RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 TMEM189A5PLL7 270 aa19.65■□□□□ 0.74
ATPAF1-202ENST00000371937 A0A0J9YX75 114 aa19.65■□□□□ 0.74
ATPAF1-202ENST00000371937 FAM19A4Q96LR4 140 aa19.65■□□□□ 0.74
ATPAF1-202ENST00000371937 TRGC2P03986 189 aa19.64■□□□□ 0.73
ATPAF1-202ENST00000371937 FOXI2Q6ZQN5 318 aa19.64■□□□□ 0.73
ATPAF1-202ENST00000371937 SAP30O75446 220 aa19.63■□□□□ 0.73
ATPAF1-202ENST00000371937 DUSP14O95147 198 aaKnown RBP19.63■□□□□ 0.73
ATPAF1-202ENST00000371937 RPS20P60866 119 aaKnown RBP19.63■□□□□ 0.73
ATPAF1-202ENST00000371937 GTSF1Q8WW33 167 aa19.63■□□□□ 0.73
ATPAF1-202ENST00000371937 CITED1Q99966 193 aa19.63■□□□□ 0.73
ATPAF1-202ENST00000371937 SAV1Q9H4B6 383 aaPredicted RBP19.63■□□□□ 0.73
ATPAF1-202ENST00000371937 CRISP2P16562 243 aa19.62■□□□□ 0.73
ATPAF1-202ENST00000371937 FOXA3P55318 350 aaPredicted RBP19.62■□□□□ 0.73
ATPAF1-202ENST00000371937 COX19Q49B96 90 aa19.62■□□□□ 0.73
ATPAF1-202ENST00000371937 ZFAND2AQ8N6M9 145 aa19.62■□□□□ 0.73
ATPAF1-202ENST00000371937 SPINK4O60575 86 aa19.62■□□□□ 0.73
ATPAF1-202ENST00000371937 GDF5OSQ5U4N7 250 aa19.62■□□□□ 0.73
ATPAF1-202ENST00000371937 ODF3Q96PU9 254 aa19.62■□□□□ 0.73
ATPAF1-202ENST00000371937 ORM1P02763 201 aa19.61■□□□□ 0.73
ATPAF1-202ENST00000371937 GPX1P07203 203 aa19.61■□□□□ 0.73
ATPAF1-202ENST00000371937 CD33P20138 364 aa19.61■□□□□ 0.73
ATPAF1-202ENST00000371937 Q6AWC8 147 aa19.61■□□□□ 0.73
ATPAF1-202ENST00000371937 GZMBP10144 247 aa19.6■□□□□ 0.73
ATPAF1-202ENST00000371937 DEFB131AP59861 70 aa19.6■□□□□ 0.73
ATPAF1-202ENST00000371937 RASL11AQ6T310 242 aa19.6■□□□□ 0.73
ATPAF1-202ENST00000371937 ATP5L2Q7Z4Y8 100 aa19.6■□□□□ 0.73
ATPAF1-202ENST00000371937 ZFP82Q8N141 532 aa19.6■□□□□ 0.73
ATPAF1-202ENST00000371937 ZNF256Q9Y2P7 627 aaPredicted RBP19.6■□□□□ 0.73
ATPAF1-202ENST00000371937 LINC01559Q495D7 138 aa19.6■□□□□ 0.73
ATPAF1-202ENST00000371937 MRPL54Q6P161 138 aaKnown RBP19.6■□□□□ 0.73
ATPAF1-202ENST00000371937 WDR73Q6P4I2 378 aa19.6■□□□□ 0.73
ATPAF1-202ENST00000371937 APRG1Q8IVJ8 170 aa19.6■□□□□ 0.73
ATPAF1-202ENST00000371937 LINC00482Q8N8I6 264 aa19.6■□□□□ 0.73
ATPAF1-202ENST00000371937 OR2K2Q8NGT1 345 aa19.59■□□□□ 0.73
ATPAF1-202ENST00000371937 PGLYRP4Q96LB8 373 aa19.59■□□□□ 0.73
ATPAF1-202ENST00000371937 TRAPPC1Q9Y5R8 145 aa19.59■□□□□ 0.73
ATPAF1-202ENST00000371937 TMSB15BA0A087X1C1 80 aa19.58■□□□□ 0.73
ATPAF1-202ENST00000371937 ACTL10Q5JWF8 245 aa19.58■□□□□ 0.73
ATPAF1-202ENST00000371937 GNB1LQ9BYB4 327 aa19.58■□□□□ 0.73
ATPAF1-202ENST00000371937 TEP1Q99973 2627 aaKnown RBP19.58■□□□□ 0.72
ATPAF1-202ENST00000371937 IGLV1-51P01701 117 aa19.58■□□□□ 0.72
ATPAF1-202ENST00000371937 LEPP41159 167 aa19.58■□□□□ 0.72
ATPAF1-202ENST00000371937 PRR9Q5T870 116 aa19.58■□□□□ 0.72
ATPAF1-202ENST00000371937 TRAV21A0A0B4J279 112 aa19.57■□□□□ 0.72
ATPAF1-202ENST00000371937 MAP6D1Q9H9H5 199 aa19.57■□□□□ 0.72
ATPAF1-202ENST00000371937 J3KRW8 73 aa19.56■□□□□ 0.72
ATPAF1-202ENST00000371937 MT-ND6P03923 174 aa19.56■□□□□ 0.72
ATPAF1-202ENST00000371937 KLLNB2CW77 178 aa19.55■□□□□ 0.72
ATPAF1-202ENST00000371937 PHOX2AO14813 284 aa19.55■□□□□ 0.72
ATPAF1-202ENST00000371937 RNASE4P34096 147 aaKnown RBP19.55■□□□□ 0.72
ATPAF1-202ENST00000371937 FABP9Q0Z7S8 132 aa19.55■□□□□ 0.72
ATPAF1-202ENST00000371937 TSPOP30536 169 aa19.55■□□□□ 0.72
ATPAF1-202ENST00000371937 FRZBQ92765 325 aa19.55■□□□□ 0.72
ATPAF1-202ENST00000371937 SORL1Q92673 2214 aa19.54■□□□□ 0.72
ATPAF1-202ENST00000371937 SNURFLB1AK76 121 aa19.54■□□□□ 0.72
ATPAF1-202ENST00000371937 FRMD6-AS1P0C7T7 363 aa19.54■□□□□ 0.72
ATPAF1-202ENST00000371937 HLA-DRB4P13762 266 aa19.54■□□□□ 0.72
ATPAF1-202ENST00000371937 HLA-DRB4X5D2U9 266 aa19.54■□□□□ 0.72
ATPAF1-202ENST00000371937 CMC4P56277 68 aaPredicted RBP19.53■□□□□ 0.72
ATPAF1-202ENST00000371937 RAB4BP61018 213 aa19.53■□□□□ 0.72
ATPAF1-202ENST00000371937 BORCS7Q96B45 105 aa19.53■□□□□ 0.72
ATPAF1-202ENST00000371937 C11orf21Q9P2W6 132 aa19.53■□□□□ 0.72
ATPAF1-202ENST00000371937 ATRQ13535 2644 aa19.53■□□□□ 0.72
ATPAF1-202ENST00000371937 IGKV3D-20A0A0C4DH25 116 aa19.53■□□□□ 0.72
ATPAF1-202ENST00000371937 A0A1B0GUT8 65 aa19.53■□□□□ 0.72
ATPAF1-202ENST00000371937 A0A1B0GXF2 115 aa19.53■□□□□ 0.72
ATPAF1-202ENST00000371937 IGKV3-20P01619 116 aa19.53■□□□□ 0.72
ATPAF1-202ENST00000371937 HBBP68871 147 aa19.53■□□□□ 0.72
ATPAF1-202ENST00000371937 KRTAP24-1Q3LI83 254 aa19.53■□□□□ 0.72
ATPAF1-202ENST00000371937 KNCNA6PVL3 124 aa19.52■□□□□ 0.72
ATPAF1-202ENST00000371937 HLA-DQA1P01909 254 aa19.52■□□□□ 0.72
ATPAF1-202ENST00000371937 TMEM136Q6ZRR5 245 aa19.52■□□□□ 0.72
ATPAF1-202ENST00000371937 TPPP3Q9BW30 176 aa19.52■□□□□ 0.72
ATPAF1-202ENST00000371937 TENM1Q9UKZ4 2725 aa19.52■□□□□ 0.72
ATPAF1-202ENST00000371937 H3BMM0 161 aa19.51■□□□□ 0.71
ATPAF1-202ENST00000371937 HIST1H2BKO60814 126 aa19.51■□□□□ 0.71
ATPAF1-202ENST00000371937 S100A6P06703 90 aa19.51■□□□□ 0.71
ATPAF1-202ENST00000371937 HIST1H2BJP06899 126 aa19.51■□□□□ 0.71
ATPAF1-202ENST00000371937 TRGC1P0CF51 173 aa19.51■□□□□ 0.71
ATPAF1-202ENST00000371937 HIST1H2BOP23527 126 aa19.51■□□□□ 0.71
ATPAF1-202ENST00000371937 HIST1H2BBP33778 126 aa19.51■□□□□ 0.71
ATPAF1-202ENST00000371937 CDKN1BP46527 198 aa19.51■□□□□ 0.71
ATPAF1-202ENST00000371937 HIST1H2BDP58876 126 aa19.51■□□□□ 0.71
ATPAF1-202ENST00000371937 HIST1H2BCP62807 126 aa19.51■□□□□ 0.71
ATPAF1-202ENST00000371937 HIST2H2BEQ16778 126 aa19.51■□□□□ 0.71
ATPAF1-202ENST00000371937 HIST2H2BFQ5QNW6 126 aaPredicted RBP19.51■□□□□ 0.71
ATPAF1-202ENST00000371937 ZNF575Q86XF7 245 aa19.51■□□□□ 0.71
ATPAF1-202ENST00000371937 FER1L6-AS1Q8NA97 138 aa19.51■□□□□ 0.71
ATPAF1-202ENST00000371937 HIST1H2BHQ93079 126 aa19.51■□□□□ 0.71
ATPAF1-202ENST00000371937 HIST1H2BNQ99877 126 aa19.51■□□□□ 0.71
ATPAF1-202ENST00000371937 HIST1H2BMQ99879 126 aa19.51■□□□□ 0.71
ATPAF1-202ENST00000371937 MRPL18Q9H0U6 180 aaKnown RBP19.51■□□□□ 0.71
ATPAF1-202ENST00000371937 RIGQ13278 110 aa19.51■□□□□ 0.71
ATPAF1-202ENST00000371937 MAST4O15021 2626 aa19.51■□□□□ 0.71
ATPAF1-202ENST00000371937 A0A1B0GW15 77 aa19.5■□□□□ 0.71
ATPAF1-202ENST00000371937 A8MTW9 85 aa19.5■□□□□ 0.71
ATPAF1-202ENST00000371937 IGLC6P0CF74 106 aa19.5■□□□□ 0.71
ATPAF1-202ENST00000371937 CAMPP49913 170 aa19.5■□□□□ 0.71
ATPAF1-202ENST00000371937 ODF3L2Q3SX64 289 aa19.5■□□□□ 0.71
ATPAF1-202ENST00000371937 LYZL1Q6UWQ5 148 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms