RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 H3BRN7 92 aa12.8□□□□□ -0.36
RXRA-201ENST00000356384 IGHV2-70DA0A0C4DH43 119 aa12.8□□□□□ -0.36
RXRA-201ENST00000356384 J3QQQ9 107 aa12.8□□□□□ -0.36
RXRA-201ENST00000356384 SPTAN1Q13813 2472 aaKnown RBP12.8□□□□□ -0.36
RXRA-201ENST00000356384 C22orf46C9J442 243 aa12.79□□□□□ -0.36
RXRA-201ENST00000356384 CRYBA4P53673 196 aa12.79□□□□□ -0.36
RXRA-201ENST00000356384 BVES-AS1Q5T3Y7 98 aa12.79□□□□□ -0.36
RXRA-201ENST00000356384 GREB1Q4ZG55 1949 aa12.79□□□□□ -0.36
RXRA-201ENST00000356384 H3BMG7 143 aa12.79□□□□□ -0.36
RXRA-201ENST00000356384 NBL1P41271 181 aa12.79□□□□□ -0.36
RXRA-201ENST00000356384 A0A1W2PPM0 123 aa12.79□□□□□ -0.36
RXRA-201ENST00000356384 CR1LQ2VPA4 569 aa12.79□□□□□ -0.36
RXRA-201ENST00000356384 THADAQ6YHU6 1953 aa12.78□□□□□ -0.36
RXRA-201ENST00000356384 SMIM27A0A1W2PRY6 76 aa12.78□□□□□ -0.36
RXRA-201ENST00000356384 RBM3P98179 157 aaKnown RBP12.78□□□□□ -0.36
RXRA-201ENST00000356384 ZC2HC1AQ96GY0 325 aa12.78□□□□□ -0.36
RXRA-201ENST00000356384 IGKV1OR2-108A0A075B7D4 117 aa12.78□□□□□ -0.36
RXRA-201ENST00000356384 F8VRH5 84 aa12.78□□□□□ -0.36
RXRA-201ENST00000356384 NPSP0C0P6 89 aa12.78□□□□□ -0.36
RXRA-201ENST00000356384 ANKRD29Q8N6D5 301 aa12.78□□□□□ -0.36
RXRA-201ENST00000356384 CFHR4Q92496 578 aa12.78□□□□□ -0.36
RXRA-201ENST00000356384 TPSG1Q9NRR2 321 aa12.78□□□□□ -0.36
RXRA-201ENST00000356384 ZNF726P1Q15940 193 aa12.78□□□□□ -0.36
RXRA-201ENST00000356384 XCL1P47992 114 aa12.78□□□□□ -0.36
RXRA-201ENST00000356384 KIAA2026Q5HYC2 2103 aa12.78□□□□□ -0.36
RXRA-201ENST00000356384 C5orf47Q569G3 176 aa12.77□□□□□ -0.36
RXRA-201ENST00000356384 TP53BP1Q12888 1972 aaPredicted RBP12.77□□□□□ -0.36
RXRA-201ENST00000356384 IGKV2D-24A0A075B6R9 120 aa12.77□□□□□ -0.36
RXRA-201ENST00000356384 CLPSL1A2RUU4 121 aa12.77□□□□□ -0.36
RXRA-201ENST00000356384 WDR81Q562E7 1941 aa12.77□□□□□ -0.37
RXRA-201ENST00000356384 A0A0J9YY99 117 aa12.77□□□□□ -0.37
RXRA-201ENST00000356384 C17orf58Q2M2W7 97 aa12.77□□□□□ -0.37
RXRA-201ENST00000356384 AMTNQ6UX39 209 aa12.77□□□□□ -0.37
RXRA-201ENST00000356384 ZNF134P52741 427 aa12.77□□□□□ -0.37
RXRA-201ENST00000356384 COL4A6Q14031 1691 aa12.76□□□□□ -0.37
RXRA-201ENST00000356384 DOCK9Q9BZ29 2069 aa12.76□□□□□ -0.37
RXRA-201ENST00000356384 FAM231DQ6ZW35 169 aa12.76□□□□□ -0.37
RXRA-201ENST00000356384 GAGE12HA6NDE8 117 aa12.76□□□□□ -0.37
RXRA-201ENST00000356384 SHISA9B4DS77 424 aa12.76□□□□□ -0.37
RXRA-201ENST00000356384 E9PQ18 207 aa12.76□□□□□ -0.37
RXRA-201ENST00000356384 LMO1P25800 156 aa12.76□□□□□ -0.37
RXRA-201ENST00000356384 HLA-DMBP28068 263 aa12.76□□□□□ -0.37
RXRA-201ENST00000356384 Q8TCH9 128 aa12.76□□□□□ -0.37
RXRA-201ENST00000356384 TMEM14CQ9P0S9 112 aa12.76□□□□□ -0.37
RXRA-201ENST00000356384 DKK2Q9UBU2 259 aa12.75□□□□□ -0.37
RXRA-201ENST00000356384 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.75□□□□□ -0.37
RXRA-201ENST00000356384 WT1-ASQ06250 92 aa12.75□□□□□ -0.37
RXRA-201ENST00000356384 C15orf53Q8NAA6 179 aa12.75□□□□□ -0.37
RXRA-201ENST00000356384 NTN5Q8WTR8 489 aaPredicted RBP12.75□□□□□ -0.37
RXRA-201ENST00000356384 EGR2P11161 476 aaPredicted RBP12.75□□□□□ -0.37
RXRA-201ENST00000356384 LOXP28300 417 aaPredicted RBP12.75□□□□□ -0.37
RXRA-201ENST00000356384 IGHV4-4A0A075B6R2 117 aa12.75□□□□□ -0.37
RXRA-201ENST00000356384 Q6ZR03 302 aa12.75□□□□□ -0.37
RXRA-201ENST00000356384 PI4KAP42356 2102 aa12.75□□□□□ -0.37
RXRA-201ENST00000356384 SPANXDQ9BXN6 97 aa12.75□□□□□ -0.37
RXRA-201ENST00000356384 VWA8A3KMH1 1905 aa12.74□□□□□ -0.37
RXRA-201ENST00000356384 IGHV7-4-1A0A0J9YVY3 117 aa12.74□□□□□ -0.37
RXRA-201ENST00000356384 TMEM258P61165 79 aa12.74□□□□□ -0.37
RXRA-201ENST00000356384 Q6ZQT7 251 aa12.74□□□□□ -0.37
RXRA-201ENST00000356384 VOPP1Q96AW1 172 aa12.74□□□□□ -0.37
RXRA-201ENST00000356384 EP400Q96L91 3159 aa12.74□□□□□ -0.37
RXRA-201ENST00000356384 NOP10Q9NPE3 64 aaKnown RBP12.74□□□□□ -0.37
RXRA-201ENST00000356384 NDUFS7O75251 213 aa12.73□□□□□ -0.37
RXRA-201ENST00000356384 BOD1L2Q8IYS8 172 aa12.73□□□□□ -0.37
RXRA-201ENST00000356384 Q9HAA7 133 aa12.73□□□□□ -0.37
RXRA-201ENST00000356384 FAM120AOSQ5T036 256 aa12.73□□□□□ -0.37
RXRA-201ENST00000356384 MRPL53Q96EL3 112 aaKnown RBP12.73□□□□□ -0.37
RXRA-201ENST00000356384 DOCK6Q96HP0 2047 aa12.73□□□□□ -0.37
RXRA-201ENST00000356384 FNDC1Q4ZHG4 1894 aaPredicted RBP12.73□□□□□ -0.37
RXRA-201ENST00000356384 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.72□□□□□ -0.37
RXRA-201ENST00000356384 IGKV2-29A2NJV5 120 aaPredicted RBP12.72□□□□□ -0.37
RXRA-201ENST00000356384 CFPP27918 469 aa12.72□□□□□ -0.37
RXRA-201ENST00000356384 PYGO2Q9BRQ0 406 aa12.72□□□□□ -0.37
RXRA-201ENST00000356384 USF3Q68DE3 2245 aa12.72□□□□□ -0.37
RXRA-201ENST00000356384 DIAPH2-AS1Q14236 149 aa12.72□□□□□ -0.37
RXRA-201ENST00000356384 C20orf78Q9BR46 151 aa12.72□□□□□ -0.37
RXRA-201ENST00000356384 IGLV2-23P01705 113 aa12.72□□□□□ -0.37
RXRA-201ENST00000356384 PRB2P02812 416 aaPredicted RBP12.72□□□□□ -0.37
RXRA-201ENST00000356384 C12orf74Q32Q52 190 aa12.72□□□□□ -0.37
RXRA-201ENST00000356384 ATRXP46100 2492 aa12.72□□□□□ -0.37
RXRA-201ENST00000356384 RHOHQ15669 191 aa12.72□□□□□ -0.37
RXRA-201ENST00000356384 GBF1Q92538 1859 aa12.72□□□□□ -0.37
RXRA-201ENST00000356384 DOCK7Q96N67 2140 aa12.72□□□□□ -0.37
RXRA-201ENST00000356384 F6UB75 175 aa12.71□□□□□ -0.37
RXRA-201ENST00000356384 GNRH2O43555 120 aa12.71□□□□□ -0.37
RXRA-201ENST00000356384 WDR86Q86TI4 376 aa12.71□□□□□ -0.37
RXRA-201ENST00000356384 BAALC-AS2P0C853 105 aa12.71□□□□□ -0.37
RXRA-201ENST00000356384 FXYD5Q96DB9 178 aa12.71□□□□□ -0.37
RXRA-201ENST00000356384 Q9H8V8 135 aa12.71□□□□□ -0.37
RXRA-201ENST00000356384 YLPM1P49750 1951 aaKnown RBP12.71□□□□□ -0.37
RXRA-201ENST00000356384 GPR179Q6PRD1 2367 aa12.71□□□□□ -0.37
RXRA-201ENST00000356384 ORMDL1Q9P0S3 153 aa12.71□□□□□ -0.37
RXRA-201ENST00000356384 IGLV3-9A0A075B6K5 115 aa12.71□□□□□ -0.38
RXRA-201ENST00000356384 DKK4Q9UBT3 224 aa12.71□□□□□ -0.38
RXRA-201ENST00000356384 FHL1Q13642 323 aa12.7□□□□□ -0.38
RXRA-201ENST00000356384 U3KQE9 123 aa12.7□□□□□ -0.38
RXRA-201ENST00000356384 IGHV4-28A0A0C4DH34 117 aa12.7□□□□□ -0.38
RXRA-201ENST00000356384 ZMAT4Q9H898 229 aa12.7□□□□□ -0.38
RXRA-201ENST00000356384 IGLC1P0CG04 106 aa12.7□□□□□ -0.38
RXRA-201ENST00000356384 RPL18AQ02543 176 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms