RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 HSD17B11Q8NBQ5 300 aa10.38□□□□□ -0.75
SMIM11A-203ENST00000399299 CMTM2Q8TAZ6 248 aa10.38□□□□□ -0.75
SMIM11A-203ENST00000399299 GNPNAT1Q96EK6 184 aaPredicted RBP10.38□□□□□ -0.75
SMIM11A-203ENST00000399299 PGPA6NDG6 321 aa10.37□□□□□ -0.75
SMIM11A-203ENST00000399299 SPINK4O60575 86 aa10.37□□□□□ -0.75
SMIM11A-203ENST00000399299 MBP02144 154 aa10.37□□□□□ -0.75
SMIM11A-203ENST00000399299 STAG3L2P0CL84 134 aa10.37□□□□□ -0.75
SMIM11A-203ENST00000399299 STAG3L3P0CL85 134 aa10.37□□□□□ -0.75
SMIM11A-203ENST00000399299 ARL14EPLP0DKL9 152 aa10.37□□□□□ -0.75
SMIM11A-203ENST00000399299 CDC34P49427 236 aaPredicted RBP10.37□□□□□ -0.75
SMIM11A-203ENST00000399299 Q6AWC8 147 aa10.37□□□□□ -0.75
SMIM11A-203ENST00000399299 INO80EQ8NBZ0 244 aaPredicted RBP10.37□□□□□ -0.75
SMIM11A-203ENST00000399299 HYLS1Q96M11 299 aa10.37□□□□□ -0.75
SMIM11A-203ENST00000399299 MUC4Q99102 2169 aa10.37□□□□□ -0.75
SMIM11A-203ENST00000399299 ARPC5LQ9BPX5 153 aa10.37□□□□□ -0.75
SMIM11A-203ENST00000399299 TMPRSS5Q9H3S3 457 aa10.37□□□□□ -0.75
SMIM11A-203ENST00000399299 KLF12Q9Y4X4 402 aa10.37□□□□□ -0.75
SMIM11A-203ENST00000399299 TRGV2A0A075B6R0 118 aa10.36□□□□□ -0.75
SMIM11A-203ENST00000399299 TRGV1A0A0A0MS02 117 aa10.36□□□□□ -0.75
SMIM11A-203ENST00000399299 RNF222A6NCQ9 220 aa10.36□□□□□ -0.75
SMIM11A-203ENST00000399299 RGS21Q2M5E4 152 aa10.36□□□□□ -0.75
SMIM11A-203ENST00000399299 Q6ZQT7 251 aa10.36□□□□□ -0.75
SMIM11A-203ENST00000399299 ZNRF2Q8NHG8 242 aa10.36□□□□□ -0.75
SMIM11A-203ENST00000399299 A0A1B0GVY2 172 aa10.35□□□□□ -0.75
SMIM11A-203ENST00000399299 PRSS29PA6NIE9 313 aa10.35□□□□□ -0.75
SMIM11A-203ENST00000399299 HMGB3O15347 200 aaKnown RBP10.35□□□□□ -0.75
SMIM11A-203ENST00000399299 ZNF415Q09FC8 603 aa10.35□□□□□ -0.75
SMIM11A-203ENST00000399299 SOHLH1Q5JUK2 328 aa10.35□□□□□ -0.75
SMIM11A-203ENST00000399299 OR2T35Q8NGX2 323 aa10.35□□□□□ -0.75
SMIM11A-203ENST00000399299 SUN5Q8TC36 379 aa10.35□□□□□ -0.75
SMIM11A-203ENST00000399299 RAB24Q969Q5 203 aa10.35□□□□□ -0.75
SMIM11A-203ENST00000399299 ST6GAL2Q96JF0 529 aa10.35□□□□□ -0.75
SMIM11A-203ENST00000399299 TP53TG3Q9ULZ0 132 aa10.35□□□□□ -0.75
SMIM11A-203ENST00000399299 TNFSF18Q9UNG2 199 aa10.35□□□□□ -0.75
SMIM11A-203ENST00000399299 LINC00588Q9Y4M8 146 aa10.35□□□□□ -0.75
SMIM11A-203ENST00000399299 FXYD6-FXYD2A0A087WZ82 144 aa10.34□□□□□ -0.75
SMIM11A-203ENST00000399299 SERTM2A0A1B0GWG4 89 aa10.34□□□□□ -0.75
SMIM11A-203ENST00000399299 GOLT1AQ6ZVE7 132 aa10.34□□□□□ -0.75
SMIM11A-203ENST00000399299 SH3BGRL3Q9H299 93 aa10.34□□□□□ -0.75
SMIM11A-203ENST00000399299 RPH3ALQ9UNE2 315 aa10.34□□□□□ -0.75
SMIM11A-203ENST00000399299 PKD1P98161 4303 aa10.33□□□□□ -0.76
SMIM11A-203ENST00000399299 A0A0J9YY99 117 aa10.33□□□□□ -0.76
SMIM11A-203ENST00000399299 NBDYA0A0U1RRE5 68 aa10.33□□□□□ -0.76
SMIM11A-203ENST00000399299 GCHFRP30047 84 aa10.33□□□□□ -0.76
SMIM11A-203ENST00000399299 TDRG1Q3Y452 100 aa10.33□□□□□ -0.76
SMIM11A-203ENST00000399299 C1orf134Q5TEV5 83 aa10.33□□□□□ -0.76
SMIM11A-203ENST00000399299 FAM159AQ6UWV7 190 aa10.33□□□□□ -0.76
SMIM11A-203ENST00000399299 SSX7Q7RTT5 188 aa10.33□□□□□ -0.76
SMIM11A-203ENST00000399299 C5orf17Q8NAS9 161 aa10.33□□□□□ -0.76
SMIM11A-203ENST00000399299 ACTR3CQ9C0K3 210 aaPredicted RBP10.33□□□□□ -0.76
SMIM11A-203ENST00000399299 TRGV11A0A075B6L2 103 aa10.32□□□□□ -0.76
SMIM11A-203ENST00000399299 BORCS7-ASMTA0A0B4J1R7 106 aa10.32□□□□□ -0.76
SMIM11A-203ENST00000399299 G3V3Q6 166 aa10.32□□□□□ -0.76
SMIM11A-203ENST00000399299 CXorf1O96002 111 aa10.32□□□□□ -0.76
SMIM11A-203ENST00000399299 MUC21Q5SSG8 566 aa10.32□□□□□ -0.76
SMIM11A-203ENST00000399299 RPL7L1Q6DKI1 246 aaKnown RBP10.32□□□□□ -0.76
SMIM11A-203ENST00000399299 VSIG2Q96IQ7 327 aa10.32□□□□□ -0.76
SMIM11A-203ENST00000399299 SPXQ9BT56 116 aa10.32□□□□□ -0.76
SMIM11A-203ENST00000399299 UPK3BQ9BT76 320 aa10.32□□□□□ -0.76
SMIM11A-203ENST00000399299 TMEM167BQ9NRX6 74 aa10.32□□□□□ -0.76
SMIM11A-203ENST00000399299 TRAV8-1A0A0A6YYK1 113 aa10.31□□□□□ -0.76
SMIM11A-203ENST00000399299 TRAV21A0A0B4J279 112 aa10.31□□□□□ -0.76
SMIM11A-203ENST00000399299 GNG5P63218 68 aa10.31□□□□□ -0.76
SMIM11A-203ENST00000399299 TREM1Q9NP99 234 aa10.31□□□□□ -0.76
SMIM11A-203ENST00000399299 MRPL16Q9NX20 251 aaKnown RBP10.31□□□□□ -0.76
SMIM11A-203ENST00000399299 MDFICQ9P1T7 246 aa10.31□□□□□ -0.76
SMIM11A-203ENST00000399299 A0A096LPF7 62 aa10.3□□□□□ -0.76
SMIM11A-203ENST00000399299 K7EQM0 130 aa10.3□□□□□ -0.76
SMIM11A-203ENST00000399299 TAAR5O14804 337 aa10.3□□□□□ -0.76
SMIM11A-203ENST00000399299 TCRAP04437 139 aa10.3□□□□□ -0.76
SMIM11A-203ENST00000399299 SLAQ13239 276 aa10.3□□□□□ -0.76
SMIM11A-203ENST00000399299 TMEM183BQ1AE95 376 aa10.3□□□□□ -0.76
SMIM11A-203ENST00000399299 ESRGQ1W209 222 aa10.3□□□□□ -0.76
SMIM11A-203ENST00000399299 TMEM183AQ8IXX5 376 aa10.3□□□□□ -0.76
SMIM11A-203ENST00000399299 TVP23CQ96ET8 276 aa10.3□□□□□ -0.76
SMIM11A-203ENST00000399299 NDFIP1Q9BT67 221 aa10.3□□□□□ -0.76
SMIM11A-203ENST00000399299 PRO0255Q9UI72 69 aa10.3□□□□□ -0.76
SMIM11A-203ENST00000399299 MRPS16Q9Y3D3 137 aaKnown RBP10.3□□□□□ -0.76
SMIM11A-203ENST00000399299 PKHD1P08F94 4074 aa10.3□□□□□ -0.76
SMIM11A-203ENST00000399299 GGTLC3B5MD39 225 aa10.29□□□□□ -0.76
SMIM11A-203ENST00000399299 RASL10AQ92737 203 aa10.29□□□□□ -0.76
SMIM11A-203ENST00000399299 Q9H8V8 135 aa10.29□□□□□ -0.76
SMIM11A-203ENST00000399299 CTXND1A0A1B0GTU2 59 aa10.28□□□□□ -0.76
SMIM11A-203ENST00000399299 A0A1W2PRE2 83 aa10.28□□□□□ -0.76
SMIM11A-203ENST00000399299 FBLL1A6NHQ2 334 aaKnown RBP10.28□□□□□ -0.76
SMIM11A-203ENST00000399299 F6UZH7 168 aa10.28□□□□□ -0.76
SMIM11A-203ENST00000399299 PAX4O43316 350 aa10.28□□□□□ -0.76
SMIM11A-203ENST00000399299 SUMO1P63165 101 aaKnown RBP10.28□□□□□ -0.76
SMIM11A-203ENST00000399299 TTC32Q5I0X7 151 aa10.28□□□□□ -0.76
SMIM11A-203ENST00000399299 C6orf223Q8N319 242 aa10.28□□□□□ -0.76
SMIM11A-203ENST00000399299 KCNS1Q96KK3 526 aa10.28□□□□□ -0.76
SMIM11A-203ENST00000399299 NAGKQ9UJ70 344 aa10.28□□□□□ -0.76
SMIM11A-203ENST00000399299 ICOSQ9Y6W8 199 aa10.28□□□□□ -0.76
SMIM11A-203ENST00000399299 IGHV3-16A0A0C4DH30 117 aa10.27□□□□□ -0.77
SMIM11A-203ENST00000399299 ARPC5O15511 151 aa10.27□□□□□ -0.77
SMIM11A-203ENST00000399299 IGLV2-11P01706 119 aa10.27□□□□□ -0.77
SMIM11A-203ENST00000399299 IGHV3-53P01767 116 aa10.27□□□□□ -0.77
SMIM11A-203ENST00000399299 CRYBA4P53673 196 aa10.27□□□□□ -0.77
SMIM11A-203ENST00000399299 FHL2Q14192 279 aa10.27□□□□□ -0.77
SMIM11A-203ENST00000399299 ZNF726P1Q15940 193 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms