RNA–Protein interactions for RNA: ENST00000376757.9

SSH3-203, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-203ENST00000376757 CHAC1Q9BUX1 264 aa12.21□□□□□ -0.45
SSH3-203ENST00000376757 TRBV6-1A0A0K0K1D8 114 aa12.21□□□□□ -0.45
SSH3-203ENST00000376757 TEX48A0A1B0GUV7 120 aa12.21□□□□□ -0.45
SSH3-203ENST00000376757 LINC01548A6NM66 108 aa12.21□□□□□ -0.45
SSH3-203ENST00000376757 FABP2P12104 132 aa12.21□□□□□ -0.45
SSH3-203ENST00000376757 GATD1Q8NB37 220 aa12.21□□□□□ -0.45
SSH3-203ENST00000376757 MRPL35Q9NZE8 188 aaKnown RBP12.21□□□□□ -0.45
SSH3-203ENST00000376757 HHLA3Q9XRX5 114 aa12.21□□□□□ -0.45
SSH3-203ENST00000376757 G3V318 75 aa12.21□□□□□ -0.46
SSH3-203ENST00000376757 IGLC6P0CF74 106 aa12.21□□□□□ -0.46
SSH3-203ENST00000376757 C15orf32Q32M92 178 aa12.21□□□□□ -0.46
SSH3-203ENST00000376757 MAPKAPK5-AS1Q8N8E1 139 aa12.21□□□□□ -0.46
SSH3-203ENST00000376757 IGKV3-7A0A075B6H7 116 aa12.2□□□□□ -0.46
SSH3-203ENST00000376757 OR9G4Q8NGQ1 327 aa12.2□□□□□ -0.46
SSH3-203ENST00000376757 RAB1BQ9H0U4 201 aa12.2□□□□□ -0.46
SSH3-203ENST00000376757 TRBV25-1A0A075B6N4 114 aa12.2□□□□□ -0.46
SSH3-203ENST00000376757 SMIM13P0DJ93 91 aa12.2□□□□□ -0.46
SSH3-203ENST00000376757 NPFFR1Q9GZQ6 430 aa12.2□□□□□ -0.46
SSH3-203ENST00000376757 IGKV3D-20A0A0C4DH25 116 aa12.19□□□□□ -0.46
SSH3-203ENST00000376757 IGF1P05019 195 aa12.19□□□□□ -0.46
SSH3-203ENST00000376757 PAX2Q02962 417 aa12.19□□□□□ -0.46
SSH3-203ENST00000376757 PDE6HQ13956 83 aa12.19□□□□□ -0.46
SSH3-203ENST00000376757 CLEC19AQ6UXS0 136 aa12.19□□□□□ -0.46
SSH3-203ENST00000376757 FABP5P3A8MUU1 101 aa12.19□□□□□ -0.46
SSH3-203ENST00000376757 IGKCP01834 107 aa12.19□□□□□ -0.46
SSH3-203ENST00000376757 BMI1P35226 326 aa12.19□□□□□ -0.46
SSH3-203ENST00000376757 G3V4G9 280 aa12.18□□□□□ -0.46
SSH3-203ENST00000376757 OR4X2Q8NGF9 303 aa12.18□□□□□ -0.46
SSH3-203ENST00000376757 TMEM238C9JI98 176 aa12.18□□□□□ -0.46
SSH3-203ENST00000376757 SMIM17P0DL12 118 aa12.18□□□□□ -0.46
SSH3-203ENST00000376757 GTSF1LQ9H1H1 148 aa12.18□□□□□ -0.46
SSH3-203ENST00000376757 NOTCH3Q9UM47 2321 aa12.18□□□□□ -0.46
SSH3-203ENST00000376757 RPS20P60866 119 aaKnown RBP12.18□□□□□ -0.46
SSH3-203ENST00000376757 VMO1Q7Z5L0 202 aa12.17□□□□□ -0.46
SSH3-203ENST00000376757 COL25A1Q9BXS0 654 aaPredicted RBP12.17□□□□□ -0.46
SSH3-203ENST00000376757 IGHV3OR16-10A0A075B7F0 116 aa12.17□□□□□ -0.46
SSH3-203ENST00000376757 SH2D6Q7Z4S9 175 aa12.17□□□□□ -0.46
SSH3-203ENST00000376757 AGPAT4-IT1Q9H0P7 198 aa12.17□□□□□ -0.46
SSH3-203ENST00000376757 IGHV7-81A0A0B4J1V7 117 aa12.16□□□□□ -0.46
SSH3-203ENST00000376757 H3BVH4 76 aa12.16□□□□□ -0.46
SSH3-203ENST00000376757 CCL21O00585 134 aa12.16□□□□□ -0.46
SSH3-203ENST00000376757 WFDC2Q14508 124 aa12.16□□□□□ -0.46
SSH3-203ENST00000376757 H3BMG7 143 aa12.16□□□□□ -0.46
SSH3-203ENST00000376757 ZFP36P26651 326 aaKnown RBP12.15□□□□□ -0.46
SSH3-203ENST00000376757 CEACAM3P40198 252 aa12.15□□□□□ -0.46
SSH3-203ENST00000376757 M0R381 172 aa12.15□□□□□ -0.46
SSH3-203ENST00000376757 SPANXN1Q5VSR9 72 aa12.15□□□□□ -0.46
SSH3-203ENST00000376757 NPBQ8NG41 125 aa12.15□□□□□ -0.47
SSH3-203ENST00000376757 HIF1ANQ9NWT6 349 aa12.15□□□□□ -0.47
SSH3-203ENST00000376757 DPM2O94777 84 aa12.14□□□□□ -0.47
SSH3-203ENST00000376757 SMAGPQ0VAQ4 97 aa12.14□□□□□ -0.47
SSH3-203ENST00000376757 NEGR1Q7Z3B1 354 aa12.14□□□□□ -0.47
SSH3-203ENST00000376757 ATP6V0E1O15342 81 aa12.14□□□□□ -0.47
SSH3-203ENST00000376757 EMP1P54849 157 aa12.14□□□□□ -0.47
SSH3-203ENST00000376757 TMEM219Q86XT9 240 aa12.14□□□□□ -0.47
SSH3-203ENST00000376757 GLMPQ8WWB7 406 aa12.14□□□□□ -0.47
SSH3-203ENST00000376757 DPF1Q92782 380 aa12.14□□□□□ -0.47
SSH3-203ENST00000376757 RNF5Q99942 180 aa12.14□□□□□ -0.47
SSH3-203ENST00000376757 UTP20O75691 2785 aaKnown RBP12.14□□□□□ -0.47
SSH3-203ENST00000376757 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.13□□□□□ -0.47
SSH3-203ENST00000376757 OR11H6Q8NGC7 330 aa12.13□□□□□ -0.47
SSH3-203ENST00000376757 USP9YO00507 2555 aaPredicted RBP12.13□□□□□ -0.47
SSH3-203ENST00000376757 ETDBQ3ZM63 59 aa12.13□□□□□ -0.47
SSH3-203ENST00000376757 TTC9CQ8N5M4 171 aa12.13□□□□□ -0.47
SSH3-203ENST00000376757 WFDC12Q8WWY7 111 aa12.13□□□□□ -0.47
SSH3-203ENST00000376757 BUB3O43684 328 aa12.12□□□□□ -0.47
SSH3-203ENST00000376757 PRR9Q5T870 116 aa12.12□□□□□ -0.47
SSH3-203ENST00000376757 HIST1H4GQ99525 98 aa12.12□□□□□ -0.47
SSH3-203ENST00000376757 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.12□□□□□ -0.47
SSH3-203ENST00000376757 ZANQ9Y493 2812 aa12.12□□□□□ -0.47
SSH3-203ENST00000376757 LY6G5BQ8NDX9 201 aa12.12□□□□□ -0.47
SSH3-203ENST00000376757 NXT2Q9NPJ8 142 aaKnown RBP12.12□□□□□ -0.47
SSH3-203ENST00000376757 INSL3P51460 131 aa12.11□□□□□ -0.47
SSH3-203ENST00000376757 FOXC1Q12948 553 aa12.11□□□□□ -0.47
SSH3-203ENST00000376757 S100A7AQ86SG5 101 aa12.11□□□□□ -0.47
SSH3-203ENST00000376757 MYOZ3Q8TDC0 251 aa12.11□□□□□ -0.47
SSH3-203ENST00000376757 SRSF8Q9BRL6 282 aaKnown RBP12.11□□□□□ -0.47
SSH3-203ENST00000376757 CYSLTR1Q9Y271 337 aa12.11□□□□□ -0.47
SSH3-203ENST00000376757 SIVA1O15304 175 aa12.11□□□□□ -0.47
SSH3-203ENST00000376757 PRTN3P24158 256 aa12.11□□□□□ -0.47
SSH3-203ENST00000376757 TMEM78Q5T7P6 136 aa12.11□□□□□ -0.47
SSH3-203ENST00000376757 CEND1Q8N111 149 aa12.11□□□□□ -0.47
SSH3-203ENST00000376757 RPL39LQ96EH5 51 aaKnown RBP12.11□□□□□ -0.47
SSH3-203ENST00000376757 TIMD4Q96H15 378 aa12.11□□□□□ -0.47
SSH3-203ENST00000376757 Q8N9W7 124 aa12.1□□□□□ -0.47
SSH3-203ENST00000376757 POLQO75417 2590 aa12.1□□□□□ -0.47
SSH3-203ENST00000376757 MSRB2Q9Y3D2 182 aa12.1□□□□□ -0.47
SSH3-203ENST00000376757 TSSC4Q9Y5U2 329 aaPredicted RBP12.1□□□□□ -0.47
SSH3-203ENST00000376757 CLPSL1A2RUU4 121 aa12.09□□□□□ -0.47
SSH3-203ENST00000376757 ODF3BA8MYP8 253 aa12.09□□□□□ -0.47
SSH3-203ENST00000376757 F6UB75 175 aa12.09□□□□□ -0.47
SSH3-203ENST00000376757 RPL11P62913 178 aaKnown RBP12.09□□□□□ -0.47
SSH3-203ENST00000376757 LAGE3Q14657 143 aa12.09□□□□□ -0.47
SSH3-203ENST00000376757 Q8N8P6 123 aa12.09□□□□□ -0.47
SSH3-203ENST00000376757 OR5A1Q8NGJ0 315 aa12.09□□□□□ -0.47
SSH3-203ENST00000376757 PHLDA1Q8WV24 401 aaPredicted RBP12.09□□□□□ -0.47
SSH3-203ENST00000376757 ZNF479Q96JC4 524 aa12.09□□□□□ -0.47
SSH3-203ENST00000376757 CCDC140Q96MF4 163 aa12.09□□□□□ -0.47
SSH3-203ENST00000376757 IGLV2-18A0A075B6J9 118 aa12.09□□□□□ -0.47
SSH3-203ENST00000376757 TRAV8-2A0A0B4J237 113 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms