RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 PRSS46E5RG02 174 aa9.58□□□□□ -0.88
GABPB1-203ENST00000380877 K7EN84 100 aa9.58□□□□□ -0.88
GABPB1-203ENST00000380877 C3orf79P0CE67 100 aa9.58□□□□□ -0.88
GABPB1-203ENST00000380877 Q0VG73 95 aa9.58□□□□□ -0.88
GABPB1-203ENST00000380877 COL4A2P08572 1712 aa9.58□□□□□ -0.88
GABPB1-203ENST00000380877 A8MWP6 167 aa9.58□□□□□ -0.88
GABPB1-203ENST00000380877 FABP2P12104 132 aa9.58□□□□□ -0.88
GABPB1-203ENST00000380877 DEFB104AQ8WTQ1 72 aa9.58□□□□□ -0.88
GABPB1-203ENST00000380877 NDUFAF3Q9BU61 184 aa9.58□□□□□ -0.88
GABPB1-203ENST00000380877 MS4A6AQ9H2W1 248 aa9.58□□□□□ -0.88
GABPB1-203ENST00000380877 JMJD1CQ15652 2540 aa9.58□□□□□ -0.88
GABPB1-203ENST00000380877 SMIM27A0A1W2PRY6 76 aa9.58□□□□□ -0.88
GABPB1-203ENST00000380877 C18orf32Q8TCD1 76 aa9.58□□□□□ -0.88
GABPB1-203ENST00000380877 FAM167A-AS1Q96KT0 104 aa9.58□□□□□ -0.88
GABPB1-203ENST00000380877 XCL2Q9UBD3 114 aa9.58□□□□□ -0.88
GABPB1-203ENST00000380877 C2CD3Q4AC94 2353 aa9.58□□□□□ -0.88
GABPB1-203ENST00000380877 GAGE10A6NGK3 116 aa9.58□□□□□ -0.88
GABPB1-203ENST00000380877 EIF4EBP1Q13541 118 aaPredicted RBP9.58□□□□□ -0.88
GABPB1-203ENST00000380877 LINC01549A6NIU2 74 aa9.57□□□□□ -0.88
GABPB1-203ENST00000380877 LTAP01374 205 aa9.57□□□□□ -0.88
GABPB1-203ENST00000380877 HOXD3P31249 432 aaPredicted RBP9.57□□□□□ -0.88
GABPB1-203ENST00000380877 FAM104BQ5XKR9 115 aa9.57□□□□□ -0.88
GABPB1-203ENST00000380877 ZNF295-AS1Q8N0V1 137 aa9.57□□□□□ -0.88
GABPB1-203ENST00000380877 ARHGAP32A7KAX9 2087 aa9.57□□□□□ -0.88
GABPB1-203ENST00000380877 H3BRM9 83 aa9.57□□□□□ -0.88
GABPB1-203ENST00000380877 LGALS1P09382 135 aaKnown RBP9.57□□□□□ -0.88
GABPB1-203ENST00000380877 OR2K2Q8NGT1 345 aa9.57□□□□□ -0.88
GABPB1-203ENST00000380877 ODF3BA8MYP8 253 aa9.57□□□□□ -0.88
GABPB1-203ENST00000380877 VCYO14598 125 aa9.57□□□□□ -0.88
GABPB1-203ENST00000380877 IGHV3-53P01767 116 aa9.57□□□□□ -0.88
GABPB1-203ENST00000380877 CD28P10747 220 aa9.57□□□□□ -0.88
GABPB1-203ENST00000380877 SLAQ13239 276 aa9.57□□□□□ -0.88
GABPB1-203ENST00000380877 DYNAPQ8N1N2 210 aa9.57□□□□□ -0.88
GABPB1-203ENST00000380877 AGPAT4-IT1Q9H0P7 198 aa9.57□□□□□ -0.88
GABPB1-203ENST00000380877 COX6CP09669 75 aa9.56□□□□□ -0.88
GABPB1-203ENST00000380877 LINC01559Q495D7 138 aa9.56□□□□□ -0.88
GABPB1-203ENST00000380877 C11orf71Q6IPW1 123 aa9.56□□□□□ -0.88
GABPB1-203ENST00000380877 AJUBAQ96IF1 538 aa9.56□□□□□ -0.88
GABPB1-203ENST00000380877 CSTL1Q9H114 145 aa9.56□□□□□ -0.88
GABPB1-203ENST00000380877 ZMAT5Q9UDW3 170 aaKnown RBP9.56□□□□□ -0.88
GABPB1-203ENST00000380877 LAMTOR2Q9Y2Q5 125 aa9.56□□□□□ -0.88
GABPB1-203ENST00000380877 EPG5Q9HCE0 2579 aa9.56□□□□□ -0.88
GABPB1-203ENST00000380877 CDKN1BP46527 198 aa9.56□□□□□ -0.88
GABPB1-203ENST00000380877 KLK9Q9UKQ9 250 aa9.56□□□□□ -0.88
GABPB1-203ENST00000380877 CHD9Q3L8U1 2897 aa9.56□□□□□ -0.88
GABPB1-203ENST00000380877 TNFRSF6BO95407 300 aa9.56□□□□□ -0.88
GABPB1-203ENST00000380877 DEFB136Q30KP8 78 aa9.56□□□□□ -0.88
GABPB1-203ENST00000380877 ANXA2RQ3ZCQ2 193 aa9.56□□□□□ -0.88
GABPB1-203ENST00000380877 CHTOPQ9Y3Y2 248 aaKnown RBP9.56□□□□□ -0.88
GABPB1-203ENST00000380877 TRAV12-2A0A075B6T6 113 aa9.56□□□□□ -0.88
GABPB1-203ENST00000380877 RPL36AP83881 106 aaKnown RBP9.56□□□□□ -0.88
GABPB1-203ENST00000380877 CDSNQ15517 529 aa9.56□□□□□ -0.88
GABPB1-203ENST00000380877 C3orf56Q8N813 242 aa9.56□□□□□ -0.88
GABPB1-203ENST00000380877 TMEM158Q8WZ71 300 aa9.56□□□□□ -0.88
GABPB1-203ENST00000380877 RPL36ALQ969Q0 106 aaKnown RBP9.56□□□□□ -0.88
GABPB1-203ENST00000380877 FANCD2OSQ96PS1 177 aa9.56□□□□□ -0.88
GABPB1-203ENST00000380877 F6UB75 175 aa9.55□□□□□ -0.88
GABPB1-203ENST00000380877 IGKCP01834 107 aa9.55□□□□□ -0.88
GABPB1-203ENST00000380877 ALKBH7Q9BT30 221 aaPredicted RBP9.55□□□□□ -0.88
GABPB1-203ENST00000380877 TOMM7Q9P0U1 55 aa9.55□□□□□ -0.88
GABPB1-203ENST00000380877 BUB3O43684 328 aa9.55□□□□□ -0.88
GABPB1-203ENST00000380877 FOXE3Q13461 319 aa9.55□□□□□ -0.88
GABPB1-203ENST00000380877 MRAP2Q96G30 205 aa9.55□□□□□ -0.88
GABPB1-203ENST00000380877 FASNP49327 2511 aaKnown RBP9.55□□□□□ -0.88
GABPB1-203ENST00000380877 IGHG2P01859 326 aa9.55□□□□□ -0.88
GABPB1-203ENST00000380877 CHCHD5Q9BSY4 110 aa9.55□□□□□ -0.88
GABPB1-203ENST00000380877 IGHV1OR15-1A0A075B7D0 117 aa9.54□□□□□ -0.88
GABPB1-203ENST00000380877 KNCNA6PVL3 124 aa9.54□□□□□ -0.88
GABPB1-203ENST00000380877 ZNF462Q96JM2 2506 aa9.54□□□□□ -0.88
GABPB1-203ENST00000380877 C5orf42Q9H799 3197 aa9.54□□□□□ -0.88
GABPB1-203ENST00000380877 SYS1-DBNDD2H3BUS1 97 aa9.54□□□□□ -0.88
GABPB1-203ENST00000380877 MKI67P46013 3256 aaKnown RBP9.54□□□□□ -0.88
GABPB1-203ENST00000380877 RIPPLY3P57055 190 aa9.54□□□□□ -0.88
GABPB1-203ENST00000380877 COPS9Q8WXC6 57 aa9.54□□□□□ -0.88
GABPB1-203ENST00000380877 A0A1B0GV90 55 aa9.53□□□□□ -0.88
GABPB1-203ENST00000380877 ARL6IP6Q8N6S5 226 aa9.53□□□□□ -0.88
GABPB1-203ENST00000380877 IGKV3D-20A0A0C4DH25 116 aa9.53□□□□□ -0.88
GABPB1-203ENST00000380877 PRSS57Q6UWY2 283 aa9.53□□□□□ -0.88
GABPB1-203ENST00000380877 BCL6BQ8N143 479 aaPredicted RBP9.53□□□□□ -0.88
GABPB1-203ENST00000380877 PRRC2AP48634 2157 aaKnown RBP9.53□□□□□ -0.88
GABPB1-203ENST00000380877 SMIM13P0DJ93 91 aa9.53□□□□□ -0.88
GABPB1-203ENST00000380877 CFHR4Q92496 578 aa9.53□□□□□ -0.88
GABPB1-203ENST00000380877 MRPL53Q96EL3 112 aaKnown RBP9.53□□□□□ -0.88
GABPB1-203ENST00000380877 PRADC1Q9BSG0 188 aa9.53□□□□□ -0.88
GABPB1-203ENST00000380877 LOXL1Q08397 574 aaPredicted RBP9.53□□□□□ -0.88
GABPB1-203ENST00000380877 CD300EQ496F6 205 aaPredicted RBP9.53□□□□□ -0.88
GABPB1-203ENST00000380877 ATP6V0BQ99437 205 aa9.53□□□□□ -0.88
GABPB1-203ENST00000380877 WI2-2373I1.2A0A1W2PRP0 233 aa9.52□□□□□ -0.88
GABPB1-203ENST00000380877 MRPL51Q4U2R6 128 aaKnown RBP9.52□□□□□ -0.88
GABPB1-203ENST00000380877 ATG2AQ2TAZ0 1938 aa9.52□□□□□ -0.89
GABPB1-203ENST00000380877 ZNF843Q8N446 348 aa9.52□□□□□ -0.89
GABPB1-203ENST00000380877 SORL1Q92673 2214 aa9.52□□□□□ -0.89
GABPB1-203ENST00000380877 IGKV1D-37A0A075B6S9 117 aa9.52□□□□□ -0.89
GABPB1-203ENST00000380877 MCRIP2Q9BUT9 160 aaKnown RBP9.52□□□□□ -0.89
GABPB1-203ENST00000380877 EGR2P11161 476 aaPredicted RBP9.52□□□□□ -0.89
GABPB1-203ENST00000380877 LENEPQ9Y5L5 61 aa9.52□□□□□ -0.89
GABPB1-203ENST00000380877 EXPH5Q8NEV8 1989 aa9.51□□□□□ -0.89
GABPB1-203ENST00000380877 TNFRSF13BO14836 293 aaPredicted RBP9.51□□□□□ -0.89
GABPB1-203ENST00000380877 A6NDX4 124 aa9.51□□□□□ -0.89
GABPB1-203ENST00000380877 CCL24O00175 119 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms