RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 TMEM263Q8WUH6 116 aaKnown RBP15.15■□□□□ 0.02
TSPAN4-206ENST00000397408 ATG101Q9BSB4 218 aa15.15■□□□□ 0.02
TSPAN4-206ENST00000397408 SULT1A2P50226 295 aa15.14■□□□□ 0.01
TSPAN4-206ENST00000397408 CCDC28AQ8IWP9 274 aa15.14■□□□□ 0.01
TSPAN4-206ENST00000397408 NKX6-2Q9C056 277 aaPredicted RBP15.14■□□□□ 0.01
TSPAN4-206ENST00000397408 Q6ZQT7 251 aa15.13■□□□□ 0.01
TSPAN4-206ENST00000397408 ZNF493Q6ZR52 646 aa15.13■□□□□ 0.01
TSPAN4-206ENST00000397408 PEX7O00628 323 aa15.12■□□□□ 0.01
TSPAN4-206ENST00000397408 CST9LP1Q5W188 147 aa15.12■□□□□ 0.01
TSPAN4-206ENST00000397408 TMEM75Q8N9X5 138 aa15.12■□□□□ 0.01
TSPAN4-206ENST00000397408 TVP23CQ96ET8 276 aa15.12■□□□□ 0.01
TSPAN4-206ENST00000397408 NDFIP1Q9BT67 221 aa15.12■□□□□ 0.01
TSPAN4-206ENST00000397408 TREM1Q9NP99 234 aa15.12■□□□□ 0.01
TSPAN4-206ENST00000397408 PSG8Q9UQ74 426 aa15.12■□□□□ 0.01
TSPAN4-206ENST00000397408 KLK5Q9Y337 293 aaPredicted RBP15.12■□□□□ 0.01
TSPAN4-206ENST00000397408 ARL2-SNX15V9GYD0 113 aa15.12■□□□□ 0.01
TSPAN4-206ENST00000397408 C11orf94C9JXX5 98 aa15.11■□□□□ 0.01
TSPAN4-206ENST00000397408 F6UZH7 168 aa15.11■□□□□ 0.01
TSPAN4-206ENST00000397408 RGS13O14921 159 aa15.11■□□□□ 0.01
TSPAN4-206ENST00000397408 PAGE4O60829 102 aa15.11■□□□□ 0.01
TSPAN4-206ENST00000397408 KMT2CQ8NEZ4 4911 aaKnown RBP15.11■□□□□ 0.01
TSPAN4-206ENST00000397408 TRAV10A0A0B4J240 114 aa15.1■□□□□ 0.01
TSPAN4-206ENST00000397408 CBY3A6NI87 242 aa15.1■□□□□ 0.01
TSPAN4-206ENST00000397408 LYRM9A8MSI8 78 aa15.1■□□□□ 0.01
TSPAN4-206ENST00000397408 IGLV2-11P01706 119 aa15.1■□□□□ 0.01
TSPAN4-206ENST00000397408 ATP5G3P48201 142 aa15.1■□□□□ 0.01
TSPAN4-206ENST00000397408 FLI1Q01543 452 aaPredicted RBP15.1■□□□□ 0.01
TSPAN4-206ENST00000397408 LINC00467Q9BRT7 94 aa15.1■□□□□ 0.01
TSPAN4-206ENST00000397408 DAD1P61803 113 aa15.09■□□□□ 0.01
TSPAN4-206ENST00000397408 Q6AWC8 147 aa15.09■□□□□ 0.01
TSPAN4-206ENST00000397408 PRNTQ86SH4 94 aa15.09■□□□□ 0.01
TSPAN4-206ENST00000397408 EIF4E3Q8N5X7 224 aaKnown RBP15.09■□□□□ 0.01
TSPAN4-206ENST00000397408 HIST1H2BAQ96A08 127 aa15.09■□□□□ 0.01
TSPAN4-206ENST00000397408 LINC00479Q96M42 142 aa15.09■□□□□ 0.01
TSPAN4-206ENST00000397408 BOLA1Q9Y3E2 137 aa15.09■□□□□ 0.01
TSPAN4-206ENST00000397408 TIMM8BQ9Y5J9 83 aaPredicted RBP15.09■□□□□ 0.01
TSPAN4-206ENST00000397408 IGHV1OR15-1A0A075B7D0 117 aa15.09■□□□□ 0.01
TSPAN4-206ENST00000397408 TRAV1-1A0A0B4J248 108 aa15.09■□□□□ 0.01
TSPAN4-206ENST00000397408 TRAV34A0A0B4J273 112 aa15.09■□□□□ 0.01
TSPAN4-206ENST00000397408 FBLL1A6NHQ2 334 aaKnown RBP15.09■□□□□ 0.01
TSPAN4-206ENST00000397408 PPT1P50897 306 aa15.09■□□□□ 0.01
TSPAN4-206ENST00000397408 NOP10Q9NPE3 64 aaKnown RBP15.09■□□□□ 0.01
TSPAN4-206ENST00000397408 DEFB131BA0A096LNP1 70 aa15.08■□□□□ 0
TSPAN4-206ENST00000397408 ANXA2RQ3ZCQ2 193 aa15.08■□□□□ 0
TSPAN4-206ENST00000397408 MUC21Q5SSG8 566 aa15.08■□□□□ 0
TSPAN4-206ENST00000397408 ALKAL2Q6UX46 152 aa15.08■□□□□ 0
TSPAN4-206ENST00000397408 ZNF680Q8NEM1 530 aa15.08■□□□□ 0
TSPAN4-206ENST00000397408 C2CD4CQ8TF44 421 aa15.08■□□□□ 0
TSPAN4-206ENST00000397408 C8orf49Q96NF6 230 aa15.08■□□□□ 0
TSPAN4-206ENST00000397408 TCEAL7Q9BRU2 100 aa15.08■□□□□ 0
TSPAN4-206ENST00000397408 DYNC2H1Q8NCM8 4307 aaKnown RBP15.07■□□□□ 0
TSPAN4-206ENST00000397408 SNURFLB1AK76 121 aa15.07■□□□□ 0
TSPAN4-206ENST00000397408 TEX46H3BTG2 121 aa15.07■□□□□ 0
TSPAN4-206ENST00000397408 DEFB130BP0DP73 79 aa15.07■□□□□ 0
TSPAN4-206ENST00000397408 DEFB130AP0DP74 79 aa15.07■□□□□ 0
TSPAN4-206ENST00000397408 CCL20P78556 96 aa15.07■□□□□ 0
TSPAN4-206ENST00000397408 GNG13Q9P2W3 67 aa15.07■□□□□ 0
TSPAN4-206ENST00000397408 TP53TG3Q9ULZ0 132 aa15.07■□□□□ 0
TSPAN4-206ENST00000397408 TRAV21A0A0B4J279 112 aa15.06■□□□□ 0
TSPAN4-206ENST00000397408 Q86TA4 180 aa15.06■□□□□ 0
TSPAN4-206ENST00000397408 C11orf72Q8NBR9 251 aa15.06■□□□□ 0
TSPAN4-206ENST00000397408 NAGKQ9UJ70 344 aa15.06■□□□□ 0
TSPAN4-206ENST00000397408 HTN3P15516 51 aa15.05■□□□□ -0
TSPAN4-206ENST00000397408 MANBALQ9NQG1 85 aa15.05■□□□□ -0
TSPAN4-206ENST00000397408 GSN-AS1Q9NRJ2 163 aa15.05■□□□□ -0
TSPAN4-206ENST00000397408 PLECQ15149 4684 aaKnown RBP15.05■□□□□ -0
TSPAN4-206ENST00000397408 IGLL5B9A064 214 aa15.04■□□□□ -0
TSPAN4-206ENST00000397408 AKR1C3P42330 323 aa15.04■□□□□ -0
TSPAN4-206ENST00000397408 SAPCD1Q5SSQ6 148 aa15.04■□□□□ -0
TSPAN4-206ENST00000397408 FAM159AQ6UWV7 190 aa15.04■□□□□ -0
TSPAN4-206ENST00000397408 GCGP01275 180 aa15.03■□□□□ -0
TSPAN4-206ENST00000397408 ZNF80P51504 273 aaPredicted RBP15.03■□□□□ -0
TSPAN4-206ENST00000397408 UBE2G1P62253 170 aa15.03■□□□□ -0
TSPAN4-206ENST00000397408 SMUG1Q53HV7 270 aa15.03■□□□□ -0
TSPAN4-206ENST00000397408 IBA57Q5T440 356 aaKnown RBP15.03■□□□□ -0
TSPAN4-206ENST00000397408 FMC1Q96HJ9 113 aa15.03■□□□□ -0
TSPAN4-206ENST00000397408 SCO2A0A1W2PP80 73 aa15.02■□□□□ -0
TSPAN4-206ENST00000397408 TCL1AP56279 114 aa15.02■□□□□ -0
TSPAN4-206ENST00000397408 DAZ2Q13117 558 aaKnown RBP15.02■□□□□ -0
TSPAN4-206ENST00000397408 LCE6AA0A183 80 aa15.01□□□□□ -0.01
TSPAN4-206ENST00000397408 ZNF415Q09FC8 603 aa15.01□□□□□ -0.01
TSPAN4-206ENST00000397408 TMEM183BQ1AE95 376 aa15.01□□□□□ -0.01
TSPAN4-206ENST00000397408 TMEM183AQ8IXX5 376 aa15.01□□□□□ -0.01
TSPAN4-206ENST00000397408 KLF12Q9Y4X4 402 aa15.01□□□□□ -0.01
TSPAN4-206ENST00000397408 TRGV11A0A075B6L2 103 aa15□□□□□ -0.01
TSPAN4-206ENST00000397408 GAGE12BA1L429 117 aa15□□□□□ -0.01
TSPAN4-206ENST00000397408 GAGE7O76087 117 aa15□□□□□ -0.01
TSPAN4-206ENST00000397408 GAGE12FP0CL80 117 aa15□□□□□ -0.01
TSPAN4-206ENST00000397408 GAGE12GP0CL81 117 aa15□□□□□ -0.01
TSPAN4-206ENST00000397408 GAGE12IP0CL82 117 aa15□□□□□ -0.01
TSPAN4-206ENST00000397408 TDRG1Q3Y452 100 aa15□□□□□ -0.01
TSPAN4-206ENST00000397408 LINC00612Q8N6U2 182 aa15□□□□□ -0.01
TSPAN4-206ENST00000397408 IGHV4-4A0A075B6R2 117 aa15□□□□□ -0.01
TSPAN4-206ENST00000397408 IFNA1P01562 189 aa15□□□□□ -0.01
TSPAN4-206ENST00000397408 PFN1P07737 140 aaKnown RBP15□□□□□ -0.01
TSPAN4-206ENST00000397408 Q6ZTI0 123 aa15□□□□□ -0.01
TSPAN4-206ENST00000397408 LYSTQ99698 3801 aa14.99□□□□□ -0.01
TSPAN4-206ENST00000397408 TRBV6-1A0A0K0K1D8 114 aa14.99□□□□□ -0.01
TSPAN4-206ENST00000397408 SDF2L1Q9HCN8 221 aa14.99□□□□□ -0.01
TSPAN4-206ENST00000397408 MDFICQ9P1T7 246 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms