RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 IFI27L1Q96BM0 104 aa11.09□□□□□ -0.63
SIRPA-202ENST00000358771 ODF3BA8MYP8 253 aa11.09□□□□□ -0.63
SIRPA-202ENST00000358771 DNLZQ5SXM8 178 aa11.09□□□□□ -0.63
SIRPA-202ENST00000358771 TMEM97Q5BJF2 176 aa11.08□□□□□ -0.64
SIRPA-202ENST00000358771 FBLL1A6NHQ2 334 aaKnown RBP11.08□□□□□ -0.64
SIRPA-202ENST00000358771 SCGB1D4Q6XE38 83 aa11.08□□□□□ -0.64
SIRPA-202ENST00000358771 Q71RC1 249 aaPredicted RBP11.08□□□□□ -0.64
SIRPA-202ENST00000358771 AGPAT4-IT1Q9H0P7 198 aa11.08□□□□□ -0.64
SIRPA-202ENST00000358771 TRAV26-2A0A0B4J265 109 aa11.08□□□□□ -0.64
SIRPA-202ENST00000358771 FAM231BA6NCW3 169 aa11.08□□□□□ -0.64
SIRPA-202ENST00000358771 IGLL1P15814 213 aa11.08□□□□□ -0.64
SIRPA-202ENST00000358771 TSPOP30536 169 aa11.08□□□□□ -0.64
SIRPA-202ENST00000358771 NUTF2P61970 127 aaKnown RBP11.08□□□□□ -0.64
SIRPA-202ENST00000358771 ZNF56Q15929 161 aa11.08□□□□□ -0.64
SIRPA-202ENST00000358771 C14orf178Q8N769 122 aaPredicted RBP11.08□□□□□ -0.64
SIRPA-202ENST00000358771 ZFHX4Q86UP3 3567 aa11.07□□□□□ -0.64
SIRPA-202ENST00000358771 FAM104BQ5XKR9 115 aa11.07□□□□□ -0.64
SIRPA-202ENST00000358771 C12orf54Q6X4T0 127 aa11.07□□□□□ -0.64
SIRPA-202ENST00000358771 TRAV21A0A0B4J279 112 aa11.07□□□□□ -0.64
SIRPA-202ENST00000358771 IGHV4-59P01825 116 aa11.07□□□□□ -0.64
SIRPA-202ENST00000358771 SYNJ2BPP57105 145 aa11.07□□□□□ -0.64
SIRPA-202ENST00000358771 MRPL51Q4U2R6 128 aaKnown RBP11.07□□□□□ -0.64
SIRPA-202ENST00000358771 STPG4Q8N801 248 aa11.07□□□□□ -0.64
SIRPA-202ENST00000358771 C20orf144Q9BQM9 153 aa11.07□□□□□ -0.64
SIRPA-202ENST00000358771 BUB3O43684 328 aa11.07□□□□□ -0.64
SIRPA-202ENST00000358771 FOXE3Q13461 319 aa11.07□□□□□ -0.64
SIRPA-202ENST00000358771 A0A087X0K7 114 aa11.06□□□□□ -0.64
SIRPA-202ENST00000358771 TRAV12-3A0A0B4J271 114 aa11.06□□□□□ -0.64
SIRPA-202ENST00000358771 MPV17L2Q567V2 206 aa11.06□□□□□ -0.64
SIRPA-202ENST00000358771 PET117Q6UWS5 81 aa11.06□□□□□ -0.64
SIRPA-202ENST00000358771 C9orf139Q6ZV77 190 aa11.06□□□□□ -0.64
SIRPA-202ENST00000358771 C2orf88Q9BSF0 95 aa11.06□□□□□ -0.64
SIRPA-202ENST00000358771 WI2-2373I1.2A0A1W2PRP0 233 aa11.06□□□□□ -0.64
SIRPA-202ENST00000358771 TRBV12-3P01733 135 aa11.06□□□□□ -0.64
SIRPA-202ENST00000358771 IGLC3P0DOY3 106 aa11.06□□□□□ -0.64
SIRPA-202ENST00000358771 NPYP01303 97 aa11.06□□□□□ -0.64
SIRPA-202ENST00000358771 TEX43Q6ZNM6 134 aa11.06□□□□□ -0.64
SIRPA-202ENST00000358771 MLST8Q9BVC4 326 aa11.06□□□□□ -0.64
SIRPA-202ENST00000358771 PRSS22Q9GZN4 317 aa11.06□□□□□ -0.64
SIRPA-202ENST00000358771 ZNF256Q9Y2P7 627 aaPredicted RBP11.06□□□□□ -0.64
SIRPA-202ENST00000358771 GATA1P15976 413 aaPredicted RBP11.05□□□□□ -0.64
SIRPA-202ENST00000358771 C5orf56Q8N8D9 126 aa11.05□□□□□ -0.64
SIRPA-202ENST00000358771 FAM223BA6NKX1 122 aa11.05□□□□□ -0.64
SIRPA-202ENST00000358771 FAM223AQ8IWN6 122 aa11.05□□□□□ -0.64
SIRPA-202ENST00000358771 WIPF2Q8TF74 440 aaPredicted RBP11.05□□□□□ -0.64
SIRPA-202ENST00000358771 LRBAP50851 2863 aa11.05□□□□□ -0.64
SIRPA-202ENST00000358771 C19orf71A6NCJ1 209 aa11.04□□□□□ -0.64
SIRPA-202ENST00000358771 NDUFS8O00217 210 aa11.04□□□□□ -0.64
SIRPA-202ENST00000358771 NAA38Q9BRA0 125 aaKnown RBP11.04□□□□□ -0.64
SIRPA-202ENST00000358771 DAZ1Q9NQZ3 744 aaKnown RBP11.04□□□□□ -0.64
SIRPA-202ENST00000358771 SIGLEC8Q9NYZ4 499 aa11.04□□□□□ -0.64
SIRPA-202ENST00000358771 PEF1Q9UBV8 284 aaKnown RBP11.04□□□□□ -0.64
SIRPA-202ENST00000358771 PAX1P15863 534 aa11.04□□□□□ -0.64
SIRPA-202ENST00000358771 DEFB112Q30KQ8 113 aa11.04□□□□□ -0.64
SIRPA-202ENST00000358771 USMG5Q96IX5 58 aa11.04□□□□□ -0.64
SIRPA-202ENST00000358771 VPS25Q9BRG1 176 aa11.04□□□□□ -0.64
SIRPA-202ENST00000358771 RNF114Q9Y508 228 aa11.04□□□□□ -0.64
SIRPA-202ENST00000358771 VWC2LB2RUY7 222 aa11.03□□□□□ -0.64
SIRPA-202ENST00000358771 PPBPP02775 128 aa11.03□□□□□ -0.64
SIRPA-202ENST00000358771 Q6ZVH6 145 aa11.03□□□□□ -0.64
SIRPA-202ENST00000358771 C10orf105Q8TEF2 133 aa11.03□□□□□ -0.64
SIRPA-202ENST00000358771 MBD6Q96DN6 1003 aa11.03□□□□□ -0.64
SIRPA-202ENST00000358771 SCGB3A1Q96QR1 104 aa11.03□□□□□ -0.64
SIRPA-202ENST00000358771 TNFRSF6BO95407 300 aa11.03□□□□□ -0.64
SIRPA-202ENST00000358771 UNQ9165/PRO28630Q6UXU0 137 aa11.03□□□□□ -0.64
SIRPA-202ENST00000358771 COL27A1Q8IZC6 1860 aaPredicted RBP11.03□□□□□ -0.64
SIRPA-202ENST00000358771 COL12A1Q99715 3063 aa11.03□□□□□ -0.64
SIRPA-202ENST00000358771 OVOL1O14753 267 aa11.03□□□□□ -0.64
SIRPA-202ENST00000358771 MYCNOSP40205 109 aa11.03□□□□□ -0.64
SIRPA-202ENST00000358771 MRGPRG-AS1Q2M3A8 158 aa11.03□□□□□ -0.64
SIRPA-202ENST00000358771 LINC01356Q8N9X3 169 aa11.03□□□□□ -0.64
SIRPA-202ENST00000358771 TMEM158Q8WZ71 300 aa11.03□□□□□ -0.64
SIRPA-202ENST00000358771 ZNF80P51504 273 aaPredicted RBP11.02□□□□□ -0.64
SIRPA-202ENST00000358771 NXT2Q9NPJ8 142 aaKnown RBP11.02□□□□□ -0.64
SIRPA-202ENST00000358771 SRSF9Q13242 221 aaKnown RBP eCLIP11.02□□□□□ -0.65
SIRPA-202ENST00000358771 PRORYQ9H606 182 aa11.02□□□□□ -0.65
SIRPA-202ENST00000358771 A0A087WWL8 130 aa11.02□□□□□ -0.65
SIRPA-202ENST00000358771 CCDC140Q96MF4 163 aa11.02□□□□□ -0.65
SIRPA-202ENST00000358771 ST20Q9HBF5 79 aa11.01□□□□□ -0.65
SIRPA-202ENST00000358771 TRAV12-2A0A075B6T6 113 aa11.01□□□□□ -0.65
SIRPA-202ENST00000358771 KIR2DL5BA0A0G2JN68 375 aa11.01□□□□□ -0.65
SIRPA-202ENST00000358771 KIR2DL5BA0A0G2JPC4 375 aa11.01□□□□□ -0.65
SIRPA-202ENST00000358771 A6NDN8 102 aa11.01□□□□□ -0.65
SIRPA-202ENST00000358771 KIR2DL5AQ8N109 375 aa11.01□□□□□ -0.65
SIRPA-202ENST00000358771 GTSCR1Q86UQ5 136 aa11.01□□□□□ -0.65
SIRPA-202ENST00000358771 LINC00310P59036 64 aa11.01□□□□□ -0.65
SIRPA-202ENST00000358771 DUX3Q96PT4 197 aa11.01□□□□□ -0.65
SIRPA-202ENST00000358771 KIR2DL4Q99706 377 aa11.01□□□□□ -0.65
SIRPA-202ENST00000358771 CRIP1P50238 77 aa11□□□□□ -0.65
SIRPA-202ENST00000358771 LINC00477Q96M19 166 aa11□□□□□ -0.65
SIRPA-202ENST00000358771 TP73-AS1Q9UF72 201 aa11□□□□□ -0.65
SIRPA-202ENST00000358771 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11□□□□□ -0.65
SIRPA-202ENST00000358771 IGHV3-73A0A0B4J1V6 119 aa11□□□□□ -0.65
SIRPA-202ENST00000358771 DGAT2L7PQ6IED9 249 aa11□□□□□ -0.65
SIRPA-202ENST00000358771 KLF5Q13887 457 aaPredicted RBP10.99□□□□□ -0.65
SIRPA-202ENST00000358771 ANXA2RQ3ZCQ2 193 aa10.99□□□□□ -0.65
SIRPA-202ENST00000358771 Q5PR19 223 aa10.99□□□□□ -0.65
SIRPA-202ENST00000358771 OR2K2Q8NGT1 345 aa10.99□□□□□ -0.65
SIRPA-202ENST00000358771 A0A1B0GXF2 115 aa10.99□□□□□ -0.65
SIRPA-202ENST00000358771 ATP5LO75964 103 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms