RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 ATG101Q9BSB4 218 aa11.71□□□□□ -0.53
PFDN4-201ENST00000371419 CSTL1Q9H114 145 aa11.71□□□□□ -0.53
PFDN4-201ENST00000371419 A0A0J9YX75 114 aa11.7□□□□□ -0.54
PFDN4-201ENST00000371419 F6UB75 175 aa11.7□□□□□ -0.54
PFDN4-201ENST00000371419 GCGP01275 180 aa11.7□□□□□ -0.54
PFDN4-201ENST00000371419 UBE2G1P62253 170 aa11.7□□□□□ -0.54
PFDN4-201ENST00000371419 PSG9Q00887 426 aa11.7□□□□□ -0.54
PFDN4-201ENST00000371419 TMEM183BQ1AE95 376 aa11.7□□□□□ -0.54
PFDN4-201ENST00000371419 OSTCQ9NRP0 149 aa11.7□□□□□ -0.54
PFDN4-201ENST00000371419 KLF12Q9Y4X4 402 aa11.7□□□□□ -0.54
PFDN4-201ENST00000371419 TRAV9-1A0A075B6T8 112 aa11.7□□□□□ -0.54
PFDN4-201ENST00000371419 K7EN84 100 aa11.7□□□□□ -0.54
PFDN4-201ENST00000371419 ERVFC1-1P60608 527 aa11.7□□□□□ -0.54
PFDN4-201ENST00000371419 MORN3Q6PF18 240 aaPredicted RBP11.7□□□□□ -0.54
PFDN4-201ENST00000371419 CMTM2Q8TAZ6 248 aa11.7□□□□□ -0.54
PFDN4-201ENST00000371419 FMC1Q96HJ9 113 aa11.7□□□□□ -0.54
PFDN4-201ENST00000371419 S100A6P06703 90 aa11.69□□□□□ -0.54
PFDN4-201ENST00000371419 Q6ZWC4 215 aa11.69□□□□□ -0.54
PFDN4-201ENST00000371419 BAGE2Q86Y30 109 aa11.69□□□□□ -0.54
PFDN4-201ENST00000371419 ZFP82Q8N141 532 aa11.69□□□□□ -0.54
PFDN4-201ENST00000371419 OR4B1Q8NGF8 309 aa11.69□□□□□ -0.54
PFDN4-201ENST00000371419 DUSP14O95147 198 aaKnown RBP11.68□□□□□ -0.54
PFDN4-201ENST00000371419 CA1P00915 261 aaPredicted RBP11.68□□□□□ -0.54
PFDN4-201ENST00000371419 TCRAP04437 139 aa11.68□□□□□ -0.54
PFDN4-201ENST00000371419 NUTF2P61970 127 aaKnown RBP11.68□□□□□ -0.54
PFDN4-201ENST00000371419 ARL6IP6Q8N6S5 226 aa11.68□□□□□ -0.54
PFDN4-201ENST00000371419 CLUHP3Q96NS8 147 aa11.68□□□□□ -0.54
PFDN4-201ENST00000371419 AAMDCQ9H7C9 122 aa11.68□□□□□ -0.54
PFDN4-201ENST00000371419 IL36BQ9NZH7 164 aa11.68□□□□□ -0.54
PFDN4-201ENST00000371419 HUWE1Q7Z6Z7 4374 aaKnown RBP11.68□□□□□ -0.54
PFDN4-201ENST00000371419 TENM3Q9P273 2699 aa11.67□□□□□ -0.54
PFDN4-201ENST00000371419 A0A1W2PPQ1 181 aa11.67□□□□□ -0.54
PFDN4-201ENST00000371419 ZNF705FA8MVS1 300 aaPredicted RBP11.67□□□□□ -0.54
PFDN4-201ENST00000371419 K7EQM0 130 aa11.67□□□□□ -0.54
PFDN4-201ENST00000371419 IGKV3-20P01619 116 aa11.67□□□□□ -0.54
PFDN4-201ENST00000371419 IGLV2-8P01709 118 aa11.67□□□□□ -0.54
PFDN4-201ENST00000371419 TYMSP04818 313 aa11.67□□□□□ -0.54
PFDN4-201ENST00000371419 GNG5P63218 68 aa11.67□□□□□ -0.54
PFDN4-201ENST00000371419 OR8A1Q8NGG7 326 aa11.67□□□□□ -0.54
PFDN4-201ENST00000371419 MRPL53Q96EL3 112 aaKnown RBP11.67□□□□□ -0.54
PFDN4-201ENST00000371419 RETNQ9HD89 108 aa11.67□□□□□ -0.54
PFDN4-201ENST00000371419 U3KQK5 164 aa11.67□□□□□ -0.54
PFDN4-201ENST00000371419 TRBV6-1A0A0K0K1D8 114 aa11.66□□□□□ -0.54
PFDN4-201ENST00000371419 MGST1P10620 155 aaKnown RBP11.66□□□□□ -0.54
PFDN4-201ENST00000371419 FAM3BP58499 235 aaPredicted RBP11.66□□□□□ -0.54
PFDN4-201ENST00000371419 RPL19P84098 196 aaKnown RBP11.66□□□□□ -0.54
PFDN4-201ENST00000371419 DEFB135Q30KP9 77 aa11.66□□□□□ -0.54
PFDN4-201ENST00000371419 FAM231DQ6ZW35 169 aa11.66□□□□□ -0.54
PFDN4-201ENST00000371419 EXOC3-AS1Q8N2X6 119 aa11.66□□□□□ -0.54
PFDN4-201ENST00000371419 RCHY1Q96PM5 261 aa11.66□□□□□ -0.54
PFDN4-201ENST00000371419 TP53TG1Q9Y2A0 90 aa11.66□□□□□ -0.54
PFDN4-201ENST00000371419 STAB2Q8WWQ8 2551 aa11.66□□□□□ -0.54
PFDN4-201ENST00000371419 SERTM2A0A1B0GWG4 89 aa11.65□□□□□ -0.54
PFDN4-201ENST00000371419 A8MTW9 85 aa11.65□□□□□ -0.54
PFDN4-201ENST00000371419 GIG44P09565 113 aaPredicted RBP11.65□□□□□ -0.54
PFDN4-201ENST00000371419 ZNF705DP0CH99 300 aaPredicted RBP11.65□□□□□ -0.54
PFDN4-201ENST00000371419 ZNF705BP0CI00 300 aaPredicted RBP11.65□□□□□ -0.54
PFDN4-201ENST00000371419 HIST1H1AQ02539 215 aaPredicted RBP11.65□□□□□ -0.54
PFDN4-201ENST00000371419 OR5I1Q13606 314 aa11.65□□□□□ -0.54
PFDN4-201ENST00000371419 RNF183Q96D59 192 aa11.65□□□□□ -0.54
PFDN4-201ENST00000371419 LINC00479Q96M42 142 aa11.65□□□□□ -0.54
PFDN4-201ENST00000371419 OVOL2Q9BRP0 275 aa11.65□□□□□ -0.54
PFDN4-201ENST00000371419 RPH3ALQ9UNE2 315 aa11.65□□□□□ -0.54
PFDN4-201ENST00000371419 TRAV34A0A0B4J273 112 aa11.64□□□□□ -0.55
PFDN4-201ENST00000371419 PRAC2D3DTV9 90 aa11.64□□□□□ -0.55
PFDN4-201ENST00000371419 M0R3E3 92 aa11.64□□□□□ -0.55
PFDN4-201ENST00000371419 SPRY2O43597 315 aa11.64□□□□□ -0.55
PFDN4-201ENST00000371419 TRGC2P03986 189 aa11.64□□□□□ -0.55
PFDN4-201ENST00000371419 PRB4P10163 310 aaPredicted RBP11.64□□□□□ -0.55
PFDN4-201ENST00000371419 IBA57Q5T440 356 aaKnown RBP11.64□□□□□ -0.55
PFDN4-201ENST00000371419 OR10J6PQ8NGY7 276 aa11.64□□□□□ -0.55
PFDN4-201ENST00000371419 C1QTNF4Q9BXJ3 329 aa11.64□□□□□ -0.55
PFDN4-201ENST00000371419 V9GYV3 84 aa11.64□□□□□ -0.55
PFDN4-201ENST00000371419 FBLL1A6NHQ2 334 aaKnown RBP11.63□□□□□ -0.55
PFDN4-201ENST00000371419 CSN1S1P47710 185 aa11.63□□□□□ -0.55
PFDN4-201ENST00000371419 C5orf52A6NGY3 159 aa11.63□□□□□ -0.55
PFDN4-201ENST00000371419 LTAP01374 205 aa11.63□□□□□ -0.55
PFDN4-201ENST00000371419 AMTNQ6UX39 209 aa11.63□□□□□ -0.55
PFDN4-201ENST00000371419 TMEM75Q8N9X5 138 aa11.63□□□□□ -0.55
PFDN4-201ENST00000371419 MLST8Q9BVC4 326 aa11.63□□□□□ -0.55
PFDN4-201ENST00000371419 XCL2Q9UBD3 114 aa11.63□□□□□ -0.55
PFDN4-201ENST00000371419 GATCO43716 136 aaKnown RBP11.62□□□□□ -0.55
PFDN4-201ENST00000371419 FXYD7P58549 80 aa11.62□□□□□ -0.55
PFDN4-201ENST00000371419 RNASE7Q9H1E1 156 aaKnown RBP11.62□□□□□ -0.55
PFDN4-201ENST00000371419 PPP1R14DQ9NXH3 145 aa11.62□□□□□ -0.55
PFDN4-201ENST00000371419 ZNF492Q9P255 531 aa11.62□□□□□ -0.55
PFDN4-201ENST00000371419 ZNF705GA8MUZ8 300 aaPredicted RBP11.61□□□□□ -0.55
PFDN4-201ENST00000371419 SNRPEP62304 92 aaKnown RBP11.61□□□□□ -0.55
PFDN4-201ENST00000371419 COX19Q49B96 90 aa11.61□□□□□ -0.55
PFDN4-201ENST00000371419 GOLT1AQ6ZVE7 132 aa11.61□□□□□ -0.55
PFDN4-201ENST00000371419 Q86TA4 180 aa11.61□□□□□ -0.55
PFDN4-201ENST00000371419 TMEM183AQ8IXX5 376 aa11.61□□□□□ -0.55
PFDN4-201ENST00000371419 CSNK1G2-AS1Q8NCQ2 148 aa11.61□□□□□ -0.55
PFDN4-201ENST00000371419 ZFP30Q9Y2G7 519 aa11.61□□□□□ -0.55
PFDN4-201ENST00000371419 DIRC3C9JPN6 131 aa11.6□□□□□ -0.55
PFDN4-201ENST00000371419 NPIPB6E9PJ23 425 aa11.6□□□□□ -0.55
PFDN4-201ENST00000371419 AMBPP02760 352 aa11.6□□□□□ -0.55
PFDN4-201ENST00000371419 NHLRC2Q8NBF2 726 aa11.6□□□□□ -0.55
PFDN4-201ENST00000371419 SMIM27A0A1W2PRY6 76 aa11.59□□□□□ -0.55
PFDN4-201ENST00000371419 HIST1H2BKO60814 126 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms