RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 FAM110AQ9BQ89 295 aa9.85□□□□□ -0.83
SMU1-201ENST00000397149 ADAMTSL1Q8N6G6 1762 aa9.85□□□□□ -0.83
SMU1-201ENST00000397149 ARAP2Q8WZ64 1704 aa9.85□□□□□ -0.83
SMU1-201ENST00000397149 LMO1P25800 156 aa9.85□□□□□ -0.83
SMU1-201ENST00000397149 TMEM75Q8N9X5 138 aa9.85□□□□□ -0.83
SMU1-201ENST00000397149 SCN5AQ14524 2016 aa9.85□□□□□ -0.83
SMU1-201ENST00000397149 DOCK8Q8NF50 2099 aa9.85□□□□□ -0.83
SMU1-201ENST00000397149 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.85□□□□□ -0.83
SMU1-201ENST00000397149 ABCA3Q99758 1704 aa9.85□□□□□ -0.83
SMU1-201ENST00000397149 IGLV3-9A0A075B6K5 115 aa9.85□□□□□ -0.83
SMU1-201ENST00000397149 IGHV1-69DA0A0B4J2H0 117 aa9.85□□□□□ -0.83
SMU1-201ENST00000397149 IGHV1-69P01742 117 aa9.85□□□□□ -0.83
SMU1-201ENST00000397149 RNF5Q99942 180 aa9.85□□□□□ -0.83
SMU1-201ENST00000397149 K7EP34 96 aa9.84□□□□□ -0.83
SMU1-201ENST00000397149 ZFP36L1Q07352 338 aaKnown RBP9.84□□□□□ -0.83
SMU1-201ENST00000397149 PRR30Q53SZ7 412 aaPredicted RBP9.84□□□□□ -0.83
SMU1-201ENST00000397149 DKK2Q9UBU2 259 aa9.84□□□□□ -0.83
SMU1-201ENST00000397149 MRPS18CQ9Y3D5 142 aaKnown RBP9.84□□□□□ -0.83
SMU1-201ENST00000397149 NPSP0C0P6 89 aa9.84□□□□□ -0.83
SMU1-201ENST00000397149 PRR4Q16378 134 aa9.84□□□□□ -0.83
SMU1-201ENST00000397149 FAM236AA0A1B0GUQ0 79 aa9.83□□□□□ -0.84
SMU1-201ENST00000397149 FAM236BA0A1B0GV22 79 aa9.83□□□□□ -0.84
SMU1-201ENST00000397149 E7EQL1 145 aa9.83□□□□□ -0.84
SMU1-201ENST00000397149 ZNF134P52741 427 aa9.83□□□□□ -0.84
SMU1-201ENST00000397149 PAPPAQ13219 1627 aa9.83□□□□□ -0.84
SMU1-201ENST00000397149 COX7A2LO14548 114 aa9.83□□□□□ -0.84
SMU1-201ENST00000397149 LTAP01374 205 aa9.83□□□□□ -0.84
SMU1-201ENST00000397149 GFI1Q99684 422 aa9.83□□□□□ -0.84
SMU1-201ENST00000397149 ICOSQ9Y6W8 199 aa9.83□□□□□ -0.84
SMU1-201ENST00000397149 C15orf62A8K5M9 175 aa9.83□□□□□ -0.84
SMU1-201ENST00000397149 LYPD3O95274 346 aa9.83□□□□□ -0.84
SMU1-201ENST00000397149 CYYR1Q96J86 154 aa9.83□□□□□ -0.84
SMU1-201ENST00000397149 MRPL53Q96EL3 112 aaKnown RBP9.83□□□□□ -0.84
SMU1-201ENST00000397149 PKIGQ9Y2B9 76 aa9.83□□□□□ -0.84
SMU1-201ENST00000397149 CCL25O15444 150 aa9.82□□□□□ -0.84
SMU1-201ENST00000397149 ZNF883P0CG24 379 aa9.82□□□□□ -0.84
SMU1-201ENST00000397149 SND1-IT1Q9HBX3 110 aa9.82□□□□□ -0.84
SMU1-201ENST00000397149 SIGLEC8Q9NYZ4 499 aa9.82□□□□□ -0.84
SMU1-201ENST00000397149 FOCADQ5VW36 1801 aa9.82□□□□□ -0.84
SMU1-201ENST00000397149 IGKV1D-17A0A075B6S4 117 aa9.82□□□□□ -0.84
SMU1-201ENST00000397149 USP17L23D6RBM5 183 aa9.82□□□□□ -0.84
SMU1-201ENST00000397149 ZNF581Q9P0T4 197 aa9.82□□□□□ -0.84
SMU1-201ENST00000397149 PRSS47A8MTI9 375 aa9.82□□□□□ -0.84
SMU1-201ENST00000397149 NPYP01303 97 aa9.82□□□□□ -0.84
SMU1-201ENST00000397149 C18orf32Q8TCD1 76 aa9.82□□□□□ -0.84
SMU1-201ENST00000397149 OPRPNQ99935 248 aaPredicted RBP9.82□□□□□ -0.84
SMU1-201ENST00000397149 ZGRF1Q86YA3 2104 aa9.82□□□□□ -0.84
SMU1-201ENST00000397149 RREB1Q92766 1687 aa9.82□□□□□ -0.84
SMU1-201ENST00000397149 IGHV4-30-4P0DP06 118 aa9.82□□□□□ -0.84
SMU1-201ENST00000397149 IGHV4-31P0DP07 118 aa9.82□□□□□ -0.84
SMU1-201ENST00000397149 C12orf74Q32Q52 190 aa9.82□□□□□ -0.84
SMU1-201ENST00000397149 ANKRD36A6QL64 1941 aa9.82□□□□□ -0.84
SMU1-201ENST00000397149 CCL24O00175 119 aa9.82□□□□□ -0.84
SMU1-201ENST00000397149 GLI3P10071 1580 aa9.81□□□□□ -0.84
SMU1-201ENST00000397149 CFC1BP0CG36 223 aa9.81□□□□□ -0.84
SMU1-201ENST00000397149 CFC1P0CG37 223 aa9.81□□□□□ -0.84
SMU1-201ENST00000397149 HERV-K104P63124 156 aa9.81□□□□□ -0.84
SMU1-201ENST00000397149 TMEM61Q8N0U2 210 aa9.81□□□□□ -0.84
SMU1-201ENST00000397149 RETNQ9HD89 108 aa9.81□□□□□ -0.84
SMU1-201ENST00000397149 FAM120AOSQ5T036 256 aa9.81□□□□□ -0.84
SMU1-201ENST00000397149 GFRA4Q9GZZ7 299 aa9.81□□□□□ -0.84
SMU1-201ENST00000397149 IGKV1-6A0A0C4DH72 117 aa9.81□□□□□ -0.84
SMU1-201ENST00000397149 PRR20EP86478 221 aa9.81□□□□□ -0.84
SMU1-201ENST00000397149 PRR20CP86479 221 aa9.81□□□□□ -0.84
SMU1-201ENST00000397149 PRR20DP86480 221 aa9.81□□□□□ -0.84
SMU1-201ENST00000397149 PRR20BP86481 221 aa9.81□□□□□ -0.84
SMU1-201ENST00000397149 PRR20AP86496 221 aa9.81□□□□□ -0.84
SMU1-201ENST00000397149 DEFB125Q8N687 156 aa9.81□□□□□ -0.84
SMU1-201ENST00000397149 SH2D6Q7Z4S9 175 aa9.81□□□□□ -0.84
SMU1-201ENST00000397149 PKDREJQ9NTG1 2253 aa9.81□□□□□ -0.84
SMU1-201ENST00000397149 IGKV2D-26A0A0A0MRZ7 120 aa9.81□□□□□ -0.84
SMU1-201ENST00000397149 GGNQ86UU5 652 aa9.81□□□□□ -0.84
SMU1-201ENST00000397149 F8VRH5 84 aa9.8□□□□□ -0.84
SMU1-201ENST00000397149 J3QKU1 62 aa9.8□□□□□ -0.84
SMU1-201ENST00000397149 BTCP35070 178 aa9.8□□□□□ -0.84
SMU1-201ENST00000397149 SMIM27A0A1W2PRY6 76 aa9.8□□□□□ -0.84
SMU1-201ENST00000397149 FGF16O43320 207 aa9.8□□□□□ -0.84
SMU1-201ENST00000397149 COL18A1P39060 1754 aa9.8□□□□□ -0.84
SMU1-201ENST00000397149 CSRP1P21291 193 aaKnown RBP9.8□□□□□ -0.84
SMU1-201ENST00000397149 PDE6HQ13956 83 aa9.8□□□□□ -0.84
SMU1-201ENST00000397149 HIGD2AQ9BW72 106 aa9.8□□□□□ -0.84
SMU1-201ENST00000397149 B9D2Q9BPU9 175 aa9.8□□□□□ -0.84
SMU1-201ENST00000397149 HEATR5AQ86XA9 2040 aa9.79□□□□□ -0.84
SMU1-201ENST00000397149 SIPA1L3O60292 1781 aaPredicted RBP9.79□□□□□ -0.84
SMU1-201ENST00000397149 RBAKDNA6NC62 111 aa9.79□□□□□ -0.84
SMU1-201ENST00000397149 TRBV12-3P01733 135 aa9.79□□□□□ -0.84
SMU1-201ENST00000397149 TMEM14EPQ6UXP3 125 aa9.79□□□□□ -0.84
SMU1-201ENST00000397149 TRBV19A0A075B6N1 114 aa9.79□□□□□ -0.84
SMU1-201ENST00000397149 A0A0B4J2C4 111 aa9.79□□□□□ -0.84
SMU1-201ENST00000397149 C5orf63A6NC05 138 aa9.79□□□□□ -0.84
SMU1-201ENST00000397149 ATP6V0E2Q8NHE4 81 aa9.79□□□□□ -0.84
SMU1-201ENST00000397149 A0A0G2JRQ6 117 aa9.79□□□□□ -0.84
SMU1-201ENST00000397149 ELANEP08246 267 aa9.79□□□□□ -0.84
SMU1-201ENST00000397149 GP9P14770 177 aa9.79□□□□□ -0.84
SMU1-201ENST00000397149 ZNF493Q6ZR52 646 aa9.79□□□□□ -0.84
SMU1-201ENST00000397149 WISP3O95389 354 aaPredicted RBP9.78□□□□□ -0.84
SMU1-201ENST00000397149 COX8AP10176 69 aa9.78□□□□□ -0.84
SMU1-201ENST00000397149 SPANXDQ9BXN6 97 aa9.78□□□□□ -0.84
SMU1-201ENST00000397149 TNCP24821 2201 aa9.78□□□□□ -0.84
SMU1-201ENST00000397149 SPART-AS1P0CW21 52 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms