RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 SPXQ9BT56 116 aa9.88□□□□□ -0.83
KCNQ3-201ENST00000388996 ETV2O00321 342 aaPredicted RBP9.88□□□□□ -0.83
KCNQ3-201ENST00000388996 GAGE2BQ13066 116 aa9.88□□□□□ -0.83
KCNQ3-201ENST00000388996 NEGR1Q7Z3B1 354 aa9.88□□□□□ -0.83
KCNQ3-201ENST00000388996 ANAPC10Q9UM13 185 aa9.88□□□□□ -0.83
KCNQ3-201ENST00000388996 G3V318 75 aa9.87□□□□□ -0.83
KCNQ3-201ENST00000388996 CHAC1Q9BUX1 264 aa9.87□□□□□ -0.83
KCNQ3-201ENST00000388996 VWC2LB2RUY7 222 aa9.87□□□□□ -0.83
KCNQ3-201ENST00000388996 TP53TG1Q9Y2A0 90 aa9.87□□□□□ -0.83
KCNQ3-201ENST00000388996 NDUFA4O00483 81 aa9.87□□□□□ -0.83
KCNQ3-201ENST00000388996 ZNF561-AS1K7EIQ3 104 aa9.87□□□□□ -0.83
KCNQ3-201ENST00000388996 PAX9P55771 341 aa9.87□□□□□ -0.83
KCNQ3-201ENST00000388996 HIST1H4AP62805 103 aaKnown RBP9.87□□□□□ -0.83
KCNQ3-201ENST00000388996 THAP8Q8NA92 274 aa9.87□□□□□ -0.83
KCNQ3-201ENST00000388996 ARMS2P0C7Q2 107 aa9.87□□□□□ -0.83
KCNQ3-201ENST00000388996 PRSS46E5RG02 174 aa9.87□□□□□ -0.83
KCNQ3-201ENST00000388996 FHL1Q13642 323 aa9.87□□□□□ -0.83
KCNQ3-201ENST00000388996 E9PQ18 207 aa9.87□□□□□ -0.83
KCNQ3-201ENST00000388996 HS3ST6Q96QI5 342 aa9.87□□□□□ -0.83
KCNQ3-201ENST00000388996 GAGE2AQ6NT46 116 aa9.86□□□□□ -0.83
KCNQ3-201ENST00000388996 TRBV19A0A075B6N1 114 aa9.86□□□□□ -0.83
KCNQ3-201ENST00000388996 EREGO14944 169 aa9.86□□□□□ -0.83
KCNQ3-201ENST00000388996 TCTEX1D4Q5JR98 221 aa9.86□□□□□ -0.83
KCNQ3-201ENST00000388996 DNAJC30Q96LL9 226 aa9.86□□□□□ -0.83
KCNQ3-201ENST00000388996 LINC00479Q96M42 142 aa9.86□□□□□ -0.83
KCNQ3-201ENST00000388996 TMEM243Q9BU79 118 aa9.86□□□□□ -0.83
KCNQ3-201ENST00000388996 CDKN1BP46527 198 aa9.86□□□□□ -0.83
KCNQ3-201ENST00000388996 TEX36Q5VZQ5 186 aa9.86□□□□□ -0.83
KCNQ3-201ENST00000388996 FAM231BA6NCW3 169 aa9.86□□□□□ -0.83
KCNQ3-201ENST00000388996 IGHV3-16A0A0C4DH30 117 aa9.86□□□□□ -0.83
KCNQ3-201ENST00000388996 SNHG12Q9BXW3 62 aa9.86□□□□□ -0.83
KCNQ3-201ENST00000388996 RMI2Q96E14 147 aa9.86□□□□□ -0.83
KCNQ3-201ENST00000388996 ZNF114Q8NC26 417 aa9.85□□□□□ -0.83
KCNQ3-201ENST00000388996 IGHV1OR15-1A0A075B7D0 117 aa9.85□□□□□ -0.83
KCNQ3-201ENST00000388996 C3orf79P0CE67 100 aa9.85□□□□□ -0.83
KCNQ3-201ENST00000388996 AZU1P20160 251 aa9.85□□□□□ -0.83
KCNQ3-201ENST00000388996 LMO1P25800 156 aa9.85□□□□□ -0.83
KCNQ3-201ENST00000388996 MRPL52Q86TS9 123 aaKnown RBP9.85□□□□□ -0.83
KCNQ3-201ENST00000388996 ZNF48Q96MX3 618 aaPredicted RBP9.85□□□□□ -0.83
KCNQ3-201ENST00000388996 MCRIP2Q9BUT9 160 aaKnown RBP9.85□□□□□ -0.83
KCNQ3-201ENST00000388996 TMEM14CQ9P0S9 112 aa9.85□□□□□ -0.83
KCNQ3-201ENST00000388996 LOXP28300 417 aaPredicted RBP9.85□□□□□ -0.83
KCNQ3-201ENST00000388996 ZNF134P52741 427 aa9.85□□□□□ -0.83
KCNQ3-201ENST00000388996 GAGE12JA6NER3 117 aa9.84□□□□□ -0.83
KCNQ3-201ENST00000388996 GAGE1Q13065 139 aa9.84□□□□□ -0.83
KCNQ3-201ENST00000388996 GAGE4Q13068 117 aa9.84□□□□□ -0.83
KCNQ3-201ENST00000388996 GAGE5Q13069 117 aa9.84□□□□□ -0.83
KCNQ3-201ENST00000388996 TRAV8-3A0A0A6YYJ7 113 aa9.84□□□□□ -0.83
KCNQ3-201ENST00000388996 TMEM213A2RRL7 107 aa9.84□□□□□ -0.83
KCNQ3-201ENST00000388996 A0A0G2JRQ6 117 aa9.84□□□□□ -0.83
KCNQ3-201ENST00000388996 HECTD1Q9ULT8 2610 aa9.84□□□□□ -0.83
KCNQ3-201ENST00000388996 LINC00311Q8N616 119 aa9.84□□□□□ -0.83
KCNQ3-201ENST00000388996 C17orf58Q2M2W7 97 aa9.84□□□□□ -0.83
KCNQ3-201ENST00000388996 VWC2Q2TAL6 325 aa9.83□□□□□ -0.84
KCNQ3-201ENST00000388996 IGHV7-4-1A0A0J9YVY3 117 aa9.83□□□□□ -0.84
KCNQ3-201ENST00000388996 PMVKQ15126 192 aa9.83□□□□□ -0.84
KCNQ3-201ENST00000388996 SRSF2Q01130 221 aaKnown RBP9.83□□□□□ -0.84
KCNQ3-201ENST00000388996 Q8N8P6 123 aa9.83□□□□□ -0.84
KCNQ3-201ENST00000388996 KNCNA6PVL3 124 aa9.83□□□□□ -0.84
KCNQ3-201ENST00000388996 CR1LQ2VPA4 569 aa9.83□□□□□ -0.84
KCNQ3-201ENST00000388996 Q71RC1 249 aaPredicted RBP9.83□□□□□ -0.84
KCNQ3-201ENST00000388996 FAM104BQ5XKR9 115 aa9.83□□□□□ -0.84
KCNQ3-201ENST00000388996 ZNF625Q96I27 306 aaPredicted RBP9.83□□□□□ -0.84
KCNQ3-201ENST00000388996 MST1LQ2TV78 715 aa9.83□□□□□ -0.84
KCNQ3-201ENST00000388996 INAFM2P0DMQ5 153 aa9.82□□□□□ -0.84
KCNQ3-201ENST00000388996 HOXB4P17483 251 aaPredicted RBP9.82□□□□□ -0.84
KCNQ3-201ENST00000388996 ATP6V0BQ99437 205 aa9.82□□□□□ -0.84
KCNQ3-201ENST00000388996 FAM215AQ9Y5M1 114 aa9.82□□□□□ -0.84
KCNQ3-201ENST00000388996 H3BMM0 161 aa9.82□□□□□ -0.84
KCNQ3-201ENST00000388996 J3QKU1 62 aa9.82□□□□□ -0.84
KCNQ3-201ENST00000388996 C1orf122Q6ZSJ8 110 aa9.82□□□□□ -0.84
KCNQ3-201ENST00000388996 MPV17L2Q567V2 206 aa9.82□□□□□ -0.84
KCNQ3-201ENST00000388996 H3BRN7 92 aa9.82□□□□□ -0.84
KCNQ3-201ENST00000388996 WDR86Q86TI4 376 aa9.82□□□□□ -0.84
KCNQ3-201ENST00000388996 SUMO4Q6EEV6 95 aa9.82□□□□□ -0.84
KCNQ3-201ENST00000388996 Q6ZR03 302 aa9.82□□□□□ -0.84
KCNQ3-201ENST00000388996 TRAV12-2A0A075B6T6 113 aa9.82□□□□□ -0.84
KCNQ3-201ENST00000388996 PLA2G2CQ5R387 149 aa9.82□□□□□ -0.84
KCNQ3-201ENST00000388996 MLANAQ16655 118 aa9.81□□□□□ -0.84
KCNQ3-201ENST00000388996 SDHAF1A6NFY7 115 aa9.81□□□□□ -0.84
KCNQ3-201ENST00000388996 RPL32P62910 135 aaKnown RBP9.81□□□□□ -0.84
KCNQ3-201ENST00000388996 STPG4Q8N801 248 aa9.81□□□□□ -0.84
KCNQ3-201ENST00000388996 GAGE12BA1L429 117 aa9.81□□□□□ -0.84
KCNQ3-201ENST00000388996 GAGE7O76087 117 aa9.81□□□□□ -0.84
KCNQ3-201ENST00000388996 GAGE12FP0CL80 117 aa9.81□□□□□ -0.84
KCNQ3-201ENST00000388996 GAGE12GP0CL81 117 aa9.81□□□□□ -0.84
KCNQ3-201ENST00000388996 GAGE12IP0CL82 117 aa9.81□□□□□ -0.84
KCNQ3-201ENST00000388996 ADAMTSL5Q6ZMM2 481 aa9.81□□□□□ -0.84
KCNQ3-201ENST00000388996 IGLV3-9A0A075B6K5 115 aa9.81□□□□□ -0.84
KCNQ3-201ENST00000388996 MRPL51Q4U2R6 128 aaKnown RBP9.81□□□□□ -0.84
KCNQ3-201ENST00000388996 C15orf65H3BRN8 121 aa9.81□□□□□ -0.84
KCNQ3-201ENST00000388996 C2orf66Q6UXQ4 117 aa9.8□□□□□ -0.84
KCNQ3-201ENST00000388996 C18orf32Q8TCD1 76 aa9.8□□□□□ -0.84
KCNQ3-201ENST00000388996 COX11Q9Y6N1 276 aa9.8□□□□□ -0.84
KCNQ3-201ENST00000388996 WT1-ASQ06250 92 aa9.8□□□□□ -0.84
KCNQ3-201ENST00000388996 PIP4P1Q86T03 277 aa9.8□□□□□ -0.84
KCNQ3-201ENST00000388996 VPREB3Q9UKI3 123 aa9.8□□□□□ -0.84
KCNQ3-201ENST00000388996 OCIAD2Q56VL3 154 aa9.8□□□□□ -0.84
KCNQ3-201ENST00000388996 PROK2Q9HC23 129 aa9.8□□□□□ -0.84
KCNQ3-201ENST00000388996 IGLV1-44P01699 117 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms