RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 FLI1Q01543 452 aaPredicted RBP13.21□□□□□ -0.29
PBX3-205ENST00000373492 CCDC28AQ8IWP9 274 aa13.21□□□□□ -0.29
PBX3-205ENST00000373492 SGK494Q96LW2 274 aa13.21□□□□□ -0.29
PBX3-205ENST00000373492 TREM1Q9NP99 234 aa13.21□□□□□ -0.29
PBX3-205ENST00000373492 PSG8Q9UQ74 426 aa13.21□□□□□ -0.29
PBX3-205ENST00000373492 C11orf94C9JXX5 98 aa13.2□□□□□ -0.3
PBX3-205ENST00000373492 PRNTQ86SH4 94 aa13.2□□□□□ -0.3
PBX3-205ENST00000373492 C11orf45Q8TAV5 145 aa13.2□□□□□ -0.3
PBX3-205ENST00000373492 TXNDC17Q9BRA2 123 aa13.2□□□□□ -0.3
PBX3-205ENST00000373492 PYGO2Q9BRQ0 406 aa13.2□□□□□ -0.3
PBX3-205ENST00000373492 ZNF324O75467 553 aaPredicted RBP13.19□□□□□ -0.3
PBX3-205ENST00000373492 EMP1P54849 157 aa13.19□□□□□ -0.3
PBX3-205ENST00000373492 UBE2G1P62253 170 aa13.19□□□□□ -0.3
PBX3-205ENST00000373492 PRR9Q5T870 116 aa13.19□□□□□ -0.3
PBX3-205ENST00000373492 C16orf74Q96GX8 76 aa13.19□□□□□ -0.3
PBX3-205ENST00000373492 IGLV2-11P01706 119 aa13.18□□□□□ -0.3
PBX3-205ENST00000373492 AKR1C3P42330 323 aa13.18□□□□□ -0.3
PBX3-205ENST00000373492 PMS2P11Q13670 270 aa13.18□□□□□ -0.3
PBX3-205ENST00000373492 SAPCD1Q5SSQ6 148 aa13.18□□□□□ -0.3
PBX3-205ENST00000373492 FMC1Q96HJ9 113 aa13.18□□□□□ -0.3
PBX3-205ENST00000373492 TRAV34A0A0B4J273 112 aa13.17□□□□□ -0.3
PBX3-205ENST00000373492 TEX48A0A1B0GUV7 120 aa13.17□□□□□ -0.3
PBX3-205ENST00000373492 CXorf65A6NEN9 183 aa13.17□□□□□ -0.3
PBX3-205ENST00000373492 RGS13O14921 159 aa13.17□□□□□ -0.3
PBX3-205ENST00000373492 TAGLN2P37802 199 aaKnown RBP13.17□□□□□ -0.3
PBX3-205ENST00000373492 Q6AWC8 147 aa13.17□□□□□ -0.3
PBX3-205ENST00000373492 TEX261Q6UWH6 196 aa13.17□□□□□ -0.3
PBX3-205ENST00000373492 ZNF493Q6ZR52 646 aa13.17□□□□□ -0.3
PBX3-205ENST00000373492 TMEM263Q8WUH6 116 aaKnown RBP13.17□□□□□ -0.3
PBX3-205ENST00000373492 TVP23CQ96ET8 276 aa13.17□□□□□ -0.3
PBX3-205ENST00000373492 LINC00479Q96M42 142 aa13.17□□□□□ -0.3
PBX3-205ENST00000373492 PRM2P04554 102 aa13.16□□□□□ -0.3
PBX3-205ENST00000373492 AZU1P20160 251 aa13.16□□□□□ -0.3
PBX3-205ENST00000373492 SMUG1Q53HV7 270 aa13.16□□□□□ -0.3
PBX3-205ENST00000373492 LINC00467Q9BRT7 94 aa13.16□□□□□ -0.3
PBX3-205ENST00000373492 RYR3Q15413 4870 aa13.16□□□□□ -0.3
PBX3-205ENST00000373492 DYNC2H1Q8NCM8 4307 aaKnown RBP13.15□□□□□ -0.3
PBX3-205ENST00000373492 TRAV21A0A0B4J279 112 aa13.15□□□□□ -0.3
PBX3-205ENST00000373492 SCO2A0A1W2PP80 73 aa13.15□□□□□ -0.3
PBX3-205ENST00000373492 NUPR2A6NF83 97 aa13.15□□□□□ -0.3
PBX3-205ENST00000373492 CBY3A6NI87 242 aa13.15□□□□□ -0.3
PBX3-205ENST00000373492 S100A9P06702 114 aaKnown RBP13.15□□□□□ -0.3
PBX3-205ENST00000373492 SPART-AS1P0CW21 52 aa13.15□□□□□ -0.3
PBX3-205ENST00000373492 MEF2BQ02080 365 aaPredicted RBP13.15□□□□□ -0.3
PBX3-205ENST00000373492 Q86TA4 180 aa13.15□□□□□ -0.3
PBX3-205ENST00000373492 EIF4E3Q8N5X7 224 aaKnown RBP13.15□□□□□ -0.3
PBX3-205ENST00000373492 C8orf49Q96NF6 230 aa13.15□□□□□ -0.3
PBX3-205ENST00000373492 ZFP30Q9Y2G7 519 aa13.15□□□□□ -0.3
PBX3-205ENST00000373492 TENM2Q9NT68 2774 aa13.14□□□□□ -0.31
PBX3-205ENST00000373492 IGHV1OR15-1A0A075B7D0 117 aa13.14□□□□□ -0.31
PBX3-205ENST00000373492 BCL2P10415 239 aa13.14□□□□□ -0.31
PBX3-205ENST00000373492 TMEM183BQ1AE95 376 aa13.14□□□□□ -0.31
PBX3-205ENST00000373492 FAM159AQ6UWV7 190 aa13.14□□□□□ -0.31
PBX3-205ENST00000373492 ZNF680Q8NEM1 530 aa13.14□□□□□ -0.31
PBX3-205ENST00000373492 LYPD6BQ8NI32 183 aa13.14□□□□□ -0.31
PBX3-205ENST00000373492 RNASE8Q8TDE3 154 aaKnown RBP13.14□□□□□ -0.31
PBX3-205ENST00000373492 VAX2Q9UIW0 290 aa13.14□□□□□ -0.31
PBX3-205ENST00000373492 CELA1Q9UNI1 258 aa13.14□□□□□ -0.31
PBX3-205ENST00000373492 KLF12Q9Y4X4 402 aa13.14□□□□□ -0.31
PBX3-205ENST00000373492 TRBV6-1A0A0K0K1D8 114 aa13.13□□□□□ -0.31
PBX3-205ENST00000373492 SNURFLB1AK76 121 aa13.13□□□□□ -0.31
PBX3-205ENST00000373492 PDE6DO43924 150 aa13.13□□□□□ -0.31
PBX3-205ENST00000373492 NANOS2P60321 138 aaKnown RBP13.13□□□□□ -0.31
PBX3-205ENST00000373492 ANXA2RQ3ZCQ2 193 aa13.13□□□□□ -0.31
PBX3-205ENST00000373492 FAM222AQ5U5X8 452 aa13.13□□□□□ -0.31
PBX3-205ENST00000373492 CEMP1Q6PRD7 247 aaPredicted RBP13.13□□□□□ -0.31
PBX3-205ENST00000373492 C2CD4CQ8TF44 421 aa13.13□□□□□ -0.31
PBX3-205ENST00000373492 DKK2Q9UBU2 259 aa13.13□□□□□ -0.31
PBX3-205ENST00000373492 TIMM8BQ9Y5J9 83 aaPredicted RBP13.13□□□□□ -0.31
PBX3-205ENST00000373492 GCGP01275 180 aa13.12□□□□□ -0.31
PBX3-205ENST00000373492 MUC21Q5SSG8 566 aa13.12□□□□□ -0.31
PBX3-205ENST00000373492 Q6ZQT7 251 aa13.12□□□□□ -0.31
PBX3-205ENST00000373492 LCE6AA0A183 80 aa13.11□□□□□ -0.31
PBX3-205ENST00000373492 LYRM9A8MSI8 78 aa13.11□□□□□ -0.31
PBX3-205ENST00000373492 PFN1P07737 140 aaKnown RBP13.11□□□□□ -0.31
PBX3-205ENST00000373492 PHLDA1Q8WV24 401 aaPredicted RBP13.11□□□□□ -0.31
PBX3-205ENST00000373492 C11orf52Q96A22 123 aa13.11□□□□□ -0.31
PBX3-205ENST00000373492 NAGKQ9UJ70 344 aa13.11□□□□□ -0.31
PBX3-205ENST00000373492 KLK5Q9Y337 293 aaPredicted RBP13.11□□□□□ -0.31
PBX3-205ENST00000373492 PLECQ15149 4684 aaKnown RBP13.11□□□□□ -0.31
PBX3-205ENST00000373492 SACSQ9NZJ4 4579 aa13.1□□□□□ -0.31
PBX3-205ENST00000373492 LYSTQ99698 3801 aa13.1□□□□□ -0.31
PBX3-205ENST00000373492 PLAC8L1A1L4L8 177 aa13.1□□□□□ -0.31
PBX3-205ENST00000373492 RBFOX3A6NFN3 312 aa13.1□□□□□ -0.31
PBX3-205ENST00000373492 LTAP01374 205 aa13.1□□□□□ -0.31
PBX3-205ENST00000373492 IBA57Q5T440 356 aaKnown RBP13.1□□□□□ -0.31
PBX3-205ENST00000373492 KCNS1Q96KK3 526 aa13.1□□□□□ -0.31
PBX3-205ENST00000373492 TRGV11A0A075B6L2 103 aa13.09□□□□□ -0.31
PBX3-205ENST00000373492 ZNF80P51504 273 aaPredicted RBP13.09□□□□□ -0.31
PBX3-205ENST00000373492 DAD1P61803 113 aa13.09□□□□□ -0.31
PBX3-205ENST00000373492 NOP10Q9NPE3 64 aaKnown RBP13.09□□□□□ -0.31
PBX3-205ENST00000373492 FABP5P3A8MUU1 101 aa13.08□□□□□ -0.32
PBX3-205ENST00000373492 ZNF415Q09FC8 603 aa13.08□□□□□ -0.32
PBX3-205ENST00000373492 C12orf74Q32Q52 190 aa13.08□□□□□ -0.32
PBX3-205ENST00000373492 TDRG1Q3Y452 100 aa13.08□□□□□ -0.32
PBX3-205ENST00000373492 Q6ZTC4 211 aa13.08□□□□□ -0.32
PBX3-205ENST00000373492 ZNF767PQ75MW2 155 aa13.08□□□□□ -0.32
PBX3-205ENST00000373492 BAGE2Q86Y30 109 aa13.08□□□□□ -0.32
PBX3-205ENST00000373492 TMEM183AQ8IXX5 376 aa13.08□□□□□ -0.32
PBX3-205ENST00000373492 SDF2L1Q9HCN8 221 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms