RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 TP53TG3Q9ULZ0 132 aa11.73□□□□□ -0.53
APTR-201ENST00000398043 EPPK1P58107 5090 aaKnown RBP11.72□□□□□ -0.53
APTR-201ENST00000398043 TRAV8-1A0A0A6YYK1 113 aa11.72□□□□□ -0.53
APTR-201ENST00000398043 CTXND1A0A1B0GTU2 59 aa11.72□□□□□ -0.53
APTR-201ENST00000398043 SNURFLB1AK76 121 aa11.72□□□□□ -0.53
APTR-201ENST00000398043 GGTLC3B5MD39 225 aa11.72□□□□□ -0.53
APTR-201ENST00000398043 P0DMU3 169 aa11.72□□□□□ -0.53
APTR-201ENST00000398043 FAM231AP0DMU4 169 aa11.72□□□□□ -0.53
APTR-201ENST00000398043 FAM231CP0DMU5 169 aa11.72□□□□□ -0.53
APTR-201ENST00000398043 ZNF680Q8NEM1 530 aa11.72□□□□□ -0.53
APTR-201ENST00000398043 TMEM167BQ9NRX6 74 aa11.72□□□□□ -0.53
APTR-201ENST00000398043 IGHV1OR15-1A0A075B7D0 117 aa11.71□□□□□ -0.53
APTR-201ENST00000398043 TCL1AP56279 114 aa11.71□□□□□ -0.53
APTR-201ENST00000398043 IBA57Q5T440 356 aaKnown RBP11.71□□□□□ -0.53
APTR-201ENST00000398043 Q6ZTI0 123 aa11.71□□□□□ -0.53
APTR-201ENST00000398043 POM121L12Q8N7R1 296 aa11.71□□□□□ -0.53
APTR-201ENST00000398043 C5orf17Q8NAS9 161 aa11.71□□□□□ -0.53
APTR-201ENST00000398043 C18orf15Q96N68 181 aa11.71□□□□□ -0.53
APTR-201ENST00000398043 ARPC5LQ9BPX5 153 aa11.71□□□□□ -0.53
APTR-201ENST00000398043 RPH3ALQ9UNE2 315 aa11.71□□□□□ -0.53
APTR-201ENST00000398043 KLF12Q9Y4X4 402 aa11.71□□□□□ -0.53
APTR-201ENST00000398043 GAGE12BA1L429 117 aa11.7□□□□□ -0.54
APTR-201ENST00000398043 F5H768 121 aa11.7□□□□□ -0.54
APTR-201ENST00000398043 RGS13O14921 159 aa11.7□□□□□ -0.54
APTR-201ENST00000398043 GAGE7O76087 117 aa11.7□□□□□ -0.54
APTR-201ENST00000398043 IGLV2-11P01706 119 aa11.7□□□□□ -0.54
APTR-201ENST00000398043 TCRAP04437 139 aa11.7□□□□□ -0.54
APTR-201ENST00000398043 GAGE12FP0CL80 117 aa11.7□□□□□ -0.54
APTR-201ENST00000398043 GAGE12GP0CL81 117 aa11.7□□□□□ -0.54
APTR-201ENST00000398043 GAGE12IP0CL82 117 aa11.7□□□□□ -0.54
APTR-201ENST00000398043 C15orf53Q8NAA6 179 aa11.7□□□□□ -0.54
APTR-201ENST00000398043 SERTM2A0A1B0GWG4 89 aa11.69□□□□□ -0.54
APTR-201ENST00000398043 A0A1W2PRE2 83 aa11.69□□□□□ -0.54
APTR-201ENST00000398043 SPINK4O60575 86 aa11.69□□□□□ -0.54
APTR-201ENST00000398043 HOXA5P20719 270 aa11.69□□□□□ -0.54
APTR-201ENST00000398043 SUMO1P63165 101 aaKnown RBP11.69□□□□□ -0.54
APTR-201ENST00000398043 AKR1C8PQ5T2L2 129 aa11.69□□□□□ -0.54
APTR-201ENST00000398043 Q6ZNX1 250 aa11.69□□□□□ -0.54
APTR-201ENST00000398043 TMPRSS5Q9H3S3 457 aa11.69□□□□□ -0.54
APTR-201ENST00000398043 A0A0D9SG52 128 aa11.68□□□□□ -0.54
APTR-201ENST00000398043 TDRG1Q3Y452 100 aa11.68□□□□□ -0.54
APTR-201ENST00000398043 EPDR1Q9UM22 224 aa11.68□□□□□ -0.54
APTR-201ENST00000398043 FRAS1Q86XX4 4008 aa11.68□□□□□ -0.54
APTR-201ENST00000398043 BCL2L11O43521 198 aa11.67□□□□□ -0.54
APTR-201ENST00000398043 SEC11BP0C7V7 166 aa11.67□□□□□ -0.54
APTR-201ENST00000398043 FGF8P55075 233 aaPredicted RBP11.67□□□□□ -0.54
APTR-201ENST00000398043 RNF212Q495C1 297 aa11.67□□□□□ -0.54
APTR-201ENST00000398043 MUC21Q5SSG8 566 aa11.67□□□□□ -0.54
APTR-201ENST00000398043 SGK494Q96LW2 274 aa11.67□□□□□ -0.54
APTR-201ENST00000398043 TREM1Q9NP99 234 aa11.67□□□□□ -0.54
APTR-201ENST00000398043 F6UZH7 168 aa11.66□□□□□ -0.54
APTR-201ENST00000398043 FHITP49789 147 aa11.66□□□□□ -0.54
APTR-201ENST00000398043 LGALS9BQ3B8N2 356 aa11.66□□□□□ -0.54
APTR-201ENST00000398043 MDFICQ9P1T7 246 aa11.66□□□□□ -0.54
APTR-201ENST00000398043 MAP1LC3B2A6NCE7 125 aa11.65□□□□□ -0.54
APTR-201ENST00000398043 FAM74A7A6NL05 159 aa11.65□□□□□ -0.54
APTR-201ENST00000398043 ZNF80P51504 273 aaPredicted RBP11.65□□□□□ -0.54
APTR-201ENST00000398043 TCTE3Q8IZS6 198 aa11.65□□□□□ -0.54
APTR-201ENST00000398043 CYB561D1Q8N8Q1 229 aa11.65□□□□□ -0.54
APTR-201ENST00000398043 TMEM75Q8N9X5 138 aa11.65□□□□□ -0.54
APTR-201ENST00000398043 C8orf49Q96NF6 230 aa11.65□□□□□ -0.54
APTR-201ENST00000398043 ATG101Q9BSB4 218 aa11.65□□□□□ -0.54
APTR-201ENST00000398043 MAP1LC3BQ9GZQ8 125 aa11.65□□□□□ -0.54
APTR-201ENST00000398043 PSG8Q9UQ74 426 aa11.65□□□□□ -0.54
APTR-201ENST00000398043 TRGV1A0A0A0MS02 117 aa11.64□□□□□ -0.55
APTR-201ENST00000398043 H3BNG1 76 aa11.64□□□□□ -0.55
APTR-201ENST00000398043 FLI1Q01543 452 aaPredicted RBP11.64□□□□□ -0.55
APTR-201ENST00000398043 ZNF415Q09FC8 603 aa11.64□□□□□ -0.55
APTR-201ENST00000398043 TMUB2Q71RG4 321 aa11.64□□□□□ -0.55
APTR-201ENST00000398043 IQCF2Q8IXL9 164 aa11.64□□□□□ -0.55
APTR-201ENST00000398043 DNAH10Q8IVF4 4471 aa11.63□□□□□ -0.55
APTR-201ENST00000398043 TRAV26-1A0A087WT03 109 aa11.63□□□□□ -0.55
APTR-201ENST00000398043 TRAV21A0A0B4J279 112 aa11.63□□□□□ -0.55
APTR-201ENST00000398043 KANTRA0A1W2PQU2 76 aa11.63□□□□□ -0.55
APTR-201ENST00000398043 K7EQM0 130 aa11.63□□□□□ -0.55
APTR-201ENST00000398043 UBE2G2P60604 165 aa11.63□□□□□ -0.55
APTR-201ENST00000398043 OR5I1Q13606 314 aa11.63□□□□□ -0.55
APTR-201ENST00000398043 TMEM183BQ1AE95 376 aa11.63□□□□□ -0.55
APTR-201ENST00000398043 FAM159AQ6UWV7 190 aa11.63□□□□□ -0.55
APTR-201ENST00000398043 TMEM183AQ8IXX5 376 aa11.63□□□□□ -0.55
APTR-201ENST00000398043 MBD3L1Q8WWY6 194 aa11.63□□□□□ -0.55
APTR-201ENST00000398043 VSIG2Q96IQ7 327 aa11.63□□□□□ -0.55
APTR-201ENST00000398043 LINC00479Q96M42 142 aa11.63□□□□□ -0.55
APTR-201ENST00000398043 ZNF471Q9BX82 626 aaPredicted RBP11.63□□□□□ -0.55
APTR-201ENST00000398043 MRPL16Q9NX20 251 aaKnown RBP11.63□□□□□ -0.55
APTR-201ENST00000398043 C11orf21Q9P2W6 132 aa11.63□□□□□ -0.55
APTR-201ENST00000398043 TRGV11A0A075B6L2 103 aa11.62□□□□□ -0.55
APTR-201ENST00000398043 TRGV2A0A075B6R0 118 aa11.62□□□□□ -0.55
APTR-201ENST00000398043 IGHV3-16A0A0C4DH30 117 aa11.62□□□□□ -0.55
APTR-201ENST00000398043 FBLL1A6NHQ2 334 aaKnown RBP11.62□□□□□ -0.55
APTR-201ENST00000398043 UMAD1C9J7I0 102 aa11.62□□□□□ -0.55
APTR-201ENST00000398043 GNRH2O43555 120 aa11.62□□□□□ -0.55
APTR-201ENST00000398043 NUDT3O95989 172 aa11.62□□□□□ -0.55
APTR-201ENST00000398043 LGALSLQ3ZCW2 172 aaPredicted RBP11.62□□□□□ -0.55
APTR-201ENST00000398043 Q6ZR54 194 aa11.62□□□□□ -0.55
APTR-201ENST00000398043 STOML3Q8TAV4 291 aa11.62□□□□□ -0.55
APTR-201ENST00000398043 RASL10AQ92737 203 aa11.62□□□□□ -0.55
APTR-201ENST00000398043 NKX6-2Q9C056 277 aaPredicted RBP11.62□□□□□ -0.55
APTR-201ENST00000398043 BIRC6Q9NR09 4857 aa11.61□□□□□ -0.55
APTR-201ENST00000398043 TRAV34A0A0B4J273 112 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms