RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 Q8N976 141 aa11.37□□□□□ -0.59
GABPB1-202ENST00000359031 URB1-AS1Q96HZ7 61 aa11.37□□□□□ -0.59
GABPB1-202ENST00000359031 AGPAT4-IT1Q9H0P7 198 aa11.37□□□□□ -0.59
GABPB1-202ENST00000359031 VPREB3Q9UKI3 123 aa11.37□□□□□ -0.59
GABPB1-202ENST00000359031 C3orf79P0CE67 100 aa11.36□□□□□ -0.59
GABPB1-202ENST00000359031 PSMB8P28062 276 aa11.36□□□□□ -0.59
GABPB1-202ENST00000359031 PRR31Q5SQ13 230 aa11.36□□□□□ -0.59
GABPB1-202ENST00000359031 MAPK1IP1LQ8NDC0 245 aa11.36□□□□□ -0.59
GABPB1-202ENST00000359031 NDUFAF3Q9BU61 184 aa11.36□□□□□ -0.59
GABPB1-202ENST00000359031 LENEPQ9Y5L5 61 aa11.36□□□□□ -0.59
GABPB1-202ENST00000359031 IGHV7-4-1A0A0J9YVY3 117 aa11.35□□□□□ -0.59
GABPB1-202ENST00000359031 FAM181BA6NEQ2 426 aa11.35□□□□□ -0.59
GABPB1-202ENST00000359031 SOCS3O14543 225 aa11.35□□□□□ -0.59
GABPB1-202ENST00000359031 WFDC11Q8NEX6 87 aa11.35□□□□□ -0.59
GABPB1-202ENST00000359031 C14orf144Q96I85 54 aa11.35□□□□□ -0.59
GABPB1-202ENST00000359031 VAMP8Q9BV40 100 aa11.35□□□□□ -0.59
GABPB1-202ENST00000359031 CNFNQ9BYD5 112 aa11.35□□□□□ -0.59
GABPB1-202ENST00000359031 DAZ1Q9NQZ3 744 aaKnown RBP11.35□□□□□ -0.59
GABPB1-202ENST00000359031 PEF1Q9UBV8 284 aaKnown RBP11.35□□□□□ -0.59
GABPB1-202ENST00000359031 K7EMT4 169 aa11.35□□□□□ -0.59
GABPB1-202ENST00000359031 OVOL1O14753 267 aa11.35□□□□□ -0.59
GABPB1-202ENST00000359031 ORM1P02763 201 aa11.35□□□□□ -0.59
GABPB1-202ENST00000359031 TMEM95Q3KNT9 176 aa11.35□□□□□ -0.59
GABPB1-202ENST00000359031 Q6YL49 198 aa11.35□□□□□ -0.59
GABPB1-202ENST00000359031 GPHB5Q86YW7 130 aa11.35□□□□□ -0.59
GABPB1-202ENST00000359031 ZNF738Q8NE65 137 aa11.35□□□□□ -0.59
GABPB1-202ENST00000359031 C20orf144Q9BQM9 153 aa11.35□□□□□ -0.59
GABPB1-202ENST00000359031 LINC00614P0C842 121 aa11.34□□□□□ -0.59
GABPB1-202ENST00000359031 FAM104BQ5XKR9 115 aa11.34□□□□□ -0.59
GABPB1-202ENST00000359031 PRSS57Q6UWY2 283 aa11.34□□□□□ -0.59
GABPB1-202ENST00000359031 LCNL1Q6ZST4 164 aa11.34□□□□□ -0.59
GABPB1-202ENST00000359031 C20orf173Q96LM9 149 aa11.34□□□□□ -0.59
GABPB1-202ENST00000359031 TMEM213A2RRL7 107 aa11.33□□□□□ -0.6
GABPB1-202ENST00000359031 FAM106AQ4KMX7 169 aa11.33□□□□□ -0.6
GABPB1-202ENST00000359031 SAMD13Q5VXD3 122 aa11.33□□□□□ -0.6
GABPB1-202ENST00000359031 U3KQK5 164 aa11.33□□□□□ -0.6
GABPB1-202ENST00000359031 ACANP16112 2415 aa11.33□□□□□ -0.6
GABPB1-202ENST00000359031 IGHV1-24A0A0C4DH33 117 aa11.32□□□□□ -0.6
GABPB1-202ENST00000359031 M0QZ24 198 aa11.32□□□□□ -0.6
GABPB1-202ENST00000359031 OR5AL1P0C617 328 aa11.32□□□□□ -0.6
GABPB1-202ENST00000359031 LINC00477Q96M19 166 aa11.32□□□□□ -0.6
GABPB1-202ENST00000359031 RHPN1-AS1Q9BWJ2 59 aa11.32□□□□□ -0.6
GABPB1-202ENST00000359031 ZNF469Q96JG9 3925 aaPredicted RBP11.32□□□□□ -0.6
GABPB1-202ENST00000359031 BTF3P20290 206 aaKnown RBP11.31□□□□□ -0.6
GABPB1-202ENST00000359031 TWIST1Q15672 202 aa11.31□□□□□ -0.6
GABPB1-202ENST00000359031 ZNF575Q86XF7 245 aa11.31□□□□□ -0.6
GABPB1-202ENST00000359031 OR10J6PQ8NGY7 276 aa11.31□□□□□ -0.6
GABPB1-202ENST00000359031 Q96MF0 132 aa11.31□□□□□ -0.6
GABPB1-202ENST00000359031 MDFIQ99750 246 aa11.31□□□□□ -0.6
GABPB1-202ENST00000359031 SMPXQ9UHP9 88 aa11.31□□□□□ -0.6
GABPB1-202ENST00000359031 UFC1Q9Y3C8 167 aa11.31□□□□□ -0.6
GABPB1-202ENST00000359031 C2orf70A6NJV1 201 aa11.31□□□□□ -0.6
GABPB1-202ENST00000359031 FOXE3Q13461 319 aa11.31□□□□□ -0.6
GABPB1-202ENST00000359031 PMCHL1Q16048 86 aa11.31□□□□□ -0.6
GABPB1-202ENST00000359031 EBLN2Q6P2I7 272 aa11.31□□□□□ -0.6
GABPB1-202ENST00000359031 AMN1Q8IY45 258 aa11.31□□□□□ -0.6
GABPB1-202ENST00000359031 ORMDL3Q8N138 153 aa11.31□□□□□ -0.6
GABPB1-202ENST00000359031 TMEM191AQ9H0A3 160 aa11.31□□□□□ -0.6
GABPB1-202ENST00000359031 PAM16Q9Y3D7 125 aa11.31□□□□□ -0.6
GABPB1-202ENST00000359031 FLNAP21333 2647 aaKnown RBP11.3□□□□□ -0.6
GABPB1-202ENST00000359031 IGKV3D-20A0A0C4DH25 116 aa11.3□□□□□ -0.6
GABPB1-202ENST00000359031 D6R8Y8 96 aa11.3□□□□□ -0.6
GABPB1-202ENST00000359031 ELANEP08246 267 aa11.3□□□□□ -0.6
GABPB1-202ENST00000359031 MRPL51Q4U2R6 128 aaKnown RBP11.3□□□□□ -0.6
GABPB1-202ENST00000359031 TM4SF20Q53R12 229 aa11.3□□□□□ -0.6
GABPB1-202ENST00000359031 KRTAP1-3Q8IUG1 177 aa11.3□□□□□ -0.6
GABPB1-202ENST00000359031 ZNF702PQ9H963 129 aa11.3□□□□□ -0.6
GABPB1-202ENST00000359031 TRBV7-9A0A0J9YWB2 115 aa11.29□□□□□ -0.6
GABPB1-202ENST00000359031 LEPROTL1O95214 131 aa11.29□□□□□ -0.6
GABPB1-202ENST00000359031 TDRG1Q3Y452 100 aa11.29□□□□□ -0.6
GABPB1-202ENST00000359031 FA2HQ7L5A8 372 aa11.29□□□□□ -0.6
GABPB1-202ENST00000359031 PRIMA1Q86XR5 153 aa11.29□□□□□ -0.6
GABPB1-202ENST00000359031 MYOZ3Q8TDC0 251 aa11.29□□□□□ -0.6
GABPB1-202ENST00000359031 PRELID3AQ96N28 172 aa11.29□□□□□ -0.6
GABPB1-202ENST00000359031 TMEM70Q9BUB7 260 aa11.29□□□□□ -0.6
GABPB1-202ENST00000359031 AP5S1Q9NUS5 200 aa11.29□□□□□ -0.6
GABPB1-202ENST00000359031 MAP1AP78559 2803 aaPredicted RBP11.29□□□□□ -0.6
GABPB1-202ENST00000359031 LGALS1P09382 135 aaKnown RBP11.28□□□□□ -0.6
GABPB1-202ENST00000359031 RPL11P62913 178 aaKnown RBP11.28□□□□□ -0.6
GABPB1-202ENST00000359031 LBHQ53QV2 105 aaPredicted RBP11.28□□□□□ -0.6
GABPB1-202ENST00000359031 C11orf21Q9P2W6 132 aa11.28□□□□□ -0.6
GABPB1-202ENST00000359031 MUC21A0A0G2JKD1 596 aa11.27□□□□□ -0.6
GABPB1-202ENST00000359031 MUC21A0A140T8X8 626 aa11.27□□□□□ -0.6
GABPB1-202ENST00000359031 CRXO43186 299 aaPredicted RBP11.27□□□□□ -0.6
GABPB1-202ENST00000359031 HOXA3O43365 443 aaPredicted RBP11.27□□□□□ -0.6
GABPB1-202ENST00000359031 CSN3P07498 182 aa11.27□□□□□ -0.6
GABPB1-202ENST00000359031 MUC21Q5SSG8 566 aa11.27□□□□□ -0.6
GABPB1-202ENST00000359031 TEX29Q8N6K0 151 aa11.27□□□□□ -0.6
GABPB1-202ENST00000359031 PRSS3P2Q8NHM4 247 aa11.27□□□□□ -0.6
GABPB1-202ENST00000359031 MIEN1Q9BRT3 115 aa11.27□□□□□ -0.6
GABPB1-202ENST00000359031 HSPB8Q9UJY1 196 aa11.27□□□□□ -0.6
GABPB1-202ENST00000359031 VPS13CQ709C8 3753 aa11.27□□□□□ -0.6
GABPB1-202ENST00000359031 C20orf202A1L168 122 aa11.27□□□□□ -0.61
GABPB1-202ENST00000359031 LY6G6DO95868 133 aa11.27□□□□□ -0.61
GABPB1-202ENST00000359031 PPBPP02775 128 aa11.27□□□□□ -0.61
GABPB1-202ENST00000359031 RPLP1P05386 114 aaKnown RBP11.27□□□□□ -0.61
GABPB1-202ENST00000359031 ID1P41134 155 aa11.27□□□□□ -0.61
GABPB1-202ENST00000359031 SSTP61278 116 aa11.27□□□□□ -0.61
GABPB1-202ENST00000359031 C10orf99Q6UWK7 81 aa11.27□□□□□ -0.61
GABPB1-202ENST00000359031 MRPL52Q86TS9 123 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms