBP6.96□□□□□ -1.3
CACNA1C-220ENST00000399655 SMIM14Q96QK8 99 aa6.96□□□□□ -1.3
CACNA1C-220ENST00000399655 CD59P13987 128 aa6.96□□□□□ -1.3
CACNA1C-220ENST00000399655 PLCH1Q4KWH8 1693 aa6.96□□□□□ -1.3
CACNA1C-220ENST00000399655 NDUFS7O75251 213 aa6.96□□□□□ -1.3
CACNA1C-220ENST00000399655 CD55P08174 381 aa6.96□□□□□ -1.3
CACNA1C-220ENST00000399655 C5orf64Q2M2E5 130 aa6.96□□□□□ -1.3
CACNA1C-220ENST00000399655 Q86TA4 180 aa6.96□□□□□ -1.3
CACNA1C-220ENST00000399655 KDM3BQ7LBC6 1761 aa6.96□□□□□ -1.3
CACNA1C-220ENST00000399655 CRYGNQ8WXF5 182 aa6.96□□□□□ -1.3
CACNA1C-220ENST00000399655 GATA3P23771 443 aa6.96□□□□□ -1.3
CACNA1C-220ENST00000399655 XCL1P47992 114 aa6.96□□□□□ -1.3
CACNA1C-220ENST00000399655 SPAG11BQ08648 103 aa6.96□□□□□ -1.3
CACNA1C-220ENST00000399655 WFDC12Q8WWY7 111 aa6.96□□□□□ -1.3
CACNA1C-220ENST00000399655 SMIM26A0A096LP01 95 aa6.95□□□□□ -1.3
CACNA1C-220ENST00000399655 K7ERJ3 54 aa6.95□□□□□ -1.3
CACNA1C-220ENST00000399655 NDUFS6O75380 124 aaKnown RBP6.95□□□□□ -1.3
CACNA1C-220ENST00000399655 BSPH1Q075Z2 132 aa6.95□□□□□ -1.3
CACNA1C-220ENST00000399655 SP7Q8TDD2 431 aaPredicted RBP6.95□□□□□ -1.3
CACNA1C-220ENST00000399655 CCL4P13236 92 aa6.95□□□□□ -1.3
CACNA1C-220ENST00000399655 GATA1P15976 413 aaPredicted RBP6.95□□□□□ -1.3
CACNA1C-220ENST00000399655 PIP4P2Q8N4L2 257 aa6.95□□□□□ -1.3
CACNA1C-220ENST00000399655 ARID2Q68CP9 1835 aa6.95□□□□□ -1.3
CACNA1C-220ENST00000399655 ZNF497Q6ZNH5 498 aa6.95□□□□□ -1.3
CACNA1C-220ENST00000399655 TRAV26-1A0A087WT03 109 aa6.95□□□□□ -1.3
CACNA1C-220ENST00000399655 NPSP0C0P6 89 aa6.95□□□□□ -1.3
CACNA1C-220ENST00000399655 C9orf85Q96MD7 179 aa6.95□□□□□ -1.3
CACNA1C-220ENST00000399655 FOXI1Q12951 378 aa6.95□□□□□ -1.3
CACNA1C-220ENST00000399655 IGHV1-8P0DP01 117 aa6.95□□□□□ -1.3
CACNA1C-220ENST00000399655 TLN1Q9Y490 2541 aaKnown RBP6.95□□□□□ -1.3
CACNA1C-220ENST00000399655 C20orf204Q6ZNR8 217 aa6.95□□□□□ -1.3
CACNA1C-220ENST00000399655 KIDINS220Q9ULH0 1771 aa6.94□□□□□ -1.3
CACNA1C-220ENST00000399655 COLCA2A8K830 154 aa6.94□□□□□ -1.3
CACNA1C-220ENST00000399655 CCL18P55774 89 aa6.94□□□□□ -1.3
CACNA1C-220ENST00000399655 LY6G6FQ5SQ64 297 aa6.94□□□□□ -1.3
CACNA1C-220ENST00000399655 TEX49A0A1B0GTD5 131 aa6.94□□□□□ -1.3
CACNA1C-220ENST00000399655 IGHV4-59P01825 116 aa6.94□□□□□ -1.3
CACNA1C-220ENST00000399655 GZMMP51124 257 aa6.94□□□□□ -1.3
CACNA1C-220ENST00000399655 TRBV6-7A0A0A0MS04 114 aa6.94□□□□□ -1.3
CACNA1C-220ENST00000399655 IGHV5-10-1A0A0J9YXX1 117 aa6.94□□□□□ -1.3
CACNA1C-220ENST00000399655 CXCL1P09341 107 aa6.94□□□□□ -1.3
CACNA1C-220ENST00000399655 CXCL6P80162 114 aa6.94□□□□□ -1.3
CACNA1C-220ENST00000399655 MORN2Q502X0 79 aa6.94□□□□□ -1.3
CACNA1C-220ENST00000399655 C20orf197Q8N268 126 aa6.94□□□□□ -1.3
CACNA1C-220ENST00000399655 POLR3KQ9Y2Y1 108 aaPredicted RBP6.94□□□□□ -1.3
CACNA1C-220ENST00000399655 FGF16O43320 207 aa6.93□□□□□ -1.3
CACNA1C-220ENST00000399655 C17orf100A8MU93 164 aa6.93□□□□□ -1.3
CACNA1C-220ENST00000399655 LAIR2Q6ISS4 152 aa6.93□□□□□ -1.3
CACNA1C-220ENST00000399655 DEPPQ9NTK1 212 aa6.93□□□□□ -1.3
CACNA1C-220ENST00000399655 ANKHD1Q8IWZ3 2542 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms