RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 PRO1854Q9UHT4 67 aa13.62□□□□□ -0.23
PTP4A1-201ENST00000370651 FGF6P10767 208 aa13.62□□□□□ -0.23
PTP4A1-201ENST00000370651 CEACAM8P31997 349 aaPredicted RBP13.62□□□□□ -0.23
PTP4A1-201ENST00000370651 C6orf226Q5I0X4 101 aa13.62□□□□□ -0.23
PTP4A1-201ENST00000370651 ZNF625Q96I27 306 aaPredicted RBP13.62□□□□□ -0.23
PTP4A1-201ENST00000370651 C12orf74Q32Q52 190 aa13.61□□□□□ -0.23
PTP4A1-201ENST00000370651 ZNF491Q8N8L2 437 aa13.61□□□□□ -0.23
PTP4A1-201ENST00000370651 A0A087WX48 190 aa13.61□□□□□ -0.23
PTP4A1-201ENST00000370651 G3V318 75 aa13.61□□□□□ -0.23
PTP4A1-201ENST00000370651 INSP01308 110 aa13.61□□□□□ -0.23
PTP4A1-201ENST00000370651 PCP2Q8IVA1 136 aa13.61□□□□□ -0.23
PTP4A1-201ENST00000370651 LAMTOR3Q9UHA4 124 aa13.61□□□□□ -0.23
PTP4A1-201ENST00000370651 ANXA2RQ3ZCQ2 193 aa13.6□□□□□ -0.23
PTP4A1-201ENST00000370651 C11orf53Q8IXP5 236 aa13.6□□□□□ -0.23
PTP4A1-201ENST00000370651 UBE2E1P51965 193 aa13.6□□□□□ -0.23
PTP4A1-201ENST00000370651 C9orf153Q5TBE3 101 aa13.6□□□□□ -0.23
PTP4A1-201ENST00000370651 RNF138Q8WVD3 245 aa13.6□□□□□ -0.23
PTP4A1-201ENST00000370651 B4DSR2 109 aa13.6□□□□□ -0.23
PTP4A1-201ENST00000370651 C17orf77Q96MU5 243 aa13.6□□□□□ -0.23
PTP4A1-201ENST00000370651 ZNF48Q96MX3 618 aaPredicted RBP13.6□□□□□ -0.23
PTP4A1-201ENST00000370651 BPESC1Q9GZL8 116 aa13.6□□□□□ -0.23
PTP4A1-201ENST00000370651 I3L3M4 83 aa13.59□□□□□ -0.23
PTP4A1-201ENST00000370651 DNAJC30Q96LL9 226 aa13.59□□□□□ -0.23
PTP4A1-201ENST00000370651 CMC4P56277 68 aaPredicted RBP13.59□□□□□ -0.23
PTP4A1-201ENST00000370651 GTF3C1Q12789 2109 aa13.59□□□□□ -0.23
PTP4A1-201ENST00000370651 KNCNA6PVL3 124 aa13.59□□□□□ -0.23
PTP4A1-201ENST00000370651 INAFM2P0DMQ5 153 aa13.59□□□□□ -0.23
PTP4A1-201ENST00000370651 DENND4CQ5VZ89 1909 aa13.58□□□□□ -0.23
PTP4A1-201ENST00000370651 TICRRQ7Z2Z1 1910 aa13.58□□□□□ -0.24
PTP4A1-201ENST00000370651 RHODO00212 210 aa13.58□□□□□ -0.24
PTP4A1-201ENST00000370651 MORN5Q5VZ52 161 aa13.58□□□□□ -0.24
PTP4A1-201ENST00000370651 LINC00173Q6ZV60 143 aa13.58□□□□□ -0.24
PTP4A1-201ENST00000370651 C20orf78Q9BR46 151 aa13.58□□□□□ -0.24
PTP4A1-201ENST00000370651 SYNJ2BPP57105 145 aa13.57□□□□□ -0.24
PTP4A1-201ENST00000370651 SPINK13Q1W4C9 94 aa13.57□□□□□ -0.24
PTP4A1-201ENST00000370651 KRTAP27-1Q3LI81 207 aa13.57□□□□□ -0.24
PTP4A1-201ENST00000370651 UBE2E2Q96LR5 201 aa13.57□□□□□ -0.24
PTP4A1-201ENST00000370651 MSRB2Q9Y3D2 182 aa13.57□□□□□ -0.24
PTP4A1-201ENST00000370651 DSCR9P59020 149 aa13.57□□□□□ -0.24
PTP4A1-201ENST00000370651 J3QQQ9 107 aa13.57□□□□□ -0.24
PTP4A1-201ENST00000370651 EGR2P11161 476 aaPredicted RBP13.57□□□□□ -0.24
PTP4A1-201ENST00000370651 DEFB131AP59861 70 aa13.57□□□□□ -0.24
PTP4A1-201ENST00000370651 LY6DQ14210 128 aa13.57□□□□□ -0.24
PTP4A1-201ENST00000370651 RNASE8Q8TDE3 154 aaKnown RBP13.57□□□□□ -0.24
PTP4A1-201ENST00000370651 CHD3Q12873 2000 aaKnown RBP13.57□□□□□ -0.24
PTP4A1-201ENST00000370651 NDUFA12Q9UI09 145 aa13.56□□□□□ -0.24
PTP4A1-201ENST00000370651 LINC01545Q5VT33 79 aa13.56□□□□□ -0.24
PTP4A1-201ENST00000370651 DTX1Q86Y01 620 aa13.56□□□□□ -0.24
PTP4A1-201ENST00000370651 HLA-DMBP28068 263 aa13.55□□□□□ -0.24
PTP4A1-201ENST00000370651 ANKRD39Q53RE8 183 aa13.55□□□□□ -0.24
PTP4A1-201ENST00000370651 KLK9Q9UKQ9 250 aa13.55□□□□□ -0.24
PTP4A1-201ENST00000370651 SAP30O75446 220 aa13.55□□□□□ -0.24
PTP4A1-201ENST00000370651 IFITM1P13164 125 aa13.55□□□□□ -0.24
PTP4A1-201ENST00000370651 IGF2BP2-AS1Q96M15 143 aa13.55□□□□□ -0.24
PTP4A1-201ENST00000370651 MED13Q9UHV7 2174 aa13.55□□□□□ -0.24
PTP4A1-201ENST00000370651 IGHV1OR15-1A0A075B7D0 117 aa13.55□□□□□ -0.24
PTP4A1-201ENST00000370651 EML6Q6ZMW3 1958 aa13.54□□□□□ -0.24
PTP4A1-201ENST00000370651 SCRT2Q9NQ03 307 aa13.54□□□□□ -0.24
PTP4A1-201ENST00000370651 TRBV25-1A0A075B6N4 114 aa13.54□□□□□ -0.24
PTP4A1-201ENST00000370651 PLXNB3Q9ULL4 1909 aa13.54□□□□□ -0.24
PTP4A1-201ENST00000370651 TEX48A0A1B0GUV7 120 aa13.54□□□□□ -0.24
PTP4A1-201ENST00000370651 KAAG1Q9UBP8 84 aa13.54□□□□□ -0.24
PTP4A1-201ENST00000370651 PLCE1Q9P212 2302 aa13.53□□□□□ -0.24
PTP4A1-201ENST00000370651 NDUFA4O00483 81 aa13.53□□□□□ -0.24
PTP4A1-201ENST00000370651 RUSC1-AS1Q66K80 236 aa13.53□□□□□ -0.24
PTP4A1-201ENST00000370651 PRSS29PA6NIE9 313 aa13.53□□□□□ -0.24
PTP4A1-201ENST00000370651 C1QTNF4Q9BXJ3 329 aa13.53□□□□□ -0.24
PTP4A1-201ENST00000370651 C8orf31Q8N9H6 132 aa13.53□□□□□ -0.24
PTP4A1-201ENST00000370651 GP9P14770 177 aa13.53□□□□□ -0.24
PTP4A1-201ENST00000370651 DYNAPQ8N1N2 210 aa13.53□□□□□ -0.24
PTP4A1-201ENST00000370651 C11orf1Q9H5F2 150 aa13.53□□□□□ -0.24
PTP4A1-201ENST00000370651 PATE2Q6UY27 113 aa13.52□□□□□ -0.24
PTP4A1-201ENST00000370651 SOCS3O14543 225 aa13.52□□□□□ -0.25
PTP4A1-201ENST00000370651 AGPAT4-IT1Q9H0P7 198 aa13.51□□□□□ -0.25
PTP4A1-201ENST00000370651 NTN5Q8WTR8 489 aaPredicted RBP13.51□□□□□ -0.25
PTP4A1-201ENST00000370651 RPL35AP18077 110 aaKnown RBP13.51□□□□□ -0.25
PTP4A1-201ENST00000370651 ZNF493Q6ZR52 646 aa13.51□□□□□ -0.25
PTP4A1-201ENST00000370651 BOD1L2Q8IYS8 172 aa13.51□□□□□ -0.25
PTP4A1-201ENST00000370651 VWC2LB2RUY7 222 aa13.51□□□□□ -0.25
PTP4A1-201ENST00000370651 CARD19Q96LW7 228 aa13.51□□□□□ -0.25
PTP4A1-201ENST00000370651 GATA1P15976 413 aaPredicted RBP13.5□□□□□ -0.25
PTP4A1-201ENST00000370651 KLHL30-AS1Q8NEE0 82 aa13.5□□□□□ -0.25
PTP4A1-201ENST00000370651 IGLL5B9A064 214 aa13.5□□□□□ -0.25
PTP4A1-201ENST00000370651 UTF1Q5T230 341 aa13.5□□□□□ -0.25
PTP4A1-201ENST00000370651 FAM167A-AS1Q96KT0 104 aa13.5□□□□□ -0.25
PTP4A1-201ENST00000370651 FAM215AQ9Y5M1 114 aa13.5□□□□□ -0.25
PTP4A1-201ENST00000370651 IGFL3Q6UXB1 125 aa13.5□□□□□ -0.25
PTP4A1-201ENST00000370651 SH2D6Q7Z4S9 175 aa13.5□□□□□ -0.25
PTP4A1-201ENST00000370651 TRAV12-2A0A075B6T6 113 aa13.5□□□□□ -0.25
PTP4A1-201ENST00000370651 IGHV3-16A0A0C4DH30 117 aa13.5□□□□□ -0.25
PTP4A1-201ENST00000370651 SS18Q15532 418 aa13.5□□□□□ -0.25
PTP4A1-201ENST00000370651 NSUN5P1Q3KNT7 163 aa13.5□□□□□ -0.25
PTP4A1-201ENST00000370651 CFHR4Q92496 578 aa13.5□□□□□ -0.25
PTP4A1-201ENST00000370651 KMT2EQ8IZD2 1858 aa13.49□□□□□ -0.25
PTP4A1-201ENST00000370651 K7EMI3 77 aa13.49□□□□□ -0.25
PTP4A1-201ENST00000370651 TAX1BP3O14907 124 aa13.49□□□□□ -0.25
PTP4A1-201ENST00000370651 FRMD6-AS1P0C7T7 363 aa13.49□□□□□ -0.25
PTP4A1-201ENST00000370651 SPANXDQ9BXN6 97 aa13.49□□□□□ -0.25
PTP4A1-201ENST00000370651 IGHV1-69DA0A0B4J2H0 117 aa13.48□□□□□ -0.25
PTP4A1-201ENST00000370651 SHISA9B4DS77 424 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms