RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 NAGKQ9UJ70 344 aa8.14□□□□□ -1.11
SMARCE1-203ENST00000377808 TP53TG3Q9ULZ0 132 aa8.14□□□□□ -1.11
SMARCE1-203ENST00000377808 TNFSF18Q9UNG2 199 aa8.14□□□□□ -1.11
SMARCE1-203ENST00000377808 DNAH10Q8IVF4 4471 aa8.14□□□□□ -1.11
SMARCE1-203ENST00000377808 RNF222A6NCQ9 220 aa8.13□□□□□ -1.11
SMARCE1-203ENST00000377808 ARPC5O15511 151 aa8.13□□□□□ -1.11
SMARCE1-203ENST00000377808 NMBP08949 121 aa8.13□□□□□ -1.11
SMARCE1-203ENST00000377808 SERF2P84101 59 aa8.13□□□□□ -1.11
SMARCE1-203ENST00000377808 GNPNAT1Q96EK6 184 aaPredicted RBP8.13□□□□□ -1.11
SMARCE1-203ENST00000377808 ACTR3CQ9C0K3 210 aaPredicted RBP8.13□□□□□ -1.11
SMARCE1-203ENST00000377808 TMPRSS5Q9H3S3 457 aa8.13□□□□□ -1.11
SMARCE1-203ENST00000377808 TRAV26-1A0A087WT03 109 aa8.12□□□□□ -1.11
SMARCE1-203ENST00000377808 F6UZH7 168 aa8.12□□□□□ -1.11
SMARCE1-203ENST00000377808 SMLR1H3BR10 107 aa8.12□□□□□ -1.11
SMARCE1-203ENST00000377808 STAG3L2P0CL84 134 aa8.12□□□□□ -1.11
SMARCE1-203ENST00000377808 STAG3L3P0CL85 134 aa8.12□□□□□ -1.11
SMARCE1-203ENST00000377808 GCHFRP30047 84 aa8.12□□□□□ -1.11
SMARCE1-203ENST00000377808 DAZ2Q13117 558 aaKnown RBP8.12□□□□□ -1.11
SMARCE1-203ENST00000377808 ANXA2RQ3ZCQ2 193 aa8.12□□□□□ -1.11
SMARCE1-203ENST00000377808 C11orf72Q8NBR9 251 aa8.12□□□□□ -1.11
SMARCE1-203ENST00000377808 SGK494Q96LW2 274 aa8.12□□□□□ -1.11
SMARCE1-203ENST00000377808 KLF12Q9Y4X4 402 aa8.12□□□□□ -1.11
SMARCE1-203ENST00000377808 TRAV8-1A0A0A6YYK1 113 aa8.11□□□□□ -1.11
SMARCE1-203ENST00000377808 TRBV7-9A0A0J9YWB2 115 aa8.11□□□□□ -1.11
SMARCE1-203ENST00000377808 CXorf1O96002 111 aa8.11□□□□□ -1.11
SMARCE1-203ENST00000377808 IGHV3-53P01767 116 aa8.11□□□□□ -1.11
SMARCE1-203ENST00000377808 CCL18P55774 89 aa8.11□□□□□ -1.11
SMARCE1-203ENST00000377808 TCL1AP56279 114 aa8.11□□□□□ -1.11
SMARCE1-203ENST00000377808 ZNF415Q09FC8 603 aa8.11□□□□□ -1.11
SMARCE1-203ENST00000377808 RNF212Q495C1 297 aa8.11□□□□□ -1.11
SMARCE1-203ENST00000377808 AKR1C8PQ5T2L2 129 aa8.11□□□□□ -1.11
SMARCE1-203ENST00000377808 LINC00612Q8N6U2 182 aa8.11□□□□□ -1.11
SMARCE1-203ENST00000377808 LINC00467Q9BRT7 94 aa8.11□□□□□ -1.11
SMARCE1-203ENST00000377808 MRPL16Q9NX20 251 aaKnown RBP8.11□□□□□ -1.11
SMARCE1-203ENST00000377808 HOXA5P20719 270 aa8.1□□□□□ -1.11
SMARCE1-203ENST00000377808 TMEM183BQ1AE95 376 aa8.1□□□□□ -1.11
SMARCE1-203ENST00000377808 IBA57Q5T440 356 aaKnown RBP8.1□□□□□ -1.11
SMARCE1-203ENST00000377808 FAM159AQ6UWV7 190 aa8.1□□□□□ -1.11
SMARCE1-203ENST00000377808 SSX7Q7RTT5 188 aa8.1□□□□□ -1.11
SMARCE1-203ENST00000377808 TMEM183AQ8IXX5 376 aa8.1□□□□□ -1.11
SMARCE1-203ENST00000377808 TMED6Q8WW62 240 aa8.1□□□□□ -1.11
SMARCE1-203ENST00000377808 ST6GAL2Q96JF0 529 aa8.1□□□□□ -1.11
SMARCE1-203ENST00000377808 NDFIP1Q9BT67 221 aa8.1□□□□□ -1.11
SMARCE1-203ENST00000377808 TREM1Q9NP99 234 aa8.1□□□□□ -1.11
SMARCE1-203ENST00000377808 TMEM167BQ9NRX6 74 aa8.1□□□□□ -1.11
SMARCE1-203ENST00000377808 G3V3Q6 166 aa8.09□□□□□ -1.11
SMARCE1-203ENST00000377808 K7EQM0 130 aa8.09□□□□□ -1.11
SMARCE1-203ENST00000377808 TAAR5O14804 337 aa8.09□□□□□ -1.11
SMARCE1-203ENST00000377808 SPINK4O60575 86 aa8.09□□□□□ -1.11
SMARCE1-203ENST00000377808 Q6AWC8 147 aa8.09□□□□□ -1.11
SMARCE1-203ENST00000377808 LENEPQ9Y5L5 61 aa8.09□□□□□ -1.11
SMARCE1-203ENST00000377808 TRGV11A0A075B6L2 103 aa8.08□□□□□ -1.12
SMARCE1-203ENST00000377808 TRAV21A0A0B4J279 112 aa8.08□□□□□ -1.12
SMARCE1-203ENST00000377808 CTXND1A0A1B0GTU2 59 aa8.08□□□□□ -1.12
SMARCE1-203ENST00000377808 TCRAP04437 139 aa8.08□□□□□ -1.12
SMARCE1-203ENST00000377808 FGF8P55075 233 aaPredicted RBP8.08□□□□□ -1.12
SMARCE1-203ENST00000377808 UBE2G2P60604 165 aa8.08□□□□□ -1.12
SMARCE1-203ENST00000377808 SUMO1P63165 101 aaKnown RBP8.08□□□□□ -1.12
SMARCE1-203ENST00000377808 C5orf17Q8NAS9 161 aa8.08□□□□□ -1.12
SMARCE1-203ENST00000377808 DNAH2Q9P225 4427 aa8.07□□□□□ -1.12
SMARCE1-203ENST00000377808 SERTM2A0A1B0GWG4 89 aa8.07□□□□□ -1.12
SMARCE1-203ENST00000377808 GGTLC3B5MD39 225 aa8.07□□□□□ -1.12
SMARCE1-203ENST00000377808 FAM3BP58499 235 aaPredicted RBP8.07□□□□□ -1.12
SMARCE1-203ENST00000377808 LGALS9BQ3B8N2 356 aa8.07□□□□□ -1.12
SMARCE1-203ENST00000377808 ZFP69Q49AA0 526 aa8.07□□□□□ -1.12
SMARCE1-203ENST00000377808 PRNTQ86SH4 94 aa8.07□□□□□ -1.12
SMARCE1-203ENST00000377808 ARL6IP6Q8N6S5 226 aa8.07□□□□□ -1.12
SMARCE1-203ENST00000377808 MDFICQ9P1T7 246 aa8.07□□□□□ -1.12
SMARCE1-203ENST00000377808 LINC00588Q9Y4M8 146 aa8.07□□□□□ -1.12
SMARCE1-203ENST00000377808 IFNA7P01567 189 aa8.06□□□□□ -1.12
SMARCE1-203ENST00000377808 ZNF726P1Q15940 193 aa8.06□□□□□ -1.12
SMARCE1-203ENST00000377808 SOHLH1Q5JUK2 328 aa8.06□□□□□ -1.12
SMARCE1-203ENST00000377808 LINC00336Q6ZUF6 198 aa8.06□□□□□ -1.12
SMARCE1-203ENST00000377808 CYB561D1Q8N8Q1 229 aa8.06□□□□□ -1.12
SMARCE1-203ENST00000377808 TVP23CQ96ET8 276 aa8.06□□□□□ -1.12
SMARCE1-203ENST00000377808 C8orf49Q96NF6 230 aa8.06□□□□□ -1.12
SMARCE1-203ENST00000377808 SDF2L1Q9HCN8 221 aa8.06□□□□□ -1.12
SMARCE1-203ENST00000377808 EPDR1Q9UM22 224 aa8.06□□□□□ -1.12
SMARCE1-203ENST00000377808 PSG8Q9UQ74 426 aa8.06□□□□□ -1.12
SMARCE1-203ENST00000377808 TRGV4A0A0C4DH28 118 aa8.05□□□□□ -1.12
SMARCE1-203ENST00000377808 A0A1W2PRE2 83 aa8.05□□□□□ -1.12
SMARCE1-203ENST00000377808 MAP1LC3B2A6NCE7 125 aa8.05□□□□□ -1.12
SMARCE1-203ENST00000377808 PRSS29PA6NIE9 313 aa8.05□□□□□ -1.12
SMARCE1-203ENST00000377808 PAX4O43316 350 aa8.05□□□□□ -1.12
SMARCE1-203ENST00000377808 GNRH2O43555 120 aa8.05□□□□□ -1.12
SMARCE1-203ENST00000377808 FLI1Q01543 452 aaPredicted RBP8.05□□□□□ -1.12
SMARCE1-203ENST00000377808 SUN5Q8TC36 379 aa8.05□□□□□ -1.12
SMARCE1-203ENST00000377808 C18orf15Q96N68 181 aa8.05□□□□□ -1.12
SMARCE1-203ENST00000377808 ZNF471Q9BX82 626 aaPredicted RBP8.05□□□□□ -1.12
SMARCE1-203ENST00000377808 MAP1LC3BQ9GZQ8 125 aa8.05□□□□□ -1.12
SMARCE1-203ENST00000377808 CYTL1Q9NRR1 136 aa8.05□□□□□ -1.12
SMARCE1-203ENST00000377808 NACAE9PAV3 2078 aa8.05□□□□□ -1.12
SMARCE1-203ENST00000377808 TRAV34A0A0B4J273 112 aa8.04□□□□□ -1.12
SMARCE1-203ENST00000377808 KANTRA0A1W2PQU2 76 aa8.04□□□□□ -1.12
SMARCE1-203ENST00000377808 GCGP01275 180 aa8.04□□□□□ -1.12
SMARCE1-203ENST00000377808 TYMSP04818 313 aa8.04□□□□□ -1.12
SMARCE1-203ENST00000377808 SFTA3P0C7M3 94 aa8.04□□□□□ -1.12
SMARCE1-203ENST00000377808 SMUG1Q53HV7 270 aa8.04□□□□□ -1.12
SMARCE1-203ENST00000377808 C1orf134Q5TEV5 83 aa8.04□□□□□ -1.12
SMARCE1-203ENST00000377808 Q6ZR54 194 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms