RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 IGHV1OR15-1A0A075B7D0 117 aa11.8□□□□□ -0.52
HMGN4-201ENST00000377575 RNF222A6NCQ9 220 aa11.8□□□□□ -0.52
HMGN4-201ENST00000377575 STAG3L2P0CL84 134 aa11.8□□□□□ -0.52
HMGN4-201ENST00000377575 STAG3L3P0CL85 134 aa11.8□□□□□ -0.52
HMGN4-201ENST00000377575 TCL1AP56279 114 aa11.8□□□□□ -0.52
HMGN4-201ENST00000377575 OR5I1Q13606 314 aa11.8□□□□□ -0.52
HMGN4-201ENST00000377575 Q6ZTI0 123 aa11.8□□□□□ -0.52
HMGN4-201ENST00000377575 ARL6IP6Q8N6S5 226 aa11.8□□□□□ -0.52
HMGN4-201ENST00000377575 GNPNAT1Q96EK6 184 aaPredicted RBP11.8□□□□□ -0.52
HMGN4-201ENST00000377575 TRGV2A0A075B6R0 118 aa11.79□□□□□ -0.52
HMGN4-201ENST00000377575 LGALS9BQ3B8N2 356 aa11.79□□□□□ -0.52
HMGN4-201ENST00000377575 RAB24Q969Q5 203 aa11.79□□□□□ -0.52
HMGN4-201ENST00000377575 SH3BGRL3Q9H299 93 aa11.79□□□□□ -0.52
HMGN4-201ENST00000377575 TRGV1A0A0A0MS02 117 aa11.78□□□□□ -0.52
HMGN4-201ENST00000377575 M0R2N4 97 aa11.78□□□□□ -0.52
HMGN4-201ENST00000377575 ZNF415Q09FC8 603 aa11.78□□□□□ -0.52
HMGN4-201ENST00000377575 Q6AWC8 147 aa11.78□□□□□ -0.52
HMGN4-201ENST00000377575 RPL7L1Q6DKI1 246 aaKnown RBP11.78□□□□□ -0.52
HMGN4-201ENST00000377575 LINC00336Q6ZUF6 198 aa11.78□□□□□ -0.52
HMGN4-201ENST00000377575 GOLT1AQ6ZVE7 132 aa11.78□□□□□ -0.52
HMGN4-201ENST00000377575 ST6GAL2Q96JF0 529 aa11.78□□□□□ -0.52
HMGN4-201ENST00000377575 C18orf15Q96N68 181 aa11.78□□□□□ -0.52
HMGN4-201ENST00000377575 ACTR3CQ9C0K3 210 aaPredicted RBP11.78□□□□□ -0.52
HMGN4-201ENST00000377575 TMPRSS5Q9H3S3 457 aa11.78□□□□□ -0.52
HMGN4-201ENST00000377575 HECTD4Q9Y4D8 3996 aa11.77□□□□□ -0.52
HMGN4-201ENST00000377575 IGLV2-18A0A075B6J9 118 aa11.77□□□□□ -0.53
HMGN4-201ENST00000377575 TRAV26-1A0A087WT03 109 aa11.77□□□□□ -0.53
HMGN4-201ENST00000377575 SERTM2A0A1B0GWG4 89 aa11.77□□□□□ -0.53
HMGN4-201ENST00000377575 SPINK4O60575 86 aa11.77□□□□□ -0.53
HMGN4-201ENST00000377575 CXorf1O96002 111 aa11.77□□□□□ -0.53
HMGN4-201ENST00000377575 GCHFRP30047 84 aa11.77□□□□□ -0.53
HMGN4-201ENST00000377575 CCL18P55774 89 aa11.77□□□□□ -0.53
HMGN4-201ENST00000377575 TMEM167BQ9NRX6 74 aa11.77□□□□□ -0.53
HMGN4-201ENST00000377575 TP53TG3Q9ULZ0 132 aa11.77□□□□□ -0.53
HMGN4-201ENST00000377575 KLF12Q9Y4X4 402 aa11.77□□□□□ -0.53
HMGN4-201ENST00000377575 HOXA5P20719 270 aa11.76□□□□□ -0.53
HMGN4-201ENST00000377575 Q6ZQT7 251 aa11.76□□□□□ -0.53
HMGN4-201ENST00000377575 C5orf17Q8NAS9 161 aa11.76□□□□□ -0.53
HMGN4-201ENST00000377575 TRGV11A0A075B6L2 103 aa11.75□□□□□ -0.53
HMGN4-201ENST00000377575 A0A0J9YY99 117 aa11.75□□□□□ -0.53
HMGN4-201ENST00000377575 H3BNG1 76 aa11.75□□□□□ -0.53
HMGN4-201ENST00000377575 K7EQM0 130 aa11.75□□□□□ -0.53
HMGN4-201ENST00000377575 TAAR5O14804 337 aa11.75□□□□□ -0.53
HMGN4-201ENST00000377575 GNG5P63218 68 aa11.75□□□□□ -0.53
HMGN4-201ENST00000377575 MUC21Q5SSG8 566 aa11.75□□□□□ -0.53
HMGN4-201ENST00000377575 FAM159AQ6UWV7 190 aa11.75□□□□□ -0.53
HMGN4-201ENST00000377575 SUN5Q8TC36 379 aa11.75□□□□□ -0.53
HMGN4-201ENST00000377575 NDFIP1Q9BT67 221 aa11.75□□□□□ -0.53
HMGN4-201ENST00000377575 MUC4Q99102 2169 aa11.75□□□□□ -0.53
HMGN4-201ENST00000377575 G3V3Q6 166 aa11.74□□□□□ -0.53
HMGN4-201ENST00000377575 ARPC5O15511 151 aa11.74□□□□□ -0.53
HMGN4-201ENST00000377575 Q6ZR54 194 aa11.74□□□□□ -0.53
HMGN4-201ENST00000377575 IQCF2Q8IXL9 164 aa11.74□□□□□ -0.53
HMGN4-201ENST00000377575 TRAV8-1A0A0A6YYK1 113 aa11.73□□□□□ -0.53
HMGN4-201ENST00000377575 TRAV21A0A0B4J279 112 aa11.73□□□□□ -0.53
HMGN4-201ENST00000377575 CTXND1A0A1B0GTU2 59 aa11.73□□□□□ -0.53
HMGN4-201ENST00000377575 SOHLH1Q5JUK2 328 aa11.73□□□□□ -0.53
HMGN4-201ENST00000377575 AKR1C8PQ5T2L2 129 aa11.73□□□□□ -0.53
HMGN4-201ENST00000377575 TREM1Q9NP99 234 aa11.73□□□□□ -0.53
HMGN4-201ENST00000377575 MRPL16Q9NX20 251 aaKnown RBP11.73□□□□□ -0.53
HMGN4-201ENST00000377575 NAGKQ9UJ70 344 aa11.73□□□□□ -0.53
HMGN4-201ENST00000377575 DNAH2Q9P225 4427 aa11.72□□□□□ -0.53
HMGN4-201ENST00000377575 F6UZH7 168 aa11.72□□□□□ -0.53
HMGN4-201ENST00000377575 TCRAP04437 139 aa11.72□□□□□ -0.53
HMGN4-201ENST00000377575 TMEM183BQ1AE95 376 aa11.72□□□□□ -0.53
HMGN4-201ENST00000377575 TDRG1Q3Y452 100 aa11.72□□□□□ -0.53
HMGN4-201ENST00000377575 SSX7Q7RTT5 188 aa11.72□□□□□ -0.53
HMGN4-201ENST00000377575 TMEM183AQ8IXX5 376 aa11.72□□□□□ -0.53
HMGN4-201ENST00000377575 LINC00588Q9Y4M8 146 aa11.72□□□□□ -0.53
HMGN4-201ENST00000377575 GGTLC3B5MD39 225 aa11.71□□□□□ -0.53
HMGN4-201ENST00000377575 ZNRF2Q8NHG8 242 aa11.71□□□□□ -0.53
HMGN4-201ENST00000377575 SPXQ9BT56 116 aa11.71□□□□□ -0.53
HMGN4-201ENST00000377575 A0A1W2PRE2 83 aa11.7□□□□□ -0.54
HMGN4-201ENST00000377575 FBLL1A6NHQ2 334 aaKnown RBP11.7□□□□□ -0.54
HMGN4-201ENST00000377575 PRSS29PA6NIE9 313 aa11.7□□□□□ -0.54
HMGN4-201ENST00000377575 RTL8CO15255 209 aa11.7□□□□□ -0.54
HMGN4-201ENST00000377575 SUMO1P63165 101 aaKnown RBP11.7□□□□□ -0.54
HMGN4-201ENST00000377575 ZNF345Q14585 488 aa11.7□□□□□ -0.54
HMGN4-201ENST00000377575 ZFP69Q49AA0 526 aa11.7□□□□□ -0.54
HMGN4-201ENST00000377575 CYB561D1Q8N8Q1 229 aa11.7□□□□□ -0.54
HMGN4-201ENST00000377575 MDFICQ9P1T7 246 aa11.7□□□□□ -0.54
HMGN4-201ENST00000377575 SMLR1H3BR10 107 aa11.69□□□□□ -0.54
HMGN4-201ENST00000377575 IGHV3-53P01767 116 aa11.69□□□□□ -0.54
HMGN4-201ENST00000377575 SLAQ13239 276 aa11.69□□□□□ -0.54
HMGN4-201ENST00000377575 ZNF726P1Q15940 193 aa11.69□□□□□ -0.54
HMGN4-201ENST00000377575 C1orf134Q5TEV5 83 aa11.69□□□□□ -0.54
HMGN4-201ENST00000377575 TMEM75Q8N9X5 138 aa11.69□□□□□ -0.54
HMGN4-201ENST00000377575 TVP23CQ96ET8 276 aa11.69□□□□□ -0.54
HMGN4-201ENST00000377575 KCNS1Q96KK3 526 aa11.69□□□□□ -0.54
HMGN4-201ENST00000377575 SGK494Q96LW2 274 aa11.69□□□□□ -0.54
HMGN4-201ENST00000377575 SDF2L1Q9HCN8 221 aa11.69□□□□□ -0.54
HMGN4-201ENST00000377575 EPDR1Q9UM22 224 aa11.69□□□□□ -0.54
HMGN4-201ENST00000377575 FAT2Q9NYQ8 4349 aa11.69□□□□□ -0.54
HMGN4-201ENST00000377575 NBDYA0A0U1RRE5 68 aa11.68□□□□□ -0.54
HMGN4-201ENST00000377575 FLI1Q01543 452 aaPredicted RBP11.68□□□□□ -0.54
HMGN4-201ENST00000377575 VSIG2Q96IQ7 327 aa11.68□□□□□ -0.54
HMGN4-201ENST00000377575 CYTL1Q9NRR1 136 aa11.68□□□□□ -0.54
HMGN4-201ENST00000377575 PSG8Q9UQ74 426 aa11.68□□□□□ -0.54
HMGN4-201ENST00000377575 PAX4O43316 350 aa11.67□□□□□ -0.54
HMGN4-201ENST00000377575 KCNRGQ8N5I3 272 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms