RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 CRYGCP07315 174 aa11.26□□□□□ -0.61
TNFRSF1B-201ENST00000376259 COX8AP10176 69 aa11.26□□□□□ -0.61
TNFRSF1B-201ENST00000376259 SAA4P35542 130 aa11.26□□□□□ -0.61
TNFRSF1B-201ENST00000376259 ATP5G2Q06055 141 aa11.26□□□□□ -0.61
TNFRSF1B-201ENST00000376259 ZNF562Q6V9R5 426 aa11.26□□□□□ -0.61
TNFRSF1B-201ENST00000376259 BPESC1Q9GZL8 116 aa11.25□□□□□ -0.61
TNFRSF1B-201ENST00000376259 F6UB75 175 aa11.25□□□□□ -0.61
TNFRSF1B-201ENST00000376259 CD5LO43866 347 aa11.25□□□□□ -0.61
TNFRSF1B-201ENST00000376259 MTORP42345 2549 aa11.25□□□□□ -0.61
TNFRSF1B-201ENST00000376259 FOXE3Q13461 319 aa11.25□□□□□ -0.61
TNFRSF1B-201ENST00000376259 AMTNQ6UX39 209 aa11.25□□□□□ -0.61
TNFRSF1B-201ENST00000376259 MRPL52Q86TS9 123 aaKnown RBP11.25□□□□□ -0.61
TNFRSF1B-201ENST00000376259 SCGB3A1Q96QR1 104 aa11.25□□□□□ -0.61
TNFRSF1B-201ENST00000376259 KAAG1Q9UBP8 84 aa11.25□□□□□ -0.61
TNFRSF1B-201ENST00000376259 CYSLTR1Q9Y271 337 aa11.25□□□□□ -0.61
TNFRSF1B-201ENST00000376259 IGHV2-70DA0A0C4DH43 119 aa11.24□□□□□ -0.61
TNFRSF1B-201ENST00000376259 LINC01548A6NM66 108 aa11.24□□□□□ -0.61
TNFRSF1B-201ENST00000376259 SMAD7O15105 426 aaKnown RBP11.24□□□□□ -0.61
TNFRSF1B-201ENST00000376259 RPS20P60866 119 aaKnown RBP11.24□□□□□ -0.61
TNFRSF1B-201ENST00000376259 OR10J6PQ8NGY7 276 aa11.24□□□□□ -0.61
TNFRSF1B-201ENST00000376259 IGHV3-64A0A075B6Q5 118 aa11.24□□□□□ -0.61
TNFRSF1B-201ENST00000376259 ZNF256Q9Y2P7 627 aaPredicted RBP11.24□□□□□ -0.61
TNFRSF1B-201ENST00000376259 TMEM8BA6NDV4 472 aa11.24□□□□□ -0.61
TNFRSF1B-201ENST00000376259 IGKCP01834 107 aa11.24□□□□□ -0.61
TNFRSF1B-201ENST00000376259 CD300EQ496F6 205 aaPredicted RBP11.24□□□□□ -0.61
TNFRSF1B-201ENST00000376259 TNRC6BQ9UPQ9 1833 aaKnown RBP11.24□□□□□ -0.61
TNFRSF1B-201ENST00000376259 OR11H12B2RN74 326 aa11.23□□□□□ -0.61
TNFRSF1B-201ENST00000376259 PRTN3P24158 256 aa11.23□□□□□ -0.61
TNFRSF1B-201ENST00000376259 MYCNOSP40205 109 aa11.23□□□□□ -0.61
TNFRSF1B-201ENST00000376259 Q1RN00 199 aa11.23□□□□□ -0.61
TNFRSF1B-201ENST00000376259 SAMD5Q5TGI4 173 aa11.23□□□□□ -0.61
TNFRSF1B-201ENST00000376259 OR11H1Q8NG94 326 aa11.23□□□□□ -0.61
TNFRSF1B-201ENST00000376259 OR11H2Q8NH07 326 aa11.23□□□□□ -0.61
TNFRSF1B-201ENST00000376259 SCRT2Q9NQ03 307 aa11.23□□□□□ -0.61
TNFRSF1B-201ENST00000376259 DEFB125Q8N687 156 aa11.23□□□□□ -0.61
TNFRSF1B-201ENST00000376259 ZNF418Q8TF45 676 aaPredicted RBP11.23□□□□□ -0.61
TNFRSF1B-201ENST00000376259 EEF1AKMT3Q96AZ1 226 aa11.23□□□□□ -0.61
TNFRSF1B-201ENST00000376259 Q6ZQT7 251 aa11.23□□□□□ -0.61
TNFRSF1B-201ENST00000376259 FANCD2OSQ96PS1 177 aa11.23□□□□□ -0.61
TNFRSF1B-201ENST00000376259 LINC00574Q9H8X3 128 aa11.23□□□□□ -0.61
TNFRSF1B-201ENST00000376259 DTX2Q86UW9 622 aa11.22□□□□□ -0.61
TNFRSF1B-201ENST00000376259 CFHR4Q92496 578 aa11.22□□□□□ -0.61
TNFRSF1B-201ENST00000376259 MRPL35Q9NZE8 188 aaKnown RBP11.22□□□□□ -0.61
TNFRSF1B-201ENST00000376259 TMEM14CQ9P0S9 112 aa11.22□□□□□ -0.61
TNFRSF1B-201ENST00000376259 IGLV2-11P01706 119 aa11.22□□□□□ -0.61
TNFRSF1B-201ENST00000376259 CDSNQ15517 529 aa11.22□□□□□ -0.61
TNFRSF1B-201ENST00000376259 TMEM170BQ5T4T1 132 aa11.22□□□□□ -0.61
TNFRSF1B-201ENST00000376259 FN1P02751 2386 aaKnown RBP11.22□□□□□ -0.61
TNFRSF1B-201ENST00000376259 CSMD1Q96PZ7 3565 aa11.22□□□□□ -0.61
TNFRSF1B-201ENST00000376259 A0A1B0GW15 77 aa11.22□□□□□ -0.61
TNFRSF1B-201ENST00000376259 DPM2O94777 84 aa11.22□□□□□ -0.61
TNFRSF1B-201ENST00000376259 CTSGP08311 255 aa11.22□□□□□ -0.61
TNFRSF1B-201ENST00000376259 HSD52Q0P140 79 aa11.22□□□□□ -0.61
TNFRSF1B-201ENST00000376259 SMAGPQ0VAQ4 97 aa11.21□□□□□ -0.61
TNFRSF1B-201ENST00000376259 C7orf69Q9H7B7 122 aa11.21□□□□□ -0.61
TNFRSF1B-201ENST00000376259 HIVEP2P31629 2446 aa11.21□□□□□ -0.61
TNFRSF1B-201ENST00000376259 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.21□□□□□ -0.61
TNFRSF1B-201ENST00000376259 SEC11AP67812 179 aa11.21□□□□□ -0.61
TNFRSF1B-201ENST00000376259 SMIM12Q96EX1 92 aa11.21□□□□□ -0.61
TNFRSF1B-201ENST00000376259 AGPAT4-IT1Q9H0P7 198 aa11.21□□□□□ -0.61
TNFRSF1B-201ENST00000376259 GTSF1LQ9H1H1 148 aa11.21□□□□□ -0.61
TNFRSF1B-201ENST00000376259 LINC01545Q5VT33 79 aa11.21□□□□□ -0.62
TNFRSF1B-201ENST00000376259 C3orf36Q3SXR2 165 aa11.2□□□□□ -0.62
TNFRSF1B-201ENST00000376259 DUX5Q96PT3 197 aa11.2□□□□□ -0.62
TNFRSF1B-201ENST00000376259 JMJD1CQ15652 2540 aa11.2□□□□□ -0.62
TNFRSF1B-201ENST00000376259 A0A087WWL8 130 aa11.2□□□□□ -0.62
TNFRSF1B-201ENST00000376259 ZFP36P26651 326 aaKnown RBP11.2□□□□□ -0.62
TNFRSF1B-201ENST00000376259 LYPD1Q8N2G4 141 aa11.2□□□□□ -0.62
TNFRSF1B-201ENST00000376259 TTC9CQ8N5M4 171 aa11.2□□□□□ -0.62
TNFRSF1B-201ENST00000376259 CHAC1Q9BUX1 264 aa11.2□□□□□ -0.62
TNFRSF1B-201ENST00000376259 BEX4Q9NWD9 120 aaPredicted RBP11.2□□□□□ -0.62
TNFRSF1B-201ENST00000376259 OR1N2Q8NGR9 330 aa11.2□□□□□ -0.62
TNFRSF1B-201ENST00000376259 LINC00477Q96M19 166 aa11.2□□□□□ -0.62
TNFRSF1B-201ENST00000376259 MAPK1IP1LQ8NDC0 245 aa11.19□□□□□ -0.62
TNFRSF1B-201ENST00000376259 NXT2Q9NPJ8 142 aaKnown RBP11.19□□□□□ -0.62
TNFRSF1B-201ENST00000376259 PAX8Q06710 450 aa11.19□□□□□ -0.62
TNFRSF1B-201ENST00000376259 TCF15Q12870 199 aa11.19□□□□□ -0.62
TNFRSF1B-201ENST00000376259 AGRNO00468 2067 aa11.18□□□□□ -0.62
TNFRSF1B-201ENST00000376259 IGHV7-81A0A0B4J1V7 117 aa11.18□□□□□ -0.62
TNFRSF1B-201ENST00000376259 A0A1B0GWB2 263 aa11.18□□□□□ -0.62
TNFRSF1B-201ENST00000376259 FSTL3O95633 263 aa11.18□□□□□ -0.62
TNFRSF1B-201ENST00000376259 MRPL16Q9NX20 251 aaKnown RBP11.18□□□□□ -0.62
TNFRSF1B-201ENST00000376259 IGF1P05019 195 aa11.18□□□□□ -0.62
TNFRSF1B-201ENST00000376259 PSMB2P49721 201 aa11.18□□□□□ -0.62
TNFRSF1B-201ENST00000376259 FXYD2P54710 66 aa11.18□□□□□ -0.62
TNFRSF1B-201ENST00000376259 J3QR89 54 aa11.17□□□□□ -0.62
TNFRSF1B-201ENST00000376259 PRSS2P07478 247 aa11.17□□□□□ -0.62
TNFRSF1B-201ENST00000376259 ZNF56Q15929 161 aa11.17□□□□□ -0.62
TNFRSF1B-201ENST00000376259 ZNF479Q96JC4 524 aa11.17□□□□□ -0.62
TNFRSF1B-201ENST00000376259 PKD1L2Q7Z442 2459 aa11.17□□□□□ -0.62
TNFRSF1B-201ENST00000376259 IGLV11-55A0A075B6I3 123 aa11.17□□□□□ -0.62
TNFRSF1B-201ENST00000376259 PDE6HQ13956 83 aa11.17□□□□□ -0.62
TNFRSF1B-201ENST00000376259 C8orf86Q6ZUL3 223 aa11.17□□□□□ -0.62
TNFRSF1B-201ENST00000376259 OR4X2Q8NGF9 303 aa11.17□□□□□ -0.62
TNFRSF1B-201ENST00000376259 IGHV3-73A0A0B4J1V6 119 aa11.17□□□□□ -0.62
TNFRSF1B-201ENST00000376259 ATP5LO75964 103 aa11.17□□□□□ -0.62
TNFRSF1B-201ENST00000376259 CD7P09564 240 aa11.17□□□□□ -0.62
TNFRSF1B-201ENST00000376259 INS-IGF2F8WCM5 200 aa11.16□□□□□ -0.62
TNFRSF1B-201ENST00000376259 ZNF688P0C7X2 276 aa11.16□□□□□ -0.62
TNFRSF1B-201ENST00000376259 LAGE3Q14657 143 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms