RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 GNG7O60262 68 aa3.67□□□□□ -1.82
USP48-202ENST00000374730 SPINK4O60575 86 aa3.67□□□□□ -1.82
USP48-202ENST00000374730 ZNF253O75346 499 aa3.67□□□□□ -1.82
USP48-202ENST00000374730 ZNF324O75467 553 aaPredicted RBP3.67□□□□□ -1.82
USP48-202ENST00000374730 IL4P05112 153 aa3.67□□□□□ -1.82
USP48-202ENST00000374730 GPX1P07203 203 aa3.67□□□□□ -1.82
USP48-202ENST00000374730 S100A7P31151 101 aa3.67□□□□□ -1.82
USP48-202ENST00000374730 UBE2E1P51965 193 aa3.67□□□□□ -1.82
USP48-202ENST00000374730 HBBP68871 147 aa3.67□□□□□ -1.82
USP48-202ENST00000374730 SLC35B1P78383 322 aa3.67□□□□□ -1.82
USP48-202ENST00000374730 SLAQ13239 276 aa3.67□□□□□ -1.82
USP48-202ENST00000374730 HES1Q14469 280 aa3.67□□□□□ -1.82
USP48-202ENST00000374730 FAM162BQ5T6X4 162 aa3.67□□□□□ -1.82
USP48-202ENST00000374730 GDF5OSQ5U4N7 250 aa3.67□□□□□ -1.82
USP48-202ENST00000374730 LEMD1Q68G75 181 aa3.67□□□□□ -1.82
USP48-202ENST00000374730 LINC00322Q6ZN03 302 aaPredicted RBP3.67□□□□□ -1.82
USP48-202ENST00000374730 Q75L30 129 aa3.67□□□□□ -1.82
USP48-202ENST00000374730 COX8CQ7Z4L0 72 aa3.67□□□□□ -1.82
USP48-202ENST00000374730 MRPL52Q86TS9 123 aaKnown RBP3.67□□□□□ -1.82
USP48-202ENST00000374730 DYNAPQ8N1N2 210 aa3.67□□□□□ -1.82
USP48-202ENST00000374730 CIARTQ8N365 385 aaPredicted RBP3.67□□□□□ -1.82
USP48-202ENST00000374730 SIGLECL1Q8N7X8 197 aa3.67□□□□□ -1.82
USP48-202ENST00000374730 Q8N9W7 124 aa3.67□□□□□ -1.82
USP48-202ENST00000374730 GATD1Q8NB37 220 aa3.67□□□□□ -1.82
USP48-202ENST00000374730 C18orf32Q8TCD1 76 aa3.67□□□□□ -1.82
USP48-202ENST00000374730 VN1R17PQ8TDU5 208 aa3.67□□□□□ -1.82
USP48-202ENST00000374730 GTSF1Q8WW33 167 aa3.67□□□□□ -1.82
USP48-202ENST00000374730 ITLN2Q8WWU7 325 aaPredicted RBP3.67□□□□□ -1.82
USP48-202ENST00000374730 ZNF414Q96IQ9 312 aa3.67□□□□□ -1.82
USP48-202ENST00000374730 TBX15Q96SF7 602 aa3.67□□□□□ -1.82
USP48-202ENST00000374730 C2orf88Q9BSF0 95 aa3.67□□□□□ -1.82
USP48-202ENST00000374730 FAM103A1Q9BTL3 118 aaKnown RBP3.67□□□□□ -1.82
USP48-202ENST00000374730 SAMD10Q9BYL1 202 aa3.67□□□□□ -1.82
USP48-202ENST00000374730 C21orf62Q9NYP8 219 aa3.67□□□□□ -1.82
USP48-202ENST00000374730 ZFP30Q9Y2G7 519 aa3.67□□□□□ -1.82
USP48-202ENST00000374730 IGHV7-81A0A0B4J1V7 117 aa3.66□□□□□ -1.82
USP48-202ENST00000374730 A0A1B0GW15 77 aa3.66□□□□□ -1.82
USP48-202ENST00000374730 ZNF705FA8MVS1 300 aaPredicted RBP3.66□□□□□ -1.82
USP48-202ENST00000374730 H3BTX0 84 aa3.66□□□□□ -1.82
USP48-202ENST00000374730 APOHP02749 345 aaPredicted RBP3.66□□□□□ -1.82
USP48-202ENST00000374730 SNRPCP09234 159 aaKnown RBP3.66□□□□□ -1.82
USP48-202ENST00000374730 FAM106CPP0CH98 169 aa3.66□□□□□ -1.82
USP48-202ENST00000374730 ZNF705DP0CH99 300 aaPredicted RBP3.66□□□□□ -1.82
USP48-202ENST00000374730 ZNF705BP0CI00 300 aaPredicted RBP3.66□□□□□ -1.82
USP48-202ENST00000374730 RPL7P18124 248 aaKnown RBP3.66□□□□□ -1.82
USP48-202ENST00000374730 CD24P25063 80 aa3.66□□□□□ -1.82
USP48-202ENST00000374730 FOXA3P55318 350 aaPredicted RBP3.66□□□□□ -1.82
USP48-202ENST00000374730 LMO4P61968 165 aa3.66□□□□□ -1.82
USP48-202ENST00000374730 PSG9Q00887 426 aa3.66□□□□□ -1.82
USP48-202ENST00000374730 PSG3Q16557 428 aa3.66□□□□□ -1.82
USP48-202ENST00000374730 KIAA1644Q3SXP7 199 aa3.66□□□□□ -1.82
USP48-202ENST00000374730 KLF17Q5JT82 389 aaPredicted RBP3.66□□□□□ -1.82
USP48-202ENST00000374730 Q6AWC8 147 aa3.66□□□□□ -1.82
USP48-202ENST00000374730 CYB5R2Q6BCY4 276 aa3.66□□□□□ -1.82
USP48-202ENST00000374730 TOMM20LQ6UXN7 152 aa3.66□□□□□ -1.82
USP48-202ENST00000374730 GOLT1AQ6ZVE7 132 aa3.66□□□□□ -1.82
USP48-202ENST00000374730 NIT1Q86X76 327 aa3.66□□□□□ -1.82
USP48-202ENST00000374730 EXOC3-AS1Q8N2X6 119 aa3.66□□□□□ -1.82
USP48-202ENST00000374730 Q8N976 141 aa3.66□□□□□ -1.82
USP48-202ENST00000374730 RCHY1Q96PM5 261 aa3.66□□□□□ -1.82
USP48-202ENST00000374730 ALKBH7Q9BT30 221 aaPredicted RBP3.66□□□□□ -1.82
USP48-202ENST00000374730 CSTL1Q9H114 145 aa3.66□□□□□ -1.82
USP48-202ENST00000374730 Q9H8V8 135 aa3.66□□□□□ -1.82
USP48-202ENST00000374730 LPAR2Q9HBW0 351 aa3.66□□□□□ -1.82
USP48-202ENST00000374730 NRN1Q9NPD7 142 aa3.66□□□□□ -1.82
USP48-202ENST00000374730 ZMAT5Q9UDW3 170 aaKnown RBP3.66□□□□□ -1.82
USP48-202ENST00000374730 RPH3ALQ9UNE2 315 aa3.66□□□□□ -1.82
USP48-202ENST00000374730 PSG8Q9UQ74 426 aa3.66□□□□□ -1.82
USP48-202ENST00000374730 TRAV8-1A0A0A6YYK1 113 aa3.65□□□□□ -1.83
USP48-202ENST00000374730 A0A1W2PRD5 423 aa3.65□□□□□ -1.83
USP48-202ENST00000374730 A0A1W2PRF3 423 aa3.65□□□□□ -1.83
USP48-202ENST00000374730 A0A1W2PRM7 423 aa3.65□□□□□ -1.83
USP48-202ENST00000374730 NCBP2LA6PVI3 153 aaKnown RBP3.65□□□□□ -1.83
USP48-202ENST00000374730 HSBP1O75506 76 aa3.65□□□□□ -1.83
USP48-202ENST00000374730 RAB4AP20338 218 aa3.65□□□□□ -1.83
USP48-202ENST00000374730 PMCHP20382 165 aa3.65□□□□□ -1.83
USP48-202ENST00000374730 RAB9AP51151 201 aa3.65□□□□□ -1.83
USP48-202ENST00000374730 LY6DQ14210 128 aa3.65□□□□□ -1.83
USP48-202ENST00000374730 Q56UQ5 140 aa3.65□□□□□ -1.83
USP48-202ENST00000374730 TCF24Q7RTU0 167 aa3.65□□□□□ -1.83
USP48-202ENST00000374730 PRNTQ86SH4 94 aa3.65□□□□□ -1.83
USP48-202ENST00000374730 OR2D3Q8NGH3 330 aa3.65□□□□□ -1.83
USP48-202ENST00000374730 ZNF502Q8TBZ5 544 aa3.65□□□□□ -1.83
USP48-202ENST00000374730 CHCHD1Q96BP2 118 aaKnown RBP3.65□□□□□ -1.83
USP48-202ENST00000374730 ZC2HC1AQ96GY0 325 aa3.65□□□□□ -1.83
USP48-202ENST00000374730 SGK494Q96LW2 274 aa3.65□□□□□ -1.83
USP48-202ENST00000374730 NDFIP1Q9BT67 221 aa3.65□□□□□ -1.83
USP48-202ENST00000374730 VAMP8Q9BV40 100 aa3.65□□□□□ -1.83
USP48-202ENST00000374730 BPESC1Q9GZL8 116 aa3.65□□□□□ -1.83
USP48-202ENST00000374730 RABAC1Q9UI14 185 aa3.65□□□□□ -1.83
USP48-202ENST00000374730 CFAP46Q8IYW2 2715 aa3.65□□□□□ -1.83
USP48-202ENST00000374730 VPS13CQ709C8 3753 aa3.65□□□□□ -1.83
USP48-202ENST00000374730 LOC102724200A0A096LPH7 203 aaPredicted RBP3.64□□□□□ -1.83
USP48-202ENST00000374730 CENPVL3A0A0U1RRI6 287 aa3.64□□□□□ -1.83
USP48-202ENST00000374730 A0A1B0GUT8 65 aa3.64□□□□□ -1.83
USP48-202ENST00000374730 H0Y8G0 127 aa3.64□□□□□ -1.83
USP48-202ENST00000374730 C19orf84I3L1E1 186 aa3.64□□□□□ -1.83
USP48-202ENST00000374730 M0R3E3 92 aa3.64□□□□□ -1.83
USP48-202ENST00000374730 CHEK1O14757 476 aa3.64□□□□□ -1.83
USP48-202ENST00000374730 NPFFO15130 113 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms