RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 C15orf53Q8NAA6 179 aa8.97□□□□□ -0.97
GGPS1-203ENST00000391855 C5orf17Q8NAS9 161 aa8.97□□□□□ -0.97
GGPS1-203ENST00000391855 HYLS1Q96M11 299 aa8.97□□□□□ -0.97
GGPS1-203ENST00000391855 ARPC5LQ9BPX5 153 aa8.97□□□□□ -0.97
GGPS1-203ENST00000391855 NOP10Q9NPE3 64 aaKnown RBP8.97□□□□□ -0.97
GGPS1-203ENST00000391855 RGS13O14921 159 aa8.97□□□□□ -0.97
GGPS1-203ENST00000391855 LORP23490 312 aaPredicted RBP8.97□□□□□ -0.97
GGPS1-203ENST00000391855 IBA57Q5T440 356 aaKnown RBP8.97□□□□□ -0.97
GGPS1-203ENST00000391855 KCNRGQ8N5I3 272 aa8.97□□□□□ -0.97
GGPS1-203ENST00000391855 Q8TAT8 98 aa8.97□□□□□ -0.97
GGPS1-203ENST00000391855 IGHV1OR15-1A0A075B7D0 117 aa8.96□□□□□ -0.98
GGPS1-203ENST00000391855 A0A0D9SG52 128 aa8.96□□□□□ -0.98
GGPS1-203ENST00000391855 K7EQM0 130 aa8.96□□□□□ -0.98
GGPS1-203ENST00000391855 TMEM88Q6PEY1 159 aa8.96□□□□□ -0.98
GGPS1-203ENST00000391855 GOLT1AQ6ZVE7 132 aa8.96□□□□□ -0.98
GGPS1-203ENST00000391855 NDFIP1Q9BT67 221 aa8.96□□□□□ -0.98
GGPS1-203ENST00000391855 CYTL1Q9NRR1 136 aa8.96□□□□□ -0.98
GGPS1-203ENST00000391855 RPH3ALQ9UNE2 315 aa8.96□□□□□ -0.98
GGPS1-203ENST00000391855 A0A1W2PRE2 83 aa8.95□□□□□ -0.98
GGPS1-203ENST00000391855 FBLL1A6NHQ2 334 aaKnown RBP8.95□□□□□ -0.98
GGPS1-203ENST00000391855 F5H768 121 aa8.95□□□□□ -0.98
GGPS1-203ENST00000391855 SMLR1H3BR10 107 aa8.95□□□□□ -0.98
GGPS1-203ENST00000391855 EIF5AP63241 154 aaKnown RBP8.95□□□□□ -0.98
GGPS1-203ENST00000391855 PRR9Q5T870 116 aa8.95□□□□□ -0.98
GGPS1-203ENST00000391855 Q6AWC8 147 aa8.95□□□□□ -0.98
GGPS1-203ENST00000391855 C11orf72Q8NBR9 251 aa8.95□□□□□ -0.98
GGPS1-203ENST00000391855 VPS13DQ5THJ4 4388 aa8.94□□□□□ -0.98
GGPS1-203ENST00000391855 KANTRA0A1W2PQU2 76 aa8.94□□□□□ -0.98
GGPS1-203ENST00000391855 TCRAP04437 139 aa8.94□□□□□ -0.98
GGPS1-203ENST00000391855 TCL1AP56279 114 aa8.94□□□□□ -0.98
GGPS1-203ENST00000391855 TNP2Q05952 138 aa8.94□□□□□ -0.98
GGPS1-203ENST00000391855 ZNF415Q09FC8 603 aa8.94□□□□□ -0.98
GGPS1-203ENST00000391855 IQCF2Q8IXL9 164 aa8.94□□□□□ -0.98
GGPS1-203ENST00000391855 POM121L12Q8N7R1 296 aa8.94□□□□□ -0.98
GGPS1-203ENST00000391855 C18orf15Q96N68 181 aa8.94□□□□□ -0.98
GGPS1-203ENST00000391855 NKX6-2Q9C056 277 aaPredicted RBP8.94□□□□□ -0.98
GGPS1-203ENST00000391855 BCL2L11O43521 198 aa8.93□□□□□ -0.98
GGPS1-203ENST00000391855 RNF212Q495C1 297 aa8.93□□□□□ -0.98
GGPS1-203ENST00000391855 SSX7Q7RTT5 188 aa8.93□□□□□ -0.98
GGPS1-203ENST00000391855 STOML3Q8TAV4 291 aa8.93□□□□□ -0.98
GGPS1-203ENST00000391855 GSN-AS1Q9NRJ2 163 aa8.93□□□□□ -0.98
GGPS1-203ENST00000391855 TRGV11A0A075B6L2 103 aa8.92□□□□□ -0.98
GGPS1-203ENST00000391855 TRAV21A0A0B4J279 112 aa8.92□□□□□ -0.98
GGPS1-203ENST00000391855 GAGE12BA1L429 117 aa8.92□□□□□ -0.98
GGPS1-203ENST00000391855 GGTLC3B5MD39 225 aa8.92□□□□□ -0.98
GGPS1-203ENST00000391855 UMAD1C9J7I0 102 aa8.92□□□□□ -0.98
GGPS1-203ENST00000391855 GAGE7O76087 117 aa8.92□□□□□ -0.98
GGPS1-203ENST00000391855 SEC11BP0C7V7 166 aa8.92□□□□□ -0.98
GGPS1-203ENST00000391855 GAGE12FP0CL80 117 aa8.92□□□□□ -0.98
GGPS1-203ENST00000391855 GAGE12GP0CL81 117 aa8.92□□□□□ -0.98
GGPS1-203ENST00000391855 GAGE12IP0CL82 117 aa8.92□□□□□ -0.98
GGPS1-203ENST00000391855 SUMO1P63165 101 aaKnown RBP8.92□□□□□ -0.98
GGPS1-203ENST00000391855 GNG5P63218 68 aa8.92□□□□□ -0.98
GGPS1-203ENST00000391855 ZNF726P1Q15940 193 aa8.92□□□□□ -0.98
GGPS1-203ENST00000391855 LGALS9BQ3B8N2 356 aa8.92□□□□□ -0.98
GGPS1-203ENST00000391855 FAM159AQ6UWV7 190 aa8.92□□□□□ -0.98
GGPS1-203ENST00000391855 UBE2DNLQ8IWF7 75 aa8.92□□□□□ -0.98
GGPS1-203ENST00000391855 CYB561D1Q8N8Q1 229 aa8.92□□□□□ -0.98
GGPS1-203ENST00000391855 OR11H4Q8NGC9 324 aa8.92□□□□□ -0.98
GGPS1-203ENST00000391855 ATG101Q9BSB4 218 aa8.92□□□□□ -0.98
GGPS1-203ENST00000391855 TREM1Q9NP99 234 aa8.92□□□□□ -0.98
GGPS1-203ENST00000391855 MAP1LC3B2A6NCE7 125 aa8.91□□□□□ -0.98
GGPS1-203ENST00000391855 SPINK4O60575 86 aa8.91□□□□□ -0.98
GGPS1-203ENST00000391855 FAM3BP58499 235 aaPredicted RBP8.91□□□□□ -0.98
GGPS1-203ENST00000391855 TDRG1Q3Y452 100 aa8.91□□□□□ -0.98
GGPS1-203ENST00000391855 TMEM75Q8N9X5 138 aa8.91□□□□□ -0.98
GGPS1-203ENST00000391855 ZNF471Q9BX82 626 aaPredicted RBP8.91□□□□□ -0.98
GGPS1-203ENST00000391855 MAP1LC3BQ9GZQ8 125 aa8.91□□□□□ -0.98
GGPS1-203ENST00000391855 EPDR1Q9UM22 224 aa8.91□□□□□ -0.98
GGPS1-203ENST00000391855 KLF12Q9Y4X4 402 aa8.91□□□□□ -0.98
GGPS1-203ENST00000391855 DNAH6Q9C0G6 4158 aa8.91□□□□□ -0.98
GGPS1-203ENST00000391855 TRGV2A0A075B6R0 118 aa8.9□□□□□ -0.98
GGPS1-203ENST00000391855 TRGV1A0A0A0MS02 117 aa8.9□□□□□ -0.98
GGPS1-203ENST00000391855 TRAV8-1A0A0A6YYK1 113 aa8.9□□□□□ -0.98
GGPS1-203ENST00000391855 H3BNG1 76 aa8.9□□□□□ -0.98
GGPS1-203ENST00000391855 PFDN1O60925 122 aa8.9□□□□□ -0.98
GGPS1-203ENST00000391855 PPT1P50897 306 aa8.9□□□□□ -0.98
GGPS1-203ENST00000391855 FLI1Q01543 452 aaPredicted RBP8.9□□□□□ -0.98
GGPS1-203ENST00000391855 ZFP69Q49AA0 526 aa8.9□□□□□ -0.98
GGPS1-203ENST00000391855 DPPA3Q6W0C5 159 aa8.9□□□□□ -0.98
GGPS1-203ENST00000391855 Q6ZTI0 123 aa8.9□□□□□ -0.98
GGPS1-203ENST00000391855 KCNS1Q96KK3 526 aa8.9□□□□□ -0.98
GGPS1-203ENST00000391855 TCEAL7Q9BRU2 100 aa8.9□□□□□ -0.98
GGPS1-203ENST00000391855 SPXQ9BT56 116 aa8.9□□□□□ -0.98
GGPS1-203ENST00000391855 PSG8Q9UQ74 426 aa8.9□□□□□ -0.98
GGPS1-203ENST00000391855 ARL2-SNX15V9GYD0 113 aa8.9□□□□□ -0.98
GGPS1-203ENST00000391855 TPT1P13693 172 aaKnown RBP8.89□□□□□ -0.99
GGPS1-203ENST00000391855 MUC21Q5SSG8 566 aa8.89□□□□□ -0.99
GGPS1-203ENST00000391855 SAPCD1Q5SSQ6 148 aa8.89□□□□□ -0.99
GGPS1-203ENST00000391855 TCTE3Q8IZS6 198 aa8.89□□□□□ -0.99
GGPS1-203ENST00000391855 HIST1H2BAQ96A08 127 aa8.89□□□□□ -0.99
GGPS1-203ENST00000391855 TP53TG3Q9ULZ0 132 aa8.89□□□□□ -0.99
GGPS1-203ENST00000391855 F6UZH7 168 aa8.88□□□□□ -0.99
GGPS1-203ENST00000391855 IFNA7P01567 189 aa8.88□□□□□ -0.99
GGPS1-203ENST00000391855 OR5I1Q13606 314 aa8.88□□□□□ -0.99
GGPS1-203ENST00000391855 Q6ZNX1 250 aa8.88□□□□□ -0.99
GGPS1-203ENST00000391855 TMPRSS5Q9H3S3 457 aa8.88□□□□□ -0.99
GGPS1-203ENST00000391855 FAM74A7A6NL05 159 aa8.88□□□□□ -0.99
GGPS1-203ENST00000391855 PEX7O00628 323 aa8.88□□□□□ -0.99
GGPS1-203ENST00000391855 NUDT3O95989 172 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms