RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 LYSTQ99698 3801 aa11.15□□□□□ -0.62
TSPAN4-201ENST00000346501 TRGV2A0A075B6R0 118 aa11.15□□□□□ -0.62
TSPAN4-201ENST00000346501 KANTRA0A1W2PQU2 76 aa11.15□□□□□ -0.62
TSPAN4-201ENST00000346501 ZNF415Q09FC8 603 aa11.15□□□□□ -0.62
TSPAN4-201ENST00000346501 ZNF345Q14585 488 aa11.15□□□□□ -0.62
TSPAN4-201ENST00000346501 IBA57Q5T440 356 aaKnown RBP11.15□□□□□ -0.62
TSPAN4-201ENST00000346501 GSN-AS1Q9NRJ2 163 aa11.15□□□□□ -0.62
TSPAN4-201ENST00000346501 FBLL1A6NHQ2 334 aaKnown RBP11.14□□□□□ -0.63
TSPAN4-201ENST00000346501 HMSDA8MTL9 139 aa11.14□□□□□ -0.63
TSPAN4-201ENST00000346501 SUMO1P63165 101 aaKnown RBP11.14□□□□□ -0.63
TSPAN4-201ENST00000346501 OR5I1Q13606 314 aa11.14□□□□□ -0.63
TSPAN4-201ENST00000346501 ZFP69Q49AA0 526 aa11.14□□□□□ -0.63
TSPAN4-201ENST00000346501 KCNRGQ8N5I3 272 aa11.14□□□□□ -0.63
TSPAN4-201ENST00000346501 TREM1Q9NP99 234 aa11.14□□□□□ -0.63
TSPAN4-201ENST00000346501 RYR2Q92736 4967 aa11.13□□□□□ -0.63
TSPAN4-201ENST00000346501 TRGV11A0A075B6L2 103 aa11.13□□□□□ -0.63
TSPAN4-201ENST00000346501 TRGV1A0A0A0MS02 117 aa11.13□□□□□ -0.63
TSPAN4-201ENST00000346501 TRAV21A0A0B4J279 112 aa11.13□□□□□ -0.63
TSPAN4-201ENST00000346501 G3V3Q6 166 aa11.13□□□□□ -0.63
TSPAN4-201ENST00000346501 SMLR1H3BR10 107 aa11.13□□□□□ -0.63
TSPAN4-201ENST00000346501 NUDT3O95989 172 aa11.13□□□□□ -0.63
TSPAN4-201ENST00000346501 IFNA7P01567 189 aa11.13□□□□□ -0.63
TSPAN4-201ENST00000346501 TCL1AP56279 114 aa11.13□□□□□ -0.63
TSPAN4-201ENST00000346501 RNF212Q495C1 297 aa11.13□□□□□ -0.63
TSPAN4-201ENST00000346501 SUN5Q8TC36 379 aa11.13□□□□□ -0.63
TSPAN4-201ENST00000346501 NKX6-2Q9C056 277 aaPredicted RBP11.13□□□□□ -0.63
TSPAN4-201ENST00000346501 A0A1W2PRE2 83 aa11.12□□□□□ -0.63
TSPAN4-201ENST00000346501 PFDN1O60925 122 aa11.12□□□□□ -0.63
TSPAN4-201ENST00000346501 TCRAP04437 139 aa11.12□□□□□ -0.63
TSPAN4-201ENST00000346501 PPT1P50897 306 aa11.12□□□□□ -0.63
TSPAN4-201ENST00000346501 GNG5P63218 68 aa11.12□□□□□ -0.63
TSPAN4-201ENST00000346501 MUC21Q5SSG8 566 aa11.12□□□□□ -0.63
TSPAN4-201ENST00000346501 PRR9Q5T870 116 aa11.12□□□□□ -0.63
TSPAN4-201ENST00000346501 Q6AWC8 147 aa11.12□□□□□ -0.63
TSPAN4-201ENST00000346501 LINC00612Q8N6U2 182 aa11.12□□□□□ -0.63
TSPAN4-201ENST00000346501 ZNF471Q9BX82 626 aaPredicted RBP11.12□□□□□ -0.63
TSPAN4-201ENST00000346501 NAGKQ9UJ70 344 aa11.12□□□□□ -0.63
TSPAN4-201ENST00000346501 EPDR1Q9UM22 224 aa11.12□□□□□ -0.63
TSPAN4-201ENST00000346501 SACSQ9NZJ4 4579 aa11.12□□□□□ -0.63
TSPAN4-201ENST00000346501 ALMS1Q8TCU4 4167 aa11.11□□□□□ -0.63
TSPAN4-201ENST00000346501 CCL18P55774 89 aa11.11□□□□□ -0.63
TSPAN4-201ENST00000346501 FAM3BP58499 235 aaPredicted RBP11.11□□□□□ -0.63
TSPAN4-201ENST00000346501 LGALS9BQ3B8N2 356 aa11.11□□□□□ -0.63
TSPAN4-201ENST00000346501 Q6ZTI0 123 aa11.11□□□□□ -0.63
TSPAN4-201ENST00000346501 CYB561D1Q8N8Q1 229 aa11.11□□□□□ -0.63
TSPAN4-201ENST00000346501 C11orf72Q8NBR9 251 aa11.11□□□□□ -0.63
TSPAN4-201ENST00000346501 KCNS1Q96KK3 526 aa11.11□□□□□ -0.63
TSPAN4-201ENST00000346501 MAP1LC3B2A6NCE7 125 aa11.1□□□□□ -0.63
TSPAN4-201ENST00000346501 UMAD1C9J7I0 102 aa11.1□□□□□ -0.63
TSPAN4-201ENST00000346501 F6UZH7 168 aa11.1□□□□□ -0.63
TSPAN4-201ENST00000346501 SEC11BP0C7V7 166 aa11.1□□□□□ -0.63
TSPAN4-201ENST00000346501 SAPCD1Q5SSQ6 148 aa11.1□□□□□ -0.63
TSPAN4-201ENST00000346501 SPXQ9BT56 116 aa11.1□□□□□ -0.63
TSPAN4-201ENST00000346501 MAP1LC3BQ9GZQ8 125 aa11.1□□□□□ -0.63
TSPAN4-201ENST00000346501 CYTL1Q9NRR1 136 aa11.1□□□□□ -0.63
TSPAN4-201ENST00000346501 TRAV8-1A0A0A6YYK1 113 aa11.09□□□□□ -0.63
TSPAN4-201ENST00000346501 BCL2L11O43521 198 aa11.09□□□□□ -0.63
TSPAN4-201ENST00000346501 FLI1Q01543 452 aaPredicted RBP11.09□□□□□ -0.63
TSPAN4-201ENST00000346501 TMEM183BQ1AE95 376 aa11.09□□□□□ -0.63
TSPAN4-201ENST00000346501 SSX7Q7RTT5 188 aa11.09□□□□□ -0.63
TSPAN4-201ENST00000346501 TMEM183AQ8IXX5 376 aa11.09□□□□□ -0.63
TSPAN4-201ENST00000346501 C18orf15Q96N68 181 aa11.09□□□□□ -0.63
TSPAN4-201ENST00000346501 SDF2L1Q9HCN8 221 aa11.09□□□□□ -0.63
TSPAN4-201ENST00000346501 PSG8Q9UQ74 426 aa11.09□□□□□ -0.63
TSPAN4-201ENST00000346501 KLF12Q9Y4X4 402 aa11.09□□□□□ -0.63
TSPAN4-201ENST00000346501 TRAV26-1A0A087WT03 109 aa11.08□□□□□ -0.64
TSPAN4-201ENST00000346501 GGTLC3B5MD39 225 aa11.08□□□□□ -0.64
TSPAN4-201ENST00000346501 SPINK4O60575 86 aa11.08□□□□□ -0.64
TSPAN4-201ENST00000346501 FGF8P55075 233 aaPredicted RBP11.08□□□□□ -0.64
TSPAN4-201ENST00000346501 UBE2G2P60604 165 aa11.08□□□□□ -0.64
TSPAN4-201ENST00000346501 SLAQ13239 276 aa11.08□□□□□ -0.64
TSPAN4-201ENST00000346501 SMUG1Q53HV7 270 aa11.08□□□□□ -0.64
TSPAN4-201ENST00000346501 TMEM75Q8N9X5 138 aa11.08□□□□□ -0.64
TSPAN4-201ENST00000346501 TMPRSS5Q9H3S3 457 aa11.08□□□□□ -0.64
TSPAN4-201ENST00000346501 TP53TG3Q9ULZ0 132 aa11.08□□□□□ -0.64
TSPAN4-201ENST00000346501 DNAH1Q9P2D7 4330 aa11.08□□□□□ -0.64
TSPAN4-201ENST00000346501 H3BNG1 76 aa11.07□□□□□ -0.64
TSPAN4-201ENST00000346501 TPT1P13693 172 aaKnown RBP11.07□□□□□ -0.64
TSPAN4-201ENST00000346501 ZNF726P1Q15940 193 aa11.07□□□□□ -0.64
TSPAN4-201ENST00000346501 TDRG1Q3Y452 100 aa11.07□□□□□ -0.64
TSPAN4-201ENST00000346501 EIF5AL1Q6IS14 154 aaKnown RBP11.07□□□□□ -0.64
TSPAN4-201ENST00000346501 PRNTQ86SH4 94 aa11.07□□□□□ -0.64
TSPAN4-201ENST00000346501 HIST1H2BAQ96A08 127 aa11.07□□□□□ -0.64
TSPAN4-201ENST00000346501 SGK494Q96LW2 274 aa11.07□□□□□ -0.64
TSPAN4-201ENST00000346501 MRPL16Q9NX20 251 aaKnown RBP11.07□□□□□ -0.64
TSPAN4-201ENST00000346501 A0A0J9YY99 117 aa11.06□□□□□ -0.64
TSPAN4-201ENST00000346501 CST9LP1Q5W188 147 aa11.06□□□□□ -0.64
TSPAN4-201ENST00000346501 DPPA3Q6W0C5 159 aa11.06□□□□□ -0.64
TSPAN4-201ENST00000346501 OR11H4Q8NGC9 324 aa11.06□□□□□ -0.64
TSPAN4-201ENST00000346501 FAM213BQ8TBF2 198 aa11.06□□□□□ -0.64
TSPAN4-201ENST00000346501 TCEAL7Q9BRU2 100 aa11.06□□□□□ -0.64
TSPAN4-201ENST00000346501 PLECQ15149 4684 aaKnown RBP11.05□□□□□ -0.64
TSPAN4-201ENST00000346501 PEX7O00628 323 aa11.05□□□□□ -0.64
TSPAN4-201ENST00000346501 GCGP01275 180 aa11.05□□□□□ -0.64
TSPAN4-201ENST00000346501 UBE2G1P62253 170 aa11.05□□□□□ -0.64
TSPAN4-201ENST00000346501 SOHLH1Q5JUK2 328 aa11.05□□□□□ -0.64
TSPAN4-201ENST00000346501 Q6ZQT7 251 aa11.05□□□□□ -0.64
TSPAN4-201ENST00000346501 TMUB2Q71RG4 321 aa11.05□□□□□ -0.64
TSPAN4-201ENST00000346501 SFT2D1Q8WV19 159 aa11.05□□□□□ -0.64
TSPAN4-201ENST00000346501 TRGV4A0A0C4DH28 118 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms