RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 OTORQ9NRC9 128 aa9.56□□□□□ -0.88
C9orf3-203ENST00000375315 H3BTX0 84 aa9.56□□□□□ -0.88
C9orf3-203ENST00000375315 CKS2P33552 79 aa9.56□□□□□ -0.88
C9orf3-203ENST00000375315 SMCPP49901 116 aaPredicted RBP9.56□□□□□ -0.88
C9orf3-203ENST00000375315 ITLN2Q8WWU7 325 aaPredicted RBP9.56□□□□□ -0.88
C9orf3-203ENST00000375315 TANC2Q9HCD6 1990 aa9.56□□□□□ -0.88
C9orf3-203ENST00000375315 ATP5LO75964 103 aa9.56□□□□□ -0.88
C9orf3-203ENST00000375315 SUB1P53999 127 aaKnown RBP eCLIP9.56□□□□□ -0.88
C9orf3-203ENST00000375315 HARBI1Q96MB7 349 aa9.56□□□□□ -0.88
C9orf3-203ENST00000375315 CALYQ9NYX4 217 aa9.56□□□□□ -0.88
C9orf3-203ENST00000375315 TNFRSF18Q9Y5U5 241 aa9.56□□□□□ -0.88
C9orf3-203ENST00000375315 CSPG4Q6UVK1 2322 aa9.55□□□□□ -0.88
C9orf3-203ENST00000375315 IGKV1D-37A0A075B6S9 117 aa9.55□□□□□ -0.88
C9orf3-203ENST00000375315 HOXA3O43365 443 aaPredicted RBP9.55□□□□□ -0.88
C9orf3-203ENST00000375315 MRPL51Q4U2R6 128 aaKnown RBP9.55□□□□□ -0.88
C9orf3-203ENST00000375315 TEN1Q86WV5 123 aa9.55□□□□□ -0.88
C9orf3-203ENST00000375315 TMEM158Q8WZ71 300 aa9.55□□□□□ -0.88
C9orf3-203ENST00000375315 FASNP49327 2511 aaKnown RBP9.55□□□□□ -0.88
C9orf3-203ENST00000375315 ZNF688P0C7X2 276 aa9.55□□□□□ -0.88
C9orf3-203ENST00000375315 LYRM7Q5U5X0 104 aa9.55□□□□□ -0.88
C9orf3-203ENST00000375315 CELSR2Q9HCU4 2923 aa9.55□□□□□ -0.88
C9orf3-203ENST00000375315 TRBV6-1A0A0K0K1D8 114 aa9.54□□□□□ -0.88
C9orf3-203ENST00000375315 RBP4P02753 201 aa9.54□□□□□ -0.88
C9orf3-203ENST00000375315 GP9P14770 177 aa9.54□□□□□ -0.88
C9orf3-203ENST00000375315 IGFBPL1Q8WX77 278 aa9.54□□□□□ -0.88
C9orf3-203ENST00000375315 GAFA1Q96PS6 74 aa9.54□□□□□ -0.88
C9orf3-203ENST00000375315 FOXC2Q99958 501 aa9.54□□□□□ -0.88
C9orf3-203ENST00000375315 HIF1ANQ9NWT6 349 aa9.54□□□□□ -0.88
C9orf3-203ENST00000375315 LHBP01229 141 aa9.54□□□□□ -0.88
C9orf3-203ENST00000375315 NPYP01303 97 aa9.54□□□□□ -0.88
C9orf3-203ENST00000375315 IGHV3-48P01763 117 aa9.54□□□□□ -0.88
C9orf3-203ENST00000375315 ZNF672Q499Z4 452 aaPredicted RBP9.54□□□□□ -0.88
C9orf3-203ENST00000375315 SPANXA1Q9NS26 97 aa9.54□□□□□ -0.88
C9orf3-203ENST00000375315 TLN2Q9Y4G6 2542 aa9.54□□□□□ -0.88
C9orf3-203ENST00000375315 TMEM213A2RRL7 107 aa9.53□□□□□ -0.88
C9orf3-203ENST00000375315 B9A039 149 aa9.53□□□□□ -0.88
C9orf3-203ENST00000375315 TMEM178BH3BS89 294 aa9.53□□□□□ -0.88
C9orf3-203ENST00000375315 IGLV2-11P01706 119 aa9.53□□□□□ -0.88
C9orf3-203ENST00000375315 NHLRC4P0CG21 123 aaPredicted RBP9.53□□□□□ -0.88
C9orf3-203ENST00000375315 SAA1P0DJI8 122 aaPredicted RBP9.53□□□□□ -0.88
C9orf3-203ENST00000375315 PSMB2P49721 201 aa9.53□□□□□ -0.88
C9orf3-203ENST00000375315 MAP1LC3AQ9H492 121 aa9.53□□□□□ -0.88
C9orf3-203ENST00000375315 NDUFA4L2Q9NRX3 87 aa9.53□□□□□ -0.88
C9orf3-203ENST00000375315 TMEM8BA6NDV4 472 aa9.53□□□□□ -0.88
C9orf3-203ENST00000375315 SRD5A1P18405 259 aa9.53□□□□□ -0.88
C9orf3-203ENST00000375315 LEPP41159 167 aa9.53□□□□□ -0.88
C9orf3-203ENST00000375315 GAGE2BQ13066 116 aa9.53□□□□□ -0.88
C9orf3-203ENST00000375315 C3orf36Q3SXR2 165 aa9.53□□□□□ -0.88
C9orf3-203ENST00000375315 GAGE2EQ4V326 116 aa9.53□□□□□ -0.88
C9orf3-203ENST00000375315 NRGNQ92686 78 aa9.53□□□□□ -0.88
C9orf3-203ENST00000375315 TMEM133Q9H2Q1 129 aa9.53□□□□□ -0.88
C9orf3-203ENST00000375315 TMEM160Q9NX00 188 aa9.53□□□□□ -0.88
C9orf3-203ENST00000375315 GAGE2DQ9UEU5 116 aa9.53□□□□□ -0.88
C9orf3-203ENST00000375315 TNCP24821 2201 aa9.53□□□□□ -0.88
C9orf3-203ENST00000375315 CELSR1Q9NYQ6 3014 aa9.53□□□□□ -0.88
C9orf3-203ENST00000375315 NCBP2LA6PVI3 153 aaKnown RBP9.53□□□□□ -0.88
C9orf3-203ENST00000375315 MORN3Q6PF18 240 aaPredicted RBP9.53□□□□□ -0.88
C9orf3-203ENST00000375315 LYZL1Q6UWQ5 148 aa9.53□□□□□ -0.88
C9orf3-203ENST00000375315 MAPKAPK5-AS1Q8N8E1 139 aa9.53□□□□□ -0.88
C9orf3-203ENST00000375315 CARD19Q96LW7 228 aa9.53□□□□□ -0.88
C9orf3-203ENST00000375315 PLXNB1O43157 2135 aa9.53□□□□□ -0.88
C9orf3-203ENST00000375315 VPS13CQ709C8 3753 aa9.52□□□□□ -0.88
C9orf3-203ENST00000375315 RAI1Q7Z5J4 1906 aaPredicted RBP9.52□□□□□ -0.88
C9orf3-203ENST00000375315 TRBV7-3A0A075B6L6 115 aa9.52□□□□□ -0.89
C9orf3-203ENST00000375315 FABP5P3A8MUU1 101 aa9.52□□□□□ -0.89
C9orf3-203ENST00000375315 RHODO00212 210 aa9.52□□□□□ -0.89
C9orf3-203ENST00000375315 IGKV1-16P04430 117 aa9.52□□□□□ -0.89
C9orf3-203ENST00000375315 NDUFV3P56181 108 aaKnown RBP9.52□□□□□ -0.89
C9orf3-203ENST00000375315 RPEQ96AT9 228 aa9.52□□□□□ -0.89
C9orf3-203ENST00000375315 CITED1Q99966 193 aa9.52□□□□□ -0.89
C9orf3-203ENST00000375315 SRSF8Q9BRL6 282 aaKnown RBP9.52□□□□□ -0.89
C9orf3-203ENST00000375315 CTSZQ9UBR2 303 aa9.52□□□□□ -0.89
C9orf3-203ENST00000375315 LOC107984156A0A0G2JMH3 177 aa9.52□□□□□ -0.89
C9orf3-203ENST00000375315 INS-IGF2F8WCM5 200 aa9.52□□□□□ -0.89
C9orf3-203ENST00000375315 LINC01619G3V211 115 aa9.52□□□□□ -0.89
C9orf3-203ENST00000375315 TTC32Q5I0X7 151 aa9.52□□□□□ -0.89
C9orf3-203ENST00000375315 ARL17AQ8IVW1 177 aa9.52□□□□□ -0.89
C9orf3-203ENST00000375315 NAV2Q8IVL1 2488 aa9.51□□□□□ -0.89
C9orf3-203ENST00000375315 SMKR1H3BMG3 65 aa9.51□□□□□ -0.89
C9orf3-203ENST00000375315 NDUFB3O43676 98 aa9.51□□□□□ -0.89
C9orf3-203ENST00000375315 PTH2Q96A98 100 aa9.51□□□□□ -0.89
C9orf3-203ENST00000375315 FCN3O75636 299 aa9.51□□□□□ -0.89
C9orf3-203ENST00000375315 BRI3O95415 125 aa9.51□□□□□ -0.89
C9orf3-203ENST00000375315 HOXB4P17483 251 aaPredicted RBP9.51□□□□□ -0.89
C9orf3-203ENST00000375315 GATA4P43694 442 aa9.51□□□□□ -0.89
C9orf3-203ENST00000375315 TMEM75Q8N9X5 138 aa9.51□□□□□ -0.89
C9orf3-203ENST00000375315 TMEM190Q8WZ59 177 aa9.51□□□□□ -0.89
C9orf3-203ENST00000375315 TRAV40A0A0B4J280 105 aa9.51□□□□□ -0.89
C9orf3-203ENST00000375315 ZNF785A8K8V0 405 aa9.51□□□□□ -0.89
C9orf3-203ENST00000375315 A8MWV9 139 aa9.51□□□□□ -0.89
C9orf3-203ENST00000375315 SNCGO76070 127 aa9.51□□□□□ -0.89
C9orf3-203ENST00000375315 EXOC3-AS1Q8N2X6 119 aa9.51□□□□□ -0.89
C9orf3-203ENST00000375315 SLC25A39Q9BZJ4 359 aaPredicted RBP9.51□□□□□ -0.89
C9orf3-203ENST00000375315 NXT2Q9NPJ8 142 aaKnown RBP9.51□□□□□ -0.89
C9orf3-203ENST00000375315 FBXL19-AS1Q494R0 122 aa9.5□□□□□ -0.89
C9orf3-203ENST00000375315 Q71RC1 249 aaPredicted RBP9.5□□□□□ -0.89
C9orf3-203ENST00000375315 TRGV9Q99603 122 aa9.5□□□□□ -0.89
C9orf3-203ENST00000375315 HELZ2Q9BYK8 2649 aaKnown RBP9.5□□□□□ -0.89
C9orf3-203ENST00000375315 CCDC179H3BU77 68 aa9.5□□□□□ -0.89
C9orf3-203ENST00000375315 ANXA2RQ3ZCQ2 193 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms