RNA–Protein interactions for RNA: ENST00000367367.8

PTPRC-203, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 2,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-203ENST00000367367 LOC102724200A0A096LPH7 203 aaPredicted RBP2.3□□□□□ -2.04
PTPRC-203ENST00000367367 KRBOX1C9JBD0 128 aa2.3□□□□□ -2.04
PTPRC-203ENST00000367367 FNDC10F2Z333 226 aa2.3□□□□□ -2.04
PTPRC-203ENST00000367367 K7EQG2 157 aa2.3□□□□□ -2.04
PTPRC-203ENST00000367367 EIF3GO75821 320 aaKnown RBP eCLIP2.3□□□□□ -2.04
PTPRC-203ENST00000367367 HBG1P69891 147 aa2.3□□□□□ -2.04
PTPRC-203ENST00000367367 HBG2P69892 147 aa2.3□□□□□ -2.04
PTPRC-203ENST00000367367 CYCSP99999 105 aaKnown RBP2.3□□□□□ -2.04
PTPRC-203ENST00000367367 DEFB135Q30KP9 77 aa2.3□□□□□ -2.04
PTPRC-203ENST00000367367 Q5BKY6 102 aa2.3□□□□□ -2.04
PTPRC-203ENST00000367367 PSMG4Q5JS54 123 aa2.3□□□□□ -2.04
PTPRC-203ENST00000367367 MORN5Q5VZ52 161 aa2.3□□□□□ -2.04
PTPRC-203ENST00000367367 MIC13Q5XKP0 118 aa2.3□□□□□ -2.04
PTPRC-203ENST00000367367 LINC00322Q6ZN03 302 aaPredicted RBP2.3□□□□□ -2.04
PTPRC-203ENST00000367367 MRPL52Q86TS9 123 aaKnown RBP2.3□□□□□ -2.04
PTPRC-203ENST00000367367 ISOC2Q96AB3 205 aa2.3□□□□□ -2.04
PTPRC-203ENST00000367367 RNF126Q9BV68 326 aa2.3□□□□□ -2.04
PTPRC-203ENST00000367367 GGTLC1Q9BX51 225 aa2.3□□□□□ -2.04
PTPRC-203ENST00000367367 NPCDR1Q9BY65 106 aa2.3□□□□□ -2.04
PTPRC-203ENST00000367367 SLC25A39Q9BZJ4 359 aaPredicted RBP2.3□□□□□ -2.04
PTPRC-203ENST00000367367 SMIM3Q9BZL3 60 aa2.3□□□□□ -2.04
PTPRC-203ENST00000367367 MED28Q9H204 178 aa2.3□□□□□ -2.04
PTPRC-203ENST00000367367 ARV1Q9H2C2 271 aa2.3□□□□□ -2.04
PTPRC-203ENST00000367367 HYDINQ4G0P3 5121 aa2.3□□□□□ -2.04
PTPRC-203ENST00000367367 KMT2AQ03164 3969 aa2.3□□□□□ -2.04
PTPRC-203ENST00000367367 IGHV4-28A0A0C4DH34 117 aa2.29□□□□□ -2.04
PTPRC-203ENST00000367367 KNCNA6PVL3 124 aa2.29□□□□□ -2.04
PTPRC-203ENST00000367367 H3BRN7 92 aa2.29□□□□□ -2.04
PTPRC-203ENST00000367367 HYPMO75409 117 aa2.29□□□□□ -2.04
PTPRC-203ENST00000367367 RLN2P04090 185 aa2.29□□□□□ -2.04
PTPRC-203ENST00000367367 C4BPBP20851 252 aa2.29□□□□□ -2.04
PTPRC-203ENST00000367367 FGF7P21781 194 aa2.29□□□□□ -2.04
PTPRC-203ENST00000367367 S100A11P31949 105 aa2.29□□□□□ -2.04
PTPRC-203ENST00000367367 SELENOTP62341 195 aa2.29□□□□□ -2.04
PTPRC-203ENST00000367367 BTN1A1Q13410 526 aa2.29□□□□□ -2.04
PTPRC-203ENST00000367367 OPCMLQ14982 345 aa2.29□□□□□ -2.04
PTPRC-203ENST00000367367 ACTL10Q5JWF8 245 aa2.29□□□□□ -2.04
PTPRC-203ENST00000367367 GDF5OSQ5U4N7 250 aa2.29□□□□□ -2.04
PTPRC-203ENST00000367367 PATE2Q6UY27 113 aa2.29□□□□□ -2.04
PTPRC-203ENST00000367367 LINC00305Q7Z4B0 112 aa2.29□□□□□ -2.04
PTPRC-203ENST00000367367 EIF4E3Q8N5X7 224 aaKnown RBP2.29□□□□□ -2.04
PTPRC-203ENST00000367367 C17orf77Q96MU5 243 aa2.29□□□□□ -2.04
PTPRC-203ENST00000367367 TMEM147Q9BVK8 224 aa2.29□□□□□ -2.04
PTPRC-203ENST00000367367 HIGD1AQ9Y241 93 aa2.29□□□□□ -2.04
PTPRC-203ENST00000367367 TRAV2A0A0B4J234 112 aa2.29□□□□□ -2.04
PTPRC-203ENST00000367367 F6UB75 175 aa2.29□□□□□ -2.04
PTPRC-203ENST00000367367 H3BTX0 84 aa2.29□□□□□ -2.04
PTPRC-203ENST00000367367 SOCS3O14543 225 aa2.29□□□□□ -2.04
PTPRC-203ENST00000367367 COX7A2P2O60397 106 aa2.29□□□□□ -2.04
PTPRC-203ENST00000367367 CFDP00746 253 aaPredicted RBP2.29□□□□□ -2.04
PTPRC-203ENST00000367367 HLA-DMBP28068 263 aa2.29□□□□□ -2.04
PTPRC-203ENST00000367367 RPL12P30050 165 aaKnown RBP2.29□□□□□ -2.04
PTPRC-203ENST00000367367 RAB2AP61019 212 aa2.29□□□□□ -2.04
PTPRC-203ENST00000367367 SNRPD3P62318 126 aaKnown RBP2.29□□□□□ -2.04
PTPRC-203ENST00000367367 RPL24P83731 157 aaKnown RBP2.29□□□□□ -2.04
PTPRC-203ENST00000367367 C1orf194Q5T5A4 169 aa2.29□□□□□ -2.04
PTPRC-203ENST00000367367 Q6ZRG5 221 aa2.29□□□□□ -2.04
PTPRC-203ENST00000367367 RNF182Q8N6D2 247 aa2.29□□□□□ -2.04
PTPRC-203ENST00000367367 LINC00052Q96N35 136 aa2.29□□□□□ -2.04
PTPRC-203ENST00000367367 SHANK2-AS3Q9BTD1 123 aa2.29□□□□□ -2.04
PTPRC-203ENST00000367367 SLC25A31Q9H0C2 315 aa2.29□□□□□ -2.04
PTPRC-203ENST00000367367 SLC39A9Q9NUM3 307 aa2.29□□□□□ -2.04
PTPRC-203ENST00000367367 MED9Q9NWA0 146 aa2.29□□□□□ -2.04
PTPRC-203ENST00000367367 HSPB11Q9Y547 144 aa2.29□□□□□ -2.04
PTPRC-203ENST00000367367 RFNGQ9Y644 331 aa2.29□□□□□ -2.04
PTPRC-203ENST00000367367 PXMP4Q9Y6I8 212 aa2.29□□□□□ -2.04
PTPRC-203ENST00000367367 FXYD6-FXYD2A0A087WZ82 144 aa2.28□□□□□ -2.04
PTPRC-203ENST00000367367 TRAV5A0A0B4J249 113 aa2.28□□□□□ -2.04
PTPRC-203ENST00000367367 KIR2DL5BA0A0G2JN68 375 aa2.28□□□□□ -2.04
PTPRC-203ENST00000367367 KIR2DL5BA0A0G2JPC4 375 aa2.28□□□□□ -2.04
PTPRC-203ENST00000367367 F5H768 121 aa2.28□□□□□ -2.04
PTPRC-203ENST00000367367 G3V3Q6 166 aa2.28□□□□□ -2.04
PTPRC-203ENST00000367367 SLC17A3O00476 420 aa2.28□□□□□ -2.04
PTPRC-203ENST00000367367 IGKV3-20P01619 116 aa2.28□□□□□ -2.04
PTPRC-203ENST00000367367 GIPP09681 153 aaPredicted RBP2.28□□□□□ -2.04
PTPRC-203ENST00000367367 ZNF705DP0CH99 300 aaPredicted RBP2.28□□□□□ -2.04
PTPRC-203ENST00000367367 ZNF705BP0CI00 300 aaPredicted RBP2.28□□□□□ -2.04
PTPRC-203ENST00000367367 RPL7P18124 248 aaKnown RBP2.28□□□□□ -2.04
PTPRC-203ENST00000367367 GALR1P47211 349 aa2.28□□□□□ -2.04
PTPRC-203ENST00000367367 RPL29P47914 159 aaKnown RBP2.28□□□□□ -2.04
PTPRC-203ENST00000367367 APOC4P55056 127 aa2.28□□□□□ -2.04
PTPRC-203ENST00000367367 CLLU1Q5K131 121 aa2.28□□□□□ -2.04
PTPRC-203ENST00000367367 C10orf113Q5VZT2 155 aa2.28□□□□□ -2.04
PTPRC-203ENST00000367367 SPATA31B1PQ5VZV4 182 aa2.28□□□□□ -2.04
PTPRC-203ENST00000367367 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.28□□□□□ -2.04
PTPRC-203ENST00000367367 TRPT1Q86TN4 253 aaKnown RBP2.28□□□□□ -2.04
PTPRC-203ENST00000367367 KIR2DL5AQ8N109 375 aa2.28□□□□□ -2.04
PTPRC-203ENST00000367367 OR2T35Q8NGX2 323 aa2.28□□□□□ -2.04
PTPRC-203ENST00000367367 KIR2DL5BQ8NHK3 375 aa2.28□□□□□ -2.04
PTPRC-203ENST00000367367 ATP5SQ99766 215 aa2.28□□□□□ -2.04
PTPRC-203ENST00000367367 WDR61Q9GZS3 305 aaKnown RBP2.28□□□□□ -2.04
PTPRC-203ENST00000367367 EDA2RQ9HAV5 297 aa2.28□□□□□ -2.04
PTPRC-203ENST00000367367 WFDC1Q9HC57 220 aa2.28□□□□□ -2.04
PTPRC-203ENST00000367367 SPANXA1Q9NS26 97 aa2.28□□□□□ -2.04
PTPRC-203ENST00000367367 DYNC2H1Q8NCM8 4307 aaKnown RBP2.28□□□□□ -2.04
PTPRC-203ENST00000367367 FRAS1Q86XX4 4008 aa2.28□□□□□ -2.05
PTPRC-203ENST00000367367 TRAV8-2A0A0B4J237 113 aa2.28□□□□□ -2.05
PTPRC-203ENST00000367367 H3BQ15 152 aa2.28□□□□□ -2.05
PTPRC-203ENST00000367367 ISLRO14498 428 aa2.28□□□□□ -2.05
PTPRC-203ENST00000367367 MRPS12O15235 138 aaKnown RBP2.28□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms