RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 BAGE2Q86Y30 109 aa18.49■□□□□ 0.55
SSBP3-202ENST00000357475 SMDT1Q9H4I9 107 aa18.49■□□□□ 0.55
SSBP3-202ENST00000357475 HUWE1Q7Z6Z7 4374 aaKnown RBP18.49■□□□□ 0.55
SSBP3-202ENST00000357475 IGLV2-8P01709 118 aa18.49■□□□□ 0.55
SSBP3-202ENST00000357475 S100A9P06702 114 aaKnown RBP18.49■□□□□ 0.55
SSBP3-202ENST00000357475 GPX1P07203 203 aa18.49■□□□□ 0.55
SSBP3-202ENST00000357475 TSPOP30536 169 aa18.49■□□□□ 0.55
SSBP3-202ENST00000357475 TAS2R60P59551 318 aa18.49■□□□□ 0.55
SSBP3-202ENST00000357475 ZC2HC1AQ96GY0 325 aa18.49■□□□□ 0.55
SSBP3-202ENST00000357475 NDFIP1Q9BT67 221 aa18.49■□□□□ 0.55
SSBP3-202ENST00000357475 RETNQ9HD89 108 aa18.49■□□□□ 0.55
SSBP3-202ENST00000357475 TRAV12-3A0A0B4J271 114 aa18.48■□□□□ 0.55
SSBP3-202ENST00000357475 TRBV7-9A0A0J9YWB2 115 aa18.48■□□□□ 0.55
SSBP3-202ENST00000357475 C1orf158Q8N1D5 194 aa18.48■□□□□ 0.55
SSBP3-202ENST00000357475 MLST8Q9BVC4 326 aa18.48■□□□□ 0.55
SSBP3-202ENST00000357475 ZFP30Q9Y2G7 519 aa18.48■□□□□ 0.55
SSBP3-202ENST00000357475 C7orf71A4D174 169 aa18.47■□□□□ 0.55
SSBP3-202ENST00000357475 SAPCD1Q5SSQ6 148 aa18.47■□□□□ 0.55
SSBP3-202ENST00000357475 SFTA3P0C7M3 94 aa18.46■□□□□ 0.55
SSBP3-202ENST00000357475 GNG4P50150 75 aa18.46■□□□□ 0.55
SSBP3-202ENST00000357475 CRIP1P50238 77 aa18.46■□□□□ 0.55
SSBP3-202ENST00000357475 TMEM183AQ8IXX5 376 aa18.46■□□□□ 0.55
SSBP3-202ENST00000357475 EIF4E3Q8N5X7 224 aaKnown RBP18.46■□□□□ 0.55
SSBP3-202ENST00000357475 GCGP01275 180 aa18.45■□□□□ 0.54
SSBP3-202ENST00000357475 SMIM7Q9BQ49 75 aa18.45■□□□□ 0.54
SSBP3-202ENST00000357475 ZNF727A8MUV8 499 aa18.44■□□□□ 0.54
SSBP3-202ENST00000357475 UBE2CO00762 179 aa18.44■□□□□ 0.54
SSBP3-202ENST00000357475 ZNF324O75467 553 aaPredicted RBP18.44■□□□□ 0.54
SSBP3-202ENST00000357475 INSP01308 110 aa18.44■□□□□ 0.54
SSBP3-202ENST00000357475 AMBPP02760 352 aa18.44■□□□□ 0.54
SSBP3-202ENST00000357475 PRM2P04554 102 aa18.44■□□□□ 0.54
SSBP3-202ENST00000357475 SMUG1Q53HV7 270 aa18.44■□□□□ 0.54
SSBP3-202ENST00000357475 UQCC3Q6UW78 93 aa18.44■□□□□ 0.54
SSBP3-202ENST00000357475 SLC7A5P1Q8MH63 180 aa18.44■□□□□ 0.54
SSBP3-202ENST00000357475 C1QTNF4Q9BXJ3 329 aa18.44■□□□□ 0.54
SSBP3-202ENST00000357475 FBN3Q75N90 2809 aa18.44■□□□□ 0.54
SSBP3-202ENST00000357475 IGHV3OR16-12A0A075B7B8 117 aa18.44■□□□□ 0.54
SSBP3-202ENST00000357475 COX8CQ7Z4L0 72 aa18.44■□□□□ 0.54
SSBP3-202ENST00000357475 OCC1Q8TAD7 63 aa18.44■□□□□ 0.54
SSBP3-202ENST00000357475 C9JCJ5 164 aa18.43■□□□□ 0.54
SSBP3-202ENST00000357475 K7EN84 100 aa18.43■□□□□ 0.54
SSBP3-202ENST00000357475 TENM3Q9P273 2699 aa18.42■□□□□ 0.54
SSBP3-202ENST00000357475 SOHLH1Q5JUK2 328 aa18.42■□□□□ 0.54
SSBP3-202ENST00000357475 Q6AWC8 147 aa18.42■□□□□ 0.54
SSBP3-202ENST00000357475 Q6ZWC4 215 aa18.42■□□□□ 0.54
SSBP3-202ENST00000357475 MGST1P10620 155 aaKnown RBP18.41■□□□□ 0.54
SSBP3-202ENST00000357475 ADCYAP1P18509 176 aa18.41■□□□□ 0.54
SSBP3-202ENST00000357475 OR5I1Q13606 314 aa18.41■□□□□ 0.54
SSBP3-202ENST00000357475 RCHY1Q96PM5 261 aa18.41■□□□□ 0.54
SSBP3-202ENST00000357475 C11orf21Q9P2W6 132 aa18.41■□□□□ 0.54
SSBP3-202ENST00000357475 COL7A1Q02388 2944 aa18.41■□□□□ 0.54
SSBP3-202ENST00000357475 PRR27Q6MZM9 219 aa18.4■□□□□ 0.54
SSBP3-202ENST00000357475 ZNF705AQ6ZN79 300 aaPredicted RBP18.4■□□□□ 0.54
SSBP3-202ENST00000357475 RNF183Q96D59 192 aa18.4■□□□□ 0.54
SSBP3-202ENST00000357475 B9D2Q9BPU9 175 aa18.4■□□□□ 0.54
SSBP3-202ENST00000357475 OVOL2Q9BRP0 275 aa18.4■□□□□ 0.54
SSBP3-202ENST00000357475 TMEM218A2RU14 115 aa18.39■□□□□ 0.54
SSBP3-202ENST00000357475 MUC21Q5SSG8 566 aa18.39■□□□□ 0.54
SSBP3-202ENST00000357475 TM2D3Q9BRN9 247 aa18.39■□□□□ 0.54
SSBP3-202ENST00000357475 SH2D1AO60880 128 aa18.39■□□□□ 0.53
SSBP3-202ENST00000357475 PFN1P07737 140 aaKnown RBP18.39■□□□□ 0.53
SSBP3-202ENST00000357475 NIPSNAP3BQ9BS92 247 aa18.39■□□□□ 0.53
SSBP3-202ENST00000357475 SPRY2O43597 315 aa18.38■□□□□ 0.53
SSBP3-202ENST00000357475 LINC01587Q99440 93 aa18.38■□□□□ 0.53
SSBP3-202ENST00000357475 TMEM208Q9BTX3 173 aa18.38■□□□□ 0.53
SSBP3-202ENST00000357475 NAGKQ9UJ70 344 aa18.38■□□□□ 0.53
SSBP3-202ENST00000357475 GOLT1BQ9Y3E0 138 aa18.38■□□□□ 0.53
SSBP3-202ENST00000357475 X6R8D5 127 aa18.38■□□□□ 0.53
SSBP3-202ENST00000357475 TRAV21A0A0B4J279 112 aa18.37■□□□□ 0.53
SSBP3-202ENST00000357475 HTN1P15515 57 aa18.37■□□□□ 0.53
SSBP3-202ENST00000357475 FAM74A3Q4VXF1 159 aa18.37■□□□□ 0.53
SSBP3-202ENST00000357475 LINC01551Q86U37 167 aa18.37■□□□□ 0.53
SSBP3-202ENST00000357475 ZNF705GA8MUZ8 300 aaPredicted RBP18.36■□□□□ 0.53
SSBP3-202ENST00000357475 TMEM241Q24JQ0 296 aa18.36■□□□□ 0.53
SSBP3-202ENST00000357475 FAM162BQ5T6X4 162 aa18.36■□□□□ 0.53
SSBP3-202ENST00000357475 SMIM12Q96EX1 92 aa18.36■□□□□ 0.53
SSBP3-202ENST00000357475 C20orf144Q9BQM9 153 aa18.36■□□□□ 0.53
SSBP3-202ENST00000357475 OR11H2Q8NH07 326 aa18.35■□□□□ 0.53
SSBP3-202ENST00000357475 TP53TG3Q9ULZ0 132 aa18.35■□□□□ 0.53
SSBP3-202ENST00000357475 FABP5P3A8MUU1 101 aa18.34■□□□□ 0.53
SSBP3-202ENST00000357475 H7BYZ3 331 aa18.34■□□□□ 0.53
SSBP3-202ENST00000357475 AZU1P20160 251 aa18.34■□□□□ 0.53
SSBP3-202ENST00000357475 RPL23P62829 140 aaKnown RBP18.34■□□□□ 0.53
SSBP3-202ENST00000357475 ANXA2RQ3ZCQ2 193 aa18.34■□□□□ 0.53
SSBP3-202ENST00000357475 NAT8Q9UHE5 227 aa18.34■□□□□ 0.53
SSBP3-202ENST00000357475 TMEM256Q8N2U0 113 aa18.33■□□□□ 0.53
SSBP3-202ENST00000357475 SPATA25Q9BR10 227 aa18.33■□□□□ 0.53
SSBP3-202ENST00000357475 SDF2L1Q9HCN8 221 aa18.33■□□□□ 0.53
SSBP3-202ENST00000357475 LY96Q9Y6Y9 160 aa18.33■□□□□ 0.53
SSBP3-202ENST00000357475 IGKV3D-20A0A0C4DH25 116 aa18.33■□□□□ 0.52
SSBP3-202ENST00000357475 M0R036 132 aa18.33■□□□□ 0.52
SSBP3-202ENST00000357475 ZNF575Q86XF7 245 aa18.33■□□□□ 0.52
SSBP3-202ENST00000357475 RNASE7Q9H1E1 156 aaKnown RBP18.33■□□□□ 0.52
SSBP3-202ENST00000357475 TP53TG1Q9Y2A0 90 aa18.33■□□□□ 0.52
SSBP3-202ENST00000357475 IGHV1OR15-1A0A075B7D0 117 aa18.32■□□□□ 0.52
SSBP3-202ENST00000357475 C19orf71A6NCJ1 209 aa18.32■□□□□ 0.52
SSBP3-202ENST00000357475 F8W036 122 aa18.32■□□□□ 0.52
SSBP3-202ENST00000357475 RPL19P84098 196 aaKnown RBP18.32■□□□□ 0.52
SSBP3-202ENST00000357475 PYGO2Q9BRQ0 406 aa18.32■□□□□ 0.52
SSBP3-202ENST00000357475 ADIRFQ15847 76 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms