RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 CTDSP1Q9GZU7 261 aa13.56□□□□□ -0.24
SNCB-202ENST00000393693 BIN3Q9NQY0 253 aa13.56□□□□□ -0.24
SNCB-202ENST00000393693 PCLOQ9Y6V0 5065 aa13.56□□□□□ -0.24
SNCB-202ENST00000393693 SCO1O75880 301 aa13.55□□□□□ -0.24
SNCB-202ENST00000393693 CMC4P56277 68 aaPredicted RBP13.55□□□□□ -0.24
SNCB-202ENST00000393693 PAFAH1B2P68402 229 aa13.55□□□□□ -0.24
SNCB-202ENST00000393693 OCC1Q8TAD7 63 aa13.55□□□□□ -0.24
SNCB-202ENST00000393693 C11orf68Q9H3H3 251 aaKnown RBP13.55□□□□□ -0.24
SNCB-202ENST00000393693 TRBV20OR9-2A0A075B6H5 130 aa13.54□□□□□ -0.24
SNCB-202ENST00000393693 TRAV34A0A0B4J273 112 aa13.54□□□□□ -0.24
SNCB-202ENST00000393693 M0R3E3 92 aa13.54□□□□□ -0.24
SNCB-202ENST00000393693 ISLRO14498 428 aa13.54□□□□□ -0.24
SNCB-202ENST00000393693 PPP1R2P9O14990 202 aa13.54□□□□□ -0.24
SNCB-202ENST00000393693 CA1P00915 261 aaPredicted RBP13.54□□□□□ -0.24
SNCB-202ENST00000393693 PSG3Q16557 428 aa13.54□□□□□ -0.24
SNCB-202ENST00000393693 ANAPC16Q96DE5 110 aa13.54□□□□□ -0.24
SNCB-202ENST00000393693 IGF2BP2-AS1Q96M15 143 aa13.54□□□□□ -0.24
SNCB-202ENST00000393693 LINC00479Q96M42 142 aa13.54□□□□□ -0.24
SNCB-202ENST00000393693 SMCO4Q9NRQ5 59 aa13.54□□□□□ -0.24
SNCB-202ENST00000393693 DNAH6Q9C0G6 4158 aa13.53□□□□□ -0.24
SNCB-202ENST00000393693 DNASE2O00115 360 aaPredicted RBP13.53□□□□□ -0.24
SNCB-202ENST00000393693 FLI1Q01543 452 aaPredicted RBP13.53□□□□□ -0.24
SNCB-202ENST00000393693 BTN1A1Q13410 526 aa13.53□□□□□ -0.24
SNCB-202ENST00000393693 ISOC2Q96AB3 205 aa13.53□□□□□ -0.24
SNCB-202ENST00000393693 ZFP30Q9Y2G7 519 aa13.53□□□□□ -0.24
SNCB-202ENST00000393693 TRAV8-2A0A0B4J237 113 aa13.52□□□□□ -0.25
SNCB-202ENST00000393693 RBAKDNA6NC62 111 aa13.52□□□□□ -0.25
SNCB-202ENST00000393693 MGST1P10620 155 aaKnown RBP13.52□□□□□ -0.25
SNCB-202ENST00000393693 DEFB131AP59861 70 aa13.52□□□□□ -0.25
SNCB-202ENST00000393693 FAM24BQ8N5W8 94 aa13.52□□□□□ -0.25
SNCB-202ENST00000393693 TMEM242Q9NWH2 141 aa13.52□□□□□ -0.25
SNCB-202ENST00000393693 PSG8Q9UQ74 426 aa13.52□□□□□ -0.25
SNCB-202ENST00000393693 PGPEP1LA6NFU8 196 aa13.51□□□□□ -0.25
SNCB-202ENST00000393693 SOCS3O14543 225 aa13.51□□□□□ -0.25
SNCB-202ENST00000393693 LTAP01374 205 aa13.51□□□□□ -0.25
SNCB-202ENST00000393693 HLA-DMBP28068 263 aa13.51□□□□□ -0.25
SNCB-202ENST00000393693 RNF212Q495C1 297 aa13.51□□□□□ -0.25
SNCB-202ENST00000393693 IGFL4Q6B9Z1 124 aa13.51□□□□□ -0.25
SNCB-202ENST00000393693 PRNTQ86SH4 94 aa13.51□□□□□ -0.25
SNCB-202ENST00000393693 Q86TA4 180 aa13.51□□□□□ -0.25
SNCB-202ENST00000393693 RNF182Q8N6D2 247 aa13.51□□□□□ -0.25
SNCB-202ENST00000393693 C15orf54Q8N8G6 183 aa13.51□□□□□ -0.25
SNCB-202ENST00000393693 ZNF738Q8NE65 137 aa13.51□□□□□ -0.25
SNCB-202ENST00000393693 MS4A6AQ9H2W1 248 aa13.51□□□□□ -0.25
SNCB-202ENST00000393693 APLNQ9ULZ1 77 aa13.51□□□□□ -0.25
SNCB-202ENST00000393693 IGLL5B9A064 214 aa13.5□□□□□ -0.25
SNCB-202ENST00000393693 H7BYZ3 331 aa13.5□□□□□ -0.25
SNCB-202ENST00000393693 GCGP01275 180 aa13.5□□□□□ -0.25
SNCB-202ENST00000393693 SAPCD1Q5SSQ6 148 aa13.5□□□□□ -0.25
SNCB-202ENST00000393693 SFRP2Q96HF1 295 aa13.5□□□□□ -0.25
SNCB-202ENST00000393693 NDFIP1Q9BT67 221 aa13.5□□□□□ -0.25
SNCB-202ENST00000393693 TRAV2A0A0B4J234 112 aa13.49□□□□□ -0.25
SNCB-202ENST00000393693 ZNF705FA8MVS1 300 aaPredicted RBP13.49□□□□□ -0.25
SNCB-202ENST00000393693 IGLV2-8P01709 118 aa13.49□□□□□ -0.25
SNCB-202ENST00000393693 SNRPD3P62318 126 aaKnown RBP13.49□□□□□ -0.25
SNCB-202ENST00000393693 TMEM183AQ8IXX5 376 aa13.49□□□□□ -0.25
SNCB-202ENST00000393693 OR10G8Q8NGN5 311 aa13.49□□□□□ -0.25
SNCB-202ENST00000393693 SGK494Q96LW2 274 aa13.49□□□□□ -0.25
SNCB-202ENST00000393693 IGKV2-40A0A087WW87 121 aaPredicted RBP13.48□□□□□ -0.25
SNCB-202ENST00000393693 TRAV8-1A0A0A6YYK1 113 aa13.48□□□□□ -0.25
SNCB-202ENST00000393693 IGKV2D-40P01614 121 aaPredicted RBP13.48□□□□□ -0.25
SNCB-202ENST00000393693 IGLV2-11P01706 119 aa13.48□□□□□ -0.25
SNCB-202ENST00000393693 ERVFC1-1P60608 527 aa13.48□□□□□ -0.25
SNCB-202ENST00000393693 TMEM78Q5T7P6 136 aa13.48□□□□□ -0.25
SNCB-202ENST00000393693 Q8NAQ8 132 aa13.48□□□□□ -0.25
SNCB-202ENST00000393693 OR10J6PQ8NGY7 276 aa13.48□□□□□ -0.25
SNCB-202ENST00000393693 DCANP1Q8TF63 244 aa13.48□□□□□ -0.25
SNCB-202ENST00000393693 OSTCQ9NRP0 149 aa13.48□□□□□ -0.25
SNCB-202ENST00000393693 K7EN84 100 aa13.47□□□□□ -0.25
SNCB-202ENST00000393693 K7EQG2 157 aa13.47□□□□□ -0.25
SNCB-202ENST00000393693 GIG44P09565 113 aaPredicted RBP13.47□□□□□ -0.25
SNCB-202ENST00000393693 RBMY1A1P0DJD3 496 aaKnown RBP13.47□□□□□ -0.25
SNCB-202ENST00000393693 RBMY1CP0DJD4 496 aa13.47□□□□□ -0.25
SNCB-202ENST00000393693 S100PP25815 95 aa13.47□□□□□ -0.25
SNCB-202ENST00000393693 TCTAP57738 103 aa13.47□□□□□ -0.25
SNCB-202ENST00000393693 RBMY1FQ15415 496 aaKnown RBP13.47□□□□□ -0.25
SNCB-202ENST00000393693 TMEM88Q6PEY1 159 aa13.47□□□□□ -0.25
SNCB-202ENST00000393693 CBLN2Q8IUK8 224 aa13.47□□□□□ -0.25
SNCB-202ENST00000393693 MLST8Q9BVC4 326 aa13.47□□□□□ -0.25
SNCB-202ENST00000393693 IGHV4-28A0A0C4DH34 117 aa13.46□□□□□ -0.25
SNCB-202ENST00000393693 CT45A10P0DMU9 189 aa13.46□□□□□ -0.25
SNCB-202ENST00000393693 IBA57Q5T440 356 aaKnown RBP13.46□□□□□ -0.25
SNCB-202ENST00000393693 FAM231DQ6ZW35 169 aa13.46□□□□□ -0.25
SNCB-202ENST00000393693 STHQ8IWL8 128 aa13.46□□□□□ -0.25
SNCB-202ENST00000393693 NHLRC2Q8NBF2 726 aa13.46□□□□□ -0.25
SNCB-202ENST00000393693 DAZAP1Q96EP5 407 aaKnown RBP13.46□□□□□ -0.25
SNCB-202ENST00000393693 ZNF492Q9P255 531 aa13.46□□□□□ -0.25
SNCB-202ENST00000393693 PRAC2D3DTV9 90 aa13.45□□□□□ -0.26
SNCB-202ENST00000393693 ZNF138P52744 262 aa13.45□□□□□ -0.26
SNCB-202ENST00000393693 OR5I1Q13606 314 aa13.45□□□□□ -0.26
SNCB-202ENST00000393693 KCNIP4Q6PIL6 250 aa13.45□□□□□ -0.26
SNCB-202ENST00000393693 C9orf47Q6ZRZ4 202 aa13.45□□□□□ -0.26
SNCB-202ENST00000393693 C20orf173Q96LM9 149 aa13.45□□□□□ -0.26
SNCB-202ENST00000393693 LINC00477Q96M19 166 aa13.45□□□□□ -0.26
SNCB-202ENST00000393693 VGLL1Q99990 258 aa13.45□□□□□ -0.26
SNCB-202ENST00000393693 KNCNA6PVL3 124 aa13.44□□□□□ -0.26
SNCB-202ENST00000393693 GATCO43716 136 aaKnown RBP13.44□□□□□ -0.26
SNCB-202ENST00000393693 PRR27Q6MZM9 219 aa13.44□□□□□ -0.26
SNCB-202ENST00000393693 IMMP2LQ96T52 175 aa13.44□□□□□ -0.26
SNCB-202ENST00000393693 PPP1R14DQ9NXH3 145 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms