RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 TRAPPC1Q9Y5R8 145 aa13.1□□□□□ -0.31
MBD4-202ENST00000393278 TRBV7-9A0A0J9YWB2 115 aa13.09□□□□□ -0.31
MBD4-202ENST00000393278 TMEM189A5PLL7 270 aa13.09□□□□□ -0.31
MBD4-202ENST00000393278 FOXA3P55318 350 aaPredicted RBP13.09□□□□□ -0.31
MBD4-202ENST00000393278 COX19Q49B96 90 aa13.09□□□□□ -0.31
MBD4-202ENST00000393278 HIST1H2BKO60814 126 aa13.08□□□□□ -0.31
MBD4-202ENST00000393278 HIST1H2BJP06899 126 aa13.08□□□□□ -0.31
MBD4-202ENST00000393278 TRGC1P0CF51 173 aa13.08□□□□□ -0.31
MBD4-202ENST00000393278 HIST1H2BOP23527 126 aa13.08□□□□□ -0.31
MBD4-202ENST00000393278 HIST1H2BBP33778 126 aa13.08□□□□□ -0.31
MBD4-202ENST00000393278 HIST1H2BDP58876 126 aa13.08□□□□□ -0.31
MBD4-202ENST00000393278 HIST1H2BCP62807 126 aa13.08□□□□□ -0.31
MBD4-202ENST00000393278 FABP9Q0Z7S8 132 aa13.08□□□□□ -0.31
MBD4-202ENST00000393278 HIST2H2BEQ16778 126 aa13.08□□□□□ -0.31
MBD4-202ENST00000393278 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.08□□□□□ -0.31
MBD4-202ENST00000393278 RASL11AQ6T310 242 aa13.08□□□□□ -0.31
MBD4-202ENST00000393278 ATP5L2Q7Z4Y8 100 aa13.08□□□□□ -0.31
MBD4-202ENST00000393278 ZFAND2AQ8N6M9 145 aa13.08□□□□□ -0.31
MBD4-202ENST00000393278 HIST1H2BHQ93079 126 aa13.08□□□□□ -0.31
MBD4-202ENST00000393278 PGLYRP4Q96LB8 373 aa13.08□□□□□ -0.31
MBD4-202ENST00000393278 HIST1H2BNQ99877 126 aa13.08□□□□□ -0.31
MBD4-202ENST00000393278 HIST1H2BMQ99879 126 aa13.08□□□□□ -0.31
MBD4-202ENST00000393278 GNB1LQ9BYB4 327 aa13.08□□□□□ -0.31
MBD4-202ENST00000393278 SAV1Q9H4B6 383 aaPredicted RBP13.08□□□□□ -0.31
MBD4-202ENST00000393278 XKRY2A2RUG3 117 aa13.08□□□□□ -0.32
MBD4-202ENST00000393278 RPS20P60866 119 aaKnown RBP13.08□□□□□ -0.32
MBD4-202ENST00000393278 WDR73Q6P4I2 378 aa13.08□□□□□ -0.32
MBD4-202ENST00000393278 SNURFLB1AK76 121 aa13.07□□□□□ -0.32
MBD4-202ENST00000393278 LINC01559Q495D7 138 aa13.07□□□□□ -0.32
MBD4-202ENST00000393278 CD300EQ496F6 205 aaPredicted RBP13.07□□□□□ -0.32
MBD4-202ENST00000393278 PRR9Q5T870 116 aa13.07□□□□□ -0.32
MBD4-202ENST00000393278 GDF5OSQ5U4N7 250 aa13.07□□□□□ -0.32
MBD4-202ENST00000393278 Q6AWC8 147 aa13.07□□□□□ -0.32
MBD4-202ENST00000393278 TMEM136Q6ZRR5 245 aa13.07□□□□□ -0.32
MBD4-202ENST00000393278 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.07□□□□□ -0.32
MBD4-202ENST00000393278 TEP1Q99973 2627 aaKnown RBP13.07□□□□□ -0.32
MBD4-202ENST00000393278 SETD2Q9BYW2 2564 aaPredicted RBP13.07□□□□□ -0.32
MBD4-202ENST00000393278 TRAV25A0A0B4J276 109 aa13.06□□□□□ -0.32
MBD4-202ENST00000393278 A0A0J9YX75 114 aa13.06□□□□□ -0.32
MBD4-202ENST00000393278 A0A1B0GXF2 115 aa13.06□□□□□ -0.32
MBD4-202ENST00000393278 MT-ND6P03923 174 aa13.06□□□□□ -0.32
MBD4-202ENST00000393278 S100A6P06703 90 aa13.06□□□□□ -0.32
MBD4-202ENST00000393278 CRISP2P16562 243 aa13.06□□□□□ -0.32
MBD4-202ENST00000393278 APRG1Q8IVJ8 170 aa13.06□□□□□ -0.32
MBD4-202ENST00000393278 C2CD3Q4AC94 2353 aa13.06□□□□□ -0.32
MBD4-202ENST00000393278 TMSB15BA0A087X1C1 80 aa13.05□□□□□ -0.32
MBD4-202ENST00000393278 SPAG8Q99932 426 aaPredicted RBP13.05□□□□□ -0.32
MBD4-202ENST00000393278 MRPL18Q9H0U6 180 aaKnown RBP13.05□□□□□ -0.32
MBD4-202ENST00000393278 ORM1P02763 201 aa13.05□□□□□ -0.32
MBD4-202ENST00000393278 CD33P20138 364 aa13.05□□□□□ -0.32
MBD4-202ENST00000393278 EBLN2Q6P2I7 272 aa13.05□□□□□ -0.32
MBD4-202ENST00000393278 FOXI2Q6ZQN5 318 aa13.05□□□□□ -0.32
MBD4-202ENST00000393278 ZNF575Q86XF7 245 aa13.05□□□□□ -0.32
MBD4-202ENST00000393278 ODF3Q96PU9 254 aa13.05□□□□□ -0.32
MBD4-202ENST00000393278 C5orf52A6NGY3 159 aa13.04□□□□□ -0.32
MBD4-202ENST00000393278 HLA-DQA1P01909 254 aa13.04□□□□□ -0.32
MBD4-202ENST00000393278 HBBP68871 147 aa13.04□□□□□ -0.32
MBD4-202ENST00000393278 C11orf21Q9P2W6 132 aa13.04□□□□□ -0.32
MBD4-202ENST00000393278 IGKV3D-20A0A0C4DH25 116 aa13.03□□□□□ -0.32
MBD4-202ENST00000393278 J3KRW8 73 aa13.03□□□□□ -0.32
MBD4-202ENST00000393278 DUSP14O95147 198 aaKnown RBP13.03□□□□□ -0.32
MBD4-202ENST00000393278 RAB4BP61018 213 aa13.03□□□□□ -0.32
MBD4-202ENST00000393278 SNRPEP62304 92 aaKnown RBP13.03□□□□□ -0.32
MBD4-202ENST00000393278 TRAV21A0A0B4J279 112 aa13.02□□□□□ -0.32
MBD4-202ENST00000393278 A0A1B0GUT8 65 aa13.02□□□□□ -0.32
MBD4-202ENST00000393278 OR4C46A6NHA9 309 aa13.02□□□□□ -0.32
MBD4-202ENST00000393278 KLLNB2CW77 178 aa13.02□□□□□ -0.32
MBD4-202ENST00000393278 GPX1P07203 203 aa13.02□□□□□ -0.32
MBD4-202ENST00000393278 DEFB131AP59861 70 aa13.02□□□□□ -0.32
MBD4-202ENST00000393278 Q6ZQT7 251 aa13.02□□□□□ -0.32
MBD4-202ENST00000393278 ZNF256Q9Y2P7 627 aaPredicted RBP13.02□□□□□ -0.32
MBD4-202ENST00000393278 ARMS2P0C7Q2 107 aa13.02□□□□□ -0.33
MBD4-202ENST00000393278 IGLC6P0CF74 106 aa13.02□□□□□ -0.33
MBD4-202ENST00000393278 CAMPP49913 170 aa13.02□□□□□ -0.33
MBD4-202ENST00000393278 NDUFA6P56556 154 aa13.02□□□□□ -0.33
MBD4-202ENST00000393278 CTRLP40313 264 aa13.01□□□□□ -0.33
MBD4-202ENST00000393278 LEPP41159 167 aa13.01□□□□□ -0.33
MBD4-202ENST00000393278 RIGQ13278 110 aa13.01□□□□□ -0.33
MBD4-202ENST00000393278 LYZL1Q6UWQ5 148 aa13.01□□□□□ -0.33
MBD4-202ENST00000393278 FER1L6-AS1Q8NA97 138 aa13.01□□□□□ -0.33
MBD4-202ENST00000393278 TPPP3Q9BW30 176 aa13.01□□□□□ -0.33
MBD4-202ENST00000393278 MAP6D1Q9H9H5 199 aa13.01□□□□□ -0.33
MBD4-202ENST00000393278 GRIFINA4D1Z8 144 aa13□□□□□ -0.33
MBD4-202ENST00000393278 SAP30O75446 220 aa13□□□□□ -0.33
MBD4-202ENST00000393278 RNASE4P34096 147 aaKnown RBP13□□□□□ -0.33
MBD4-202ENST00000393278 KIR3DS1Q14943 382 aa13□□□□□ -0.33
MBD4-202ENST00000393278 BORCS7Q96B45 105 aa13□□□□□ -0.33
MBD4-202ENST00000393278 PF4P02776 101 aa12.99□□□□□ -0.33
MBD4-202ENST00000393278 WNK1Q9H4A3 2382 aa12.99□□□□□ -0.33
MBD4-202ENST00000393278 A0A1B0GW15 77 aa12.99□□□□□ -0.33
MBD4-202ENST00000393278 KNCNA6PVL3 124 aa12.99□□□□□ -0.33
MBD4-202ENST00000393278 A8MTW9 85 aa12.99□□□□□ -0.33
MBD4-202ENST00000393278 UBE2CO00762 179 aa12.99□□□□□ -0.33
MBD4-202ENST00000393278 IGKV3-20P01619 116 aa12.99□□□□□ -0.33
MBD4-202ENST00000393278 APCSP02743 223 aa12.99□□□□□ -0.33
MBD4-202ENST00000393278 HLA-DRB4P13762 266 aa12.99□□□□□ -0.33
MBD4-202ENST00000393278 SLAQ13239 276 aa12.99□□□□□ -0.33
MBD4-202ENST00000393278 LINC00482Q8N8I6 264 aa12.99□□□□□ -0.33
MBD4-202ENST00000393278 CITED1Q99966 193 aa12.99□□□□□ -0.33
MBD4-202ENST00000393278 HLA-DRB4X5D2U9 266 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms