RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 BMPR1BO00238 502 aa9.82□□□□□ -0.84
GGPS1-202ENST00000358966 ISLRO14498 428 aa9.82□□□□□ -0.84
GGPS1-202ENST00000358966 SNAI2O43623 268 aa9.82□□□□□ -0.84
GGPS1-202ENST00000358966 HSBP1O75506 76 aa9.82□□□□□ -0.84
GGPS1-202ENST00000358966 GP9P14770 177 aa9.82□□□□□ -0.84
GGPS1-202ENST00000358966 MFAP4P55083 255 aa9.82□□□□□ -0.84
GGPS1-202ENST00000358966 GAGE5Q13069 117 aa9.82□□□□□ -0.84
GGPS1-202ENST00000358966 GAGE6Q13070 117 aa9.82□□□□□ -0.84
GGPS1-202ENST00000358966 ADAMTSL5Q6ZMM2 481 aa9.82□□□□□ -0.84
GGPS1-202ENST00000358966 ZNF418Q8TF45 676 aaPredicted RBP9.82□□□□□ -0.84
GGPS1-202ENST00000358966 SCRT2Q9NQ03 307 aa9.82□□□□□ -0.84
GGPS1-202ENST00000358966 ERG28Q9UKR5 140 aa9.82□□□□□ -0.84
GGPS1-202ENST00000358966 OTOGQ6ZRI0 2925 aa9.81□□□□□ -0.84
GGPS1-202ENST00000358966 NIPBLQ6KC79 2804 aaeCLIP9.81□□□□□ -0.84
GGPS1-202ENST00000358966 J3QR89 54 aa9.81□□□□□ -0.84
GGPS1-202ENST00000358966 CTSGP08311 255 aa9.81□□□□□ -0.84
GGPS1-202ENST00000358966 HIST1H1EP10412 219 aaKnown RBP9.81□□□□□ -0.84
GGPS1-202ENST00000358966 FCGR2BP31994 310 aaPredicted RBP9.81□□□□□ -0.84
GGPS1-202ENST00000358966 TMEM97Q5BJF2 176 aa9.81□□□□□ -0.84
GGPS1-202ENST00000358966 CLEC19AQ6UXS0 136 aa9.81□□□□□ -0.84
GGPS1-202ENST00000358966 FOXI2Q6ZQN5 318 aa9.81□□□□□ -0.84
GGPS1-202ENST00000358966 YAE1D1Q9NRH1 226 aa9.81□□□□□ -0.84
GGPS1-202ENST00000358966 IGHV3-49A0A0A0MS15 119 aa9.81□□□□□ -0.84
GGPS1-202ENST00000358966 IGHV3-66A0A0C4DH42 116 aa9.81□□□□□ -0.84
GGPS1-202ENST00000358966 SLC35B1P78383 322 aa9.81□□□□□ -0.84
GGPS1-202ENST00000358966 CENPWQ5EE01 88 aa9.81□□□□□ -0.84
GGPS1-202ENST00000358966 EXOC3-AS1Q8N2X6 119 aa9.81□□□□□ -0.84
GGPS1-202ENST00000358966 FAM110DQ8TAY7 271 aaPredicted RBP9.81□□□□□ -0.84
GGPS1-202ENST00000358966 CCDC140Q96MF4 163 aa9.81□□□□□ -0.84
GGPS1-202ENST00000358966 A0A1W2PPM0 123 aa9.8□□□□□ -0.84
GGPS1-202ENST00000358966 C10orf99Q6UWK7 81 aa9.8□□□□□ -0.84
GGPS1-202ENST00000358966 TMEM136Q6ZRR5 245 aa9.8□□□□□ -0.84
GGPS1-202ENST00000358966 ZNF329Q86UD4 541 aa9.8□□□□□ -0.84
GGPS1-202ENST00000358966 TMEM70Q9BUB7 260 aa9.8□□□□□ -0.84
GGPS1-202ENST00000358966 FLNBO75369 2602 aaKnown RBP9.8□□□□□ -0.84
GGPS1-202ENST00000358966 A6NDX4 124 aa9.8□□□□□ -0.84
GGPS1-202ENST00000358966 CA1P00915 261 aaPredicted RBP9.8□□□□□ -0.84
GGPS1-202ENST00000358966 FA2HQ7L5A8 372 aa9.8□□□□□ -0.84
GGPS1-202ENST00000358966 C18orf32Q8TCD1 76 aa9.8□□□□□ -0.84
GGPS1-202ENST00000358966 MBD6Q96DN6 1003 aa9.8□□□□□ -0.84
GGPS1-202ENST00000358966 ZNF414Q96IQ9 312 aa9.8□□□□□ -0.84
GGPS1-202ENST00000358966 SPXQ9BT56 116 aa9.8□□□□□ -0.84
GGPS1-202ENST00000358966 KLK15Q9H2R5 256 aa9.8□□□□□ -0.84
GGPS1-202ENST00000358966 TRAV41A0A0B4J266 112 aa9.79□□□□□ -0.84
GGPS1-202ENST00000358966 TRBV12-3P01733 135 aa9.79□□□□□ -0.84
GGPS1-202ENST00000358966 IGHV3-11P01762 117 aa9.79□□□□□ -0.84
GGPS1-202ENST00000358966 MT-ND6P03923 174 aa9.79□□□□□ -0.84
GGPS1-202ENST00000358966 LOXL1Q08397 574 aaPredicted RBP9.79□□□□□ -0.84
GGPS1-202ENST00000358966 KIR3DS1Q14943 382 aa9.79□□□□□ -0.84
GGPS1-202ENST00000358966 RPEL1Q2QD12 228 aa9.79□□□□□ -0.84
GGPS1-202ENST00000358966 C2orf91Q6ZV80 131 aa9.79□□□□□ -0.84
GGPS1-202ENST00000358966 GPR82Q96P67 336 aa9.79□□□□□ -0.84
GGPS1-202ENST00000358966 SPAG8Q99932 426 aaPredicted RBP9.79□□□□□ -0.84
GGPS1-202ENST00000358966 PGPA6NDG6 321 aa9.79□□□□□ -0.84
GGPS1-202ENST00000358966 A6NDN8 102 aa9.79□□□□□ -0.84
GGPS1-202ENST00000358966 TRAV8-1A0A0A6YYK1 113 aa9.78□□□□□ -0.84
GGPS1-202ENST00000358966 A0A1W2PRE2 83 aa9.78□□□□□ -0.84
GGPS1-202ENST00000358966 HELTA6NFD8 242 aa9.78□□□□□ -0.84
GGPS1-202ENST00000358966 C11orf52Q96A22 123 aa9.78□□□□□ -0.84
GGPS1-202ENST00000358966 BEX4Q9NWD9 120 aaPredicted RBP9.78□□□□□ -0.84
GGPS1-202ENST00000358966 HSPB8Q9UJY1 196 aa9.78□□□□□ -0.84
GGPS1-202ENST00000358966 IGFL4Q6B9Z1 124 aa9.78□□□□□ -0.84
GGPS1-202ENST00000358966 ZNF502Q8TBZ5 544 aa9.78□□□□□ -0.84
GGPS1-202ENST00000358966 NDFIP1Q9BT67 221 aa9.78□□□□□ -0.84
GGPS1-202ENST00000358966 RNASE7Q9H1E1 156 aaKnown RBP9.78□□□□□ -0.84
GGPS1-202ENST00000358966 SPANXB1Q9NS25 103 aaPredicted RBP9.78□□□□□ -0.84
GGPS1-202ENST00000358966 SLC25A5P05141 298 aaKnown RBP9.77□□□□□ -0.84
GGPS1-202ENST00000358966 MGST1P10620 155 aaKnown RBP9.77□□□□□ -0.84
GGPS1-202ENST00000358966 FABP2P12104 132 aa9.77□□□□□ -0.84
GGPS1-202ENST00000358966 COX19Q49B96 90 aa9.77□□□□□ -0.84
GGPS1-202ENST00000358966 HIST2H2BDQ6DRA6 164 aa9.77□□□□□ -0.84
GGPS1-202ENST00000358966 BPIFA4PQ86YQ2 179 aa9.77□□□□□ -0.84
GGPS1-202ENST00000358966 Q9H3A6 140 aa9.77□□□□□ -0.84
GGPS1-202ENST00000358966 H3BRN7 92 aa9.77□□□□□ -0.85
GGPS1-202ENST00000358966 TRGV3P03979 118 aa9.77□□□□□ -0.85
GGPS1-202ENST00000358966 SPINK8P0C7L1 97 aa9.77□□□□□ -0.85
GGPS1-202ENST00000358966 GNG4P50150 75 aa9.77□□□□□ -0.85
GGPS1-202ENST00000358966 RNASEKQ6P5S7 137 aaKnown RBP9.77□□□□□ -0.85
GGPS1-202ENST00000358966 SHANK2-AS3Q9BTD1 123 aa9.77□□□□□ -0.85
GGPS1-202ENST00000358966 WI2-2373I1.2A0A1W2PRP0 233 aa9.76□□□□□ -0.85
GGPS1-202ENST00000358966 M0R3E3 92 aa9.76□□□□□ -0.85
GGPS1-202ENST00000358966 ANAPC13Q9BS18 74 aa9.76□□□□□ -0.85
GGPS1-202ENST00000358966 PEX7O00628 323 aa9.76□□□□□ -0.85
GGPS1-202ENST00000358966 APOHP02749 345 aaPredicted RBP9.76□□□□□ -0.85
GGPS1-202ENST00000358966 WFDC2Q14508 124 aa9.76□□□□□ -0.85
GGPS1-202ENST00000358966 C8orf86Q6ZUL3 223 aa9.76□□□□□ -0.85
GGPS1-202ENST00000358966 SH2D6Q7Z4S9 175 aa9.76□□□□□ -0.85
GGPS1-202ENST00000358966 TXNDC17Q9BRA2 123 aa9.76□□□□□ -0.85
GGPS1-202ENST00000358966 ANK3Q12955 4377 aaKnown RBP9.76□□□□□ -0.85
GGPS1-202ENST00000358966 IGLV2-8P01709 118 aa9.76□□□□□ -0.85
GGPS1-202ENST00000358966 MYCNOSP40205 109 aa9.76□□□□□ -0.85
GGPS1-202ENST00000358966 C19orf54Q5BKX5 351 aa9.76□□□□□ -0.85
GGPS1-202ENST00000358966 MCRIP2Q9BUT9 160 aaKnown RBP9.76□□□□□ -0.85
GGPS1-202ENST00000358966 APCSP02743 223 aa9.75□□□□□ -0.85
GGPS1-202ENST00000358966 TCL1AP56279 114 aa9.75□□□□□ -0.85
GGPS1-202ENST00000358966 IGF2BP2-AS1Q96M15 143 aa9.75□□□□□ -0.85
GGPS1-202ENST00000358966 IGHG2P01859 326 aa9.75□□□□□ -0.85
GGPS1-202ENST00000358966 INSL3P51460 131 aa9.75□□□□□ -0.85
GGPS1-202ENST00000358966 LINC00173Q6ZV60 143 aa9.75□□□□□ -0.85
GGPS1-202ENST00000358966 SYS1-DBNDD2H3BUS1 97 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms