RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 LINC00322Q6ZN03 302 aaPredicted RBP10.12□□□□□ -0.79
HERPUD1-202ENST00000344114 TCF24Q7RTU0 167 aa10.12□□□□□ -0.79
HERPUD1-202ENST00000344114 KLHL30-AS1Q8NEE0 82 aa10.12□□□□□ -0.79
HERPUD1-202ENST00000344114 ASCL2Q99929 193 aa10.12□□□□□ -0.79
HERPUD1-202ENST00000344114 VGLL1Q99990 258 aa10.12□□□□□ -0.79
HERPUD1-202ENST00000344114 PPP1R14DQ9NXH3 145 aa10.12□□□□□ -0.79
HERPUD1-202ENST00000344114 NAT8BQ9UHF3 227 aa10.12□□□□□ -0.79
HERPUD1-202ENST00000344114 OVOL1O14753 267 aa10.11□□□□□ -0.79
HERPUD1-202ENST00000344114 PHOX2AO14813 284 aa10.11□□□□□ -0.79
HERPUD1-202ENST00000344114 RPL11P62913 178 aaKnown RBP10.11□□□□□ -0.79
HERPUD1-202ENST00000344114 KLF5Q13887 457 aaPredicted RBP10.11□□□□□ -0.79
HERPUD1-202ENST00000344114 TMEM78Q5T7P6 136 aa10.11□□□□□ -0.79
HERPUD1-202ENST00000344114 WDR73Q6P4I2 378 aa10.11□□□□□ -0.79
HERPUD1-202ENST00000344114 RASL11AQ6T310 242 aa10.11□□□□□ -0.79
HERPUD1-202ENST00000344114 C9orf47Q6ZRZ4 202 aa10.11□□□□□ -0.79
HERPUD1-202ENST00000344114 ZNF738Q8NE65 137 aa10.11□□□□□ -0.79
HERPUD1-202ENST00000344114 C8orf49Q96NF6 230 aa10.11□□□□□ -0.79
HERPUD1-202ENST00000344114 HUWE1Q7Z6Z7 4374 aaKnown RBP10.1□□□□□ -0.79
HERPUD1-202ENST00000344114 LCE6AA0A183 80 aa10.1□□□□□ -0.79
HERPUD1-202ENST00000344114 C2orf70A6NJV1 201 aa10.1□□□□□ -0.79
HERPUD1-202ENST00000344114 PRAC2D3DTV9 90 aa10.1□□□□□ -0.79
HERPUD1-202ENST00000344114 CA1P00915 261 aaPredicted RBP10.1□□□□□ -0.79
HERPUD1-202ENST00000344114 MT-ND6P03923 174 aa10.1□□□□□ -0.79
HERPUD1-202ENST00000344114 ID1P41134 155 aa10.1□□□□□ -0.79
HERPUD1-202ENST00000344114 TCL1AP56279 114 aa10.1□□□□□ -0.79
HERPUD1-202ENST00000344114 SMUG1Q53HV7 270 aa10.1□□□□□ -0.79
HERPUD1-202ENST00000344114 FAM162BQ5T6X4 162 aa10.1□□□□□ -0.79
HERPUD1-202ENST00000344114 C9orf66Q5T8R8 295 aa10.1□□□□□ -0.79
HERPUD1-202ENST00000344114 Q8TAT8 98 aa10.1□□□□□ -0.79
HERPUD1-202ENST00000344114 FRZBQ92765 325 aa10.1□□□□□ -0.79
HERPUD1-202ENST00000344114 RAX2Q96IS3 184 aa10.1□□□□□ -0.79
HERPUD1-202ENST00000344114 NEU1Q99519 415 aa10.1□□□□□ -0.79
HERPUD1-202ENST00000344114 PEMTQ9UBM1 199 aa10.1□□□□□ -0.79
HERPUD1-202ENST00000344114 LENEPQ9Y5L5 61 aa10.1□□□□□ -0.79
HERPUD1-202ENST00000344114 TRAPPC1Q9Y5R8 145 aa10.1□□□□□ -0.79
HERPUD1-202ENST00000344114 AGRNO00468 2067 aa10.09□□□□□ -0.79
HERPUD1-202ENST00000344114 CSMD3Q7Z407 3707 aa10.09□□□□□ -0.79
HERPUD1-202ENST00000344114 HIST1H2BKO60814 126 aa10.09□□□□□ -0.79
HERPUD1-202ENST00000344114 HIST1H2BJP06899 126 aa10.09□□□□□ -0.79
HERPUD1-202ENST00000344114 TRGC1P0CF51 173 aa10.09□□□□□ -0.79
HERPUD1-202ENST00000344114 EDN2P20800 178 aa10.09□□□□□ -0.79
HERPUD1-202ENST00000344114 HIST1H2BOP23527 126 aa10.09□□□□□ -0.79
HERPUD1-202ENST00000344114 HIST1H2BBP33778 126 aa10.09□□□□□ -0.79
HERPUD1-202ENST00000344114 ZNF138P52744 262 aa10.09□□□□□ -0.79
HERPUD1-202ENST00000344114 SLURP1P55000 103 aa10.09□□□□□ -0.79
HERPUD1-202ENST00000344114 HIST1H2BDP58876 126 aa10.09□□□□□ -0.79
HERPUD1-202ENST00000344114 HIST1H2BCP62807 126 aa10.09□□□□□ -0.79
HERPUD1-202ENST00000344114 HIST2H2BEQ16778 126 aa10.09□□□□□ -0.79
HERPUD1-202ENST00000344114 DEFB136Q30KP8 78 aa10.09□□□□□ -0.79
HERPUD1-202ENST00000344114 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.09□□□□□ -0.79
HERPUD1-202ENST00000344114 ATP5L2Q7Z4Y8 100 aa10.09□□□□□ -0.79
HERPUD1-202ENST00000344114 OR11H1Q8NG94 326 aa10.09□□□□□ -0.79
HERPUD1-202ENST00000344114 OR2D3Q8NGH3 330 aa10.09□□□□□ -0.79
HERPUD1-202ENST00000344114 OR1N2Q8NGR9 330 aa10.09□□□□□ -0.79
HERPUD1-202ENST00000344114 HIST1H2BHQ93079 126 aa10.09□□□□□ -0.79
HERPUD1-202ENST00000344114 C20orf173Q96LM9 149 aa10.09□□□□□ -0.79
HERPUD1-202ENST00000344114 DUX3Q96PT4 197 aa10.09□□□□□ -0.79
HERPUD1-202ENST00000344114 HIST1H2BNQ99877 126 aa10.09□□□□□ -0.79
HERPUD1-202ENST00000344114 HIST1H2BMQ99879 126 aa10.09□□□□□ -0.79
HERPUD1-202ENST00000344114 GNB1LQ9BYB4 327 aa10.09□□□□□ -0.79
HERPUD1-202ENST00000344114 SAV1Q9H4B6 383 aaPredicted RBP10.09□□□□□ -0.79
HERPUD1-202ENST00000344114 DNAH1Q9P2D7 4330 aa10.08□□□□□ -0.8
HERPUD1-202ENST00000344114 XKRY2A2RUG3 117 aa10.08□□□□□ -0.8
HERPUD1-202ENST00000344114 C5orf52A6NGY3 159 aa10.08□□□□□ -0.8
HERPUD1-202ENST00000344114 HIGD1CA8MV81 97 aa10.08□□□□□ -0.8
HERPUD1-202ENST00000344114 CCL24O00175 119 aa10.08□□□□□ -0.8
HERPUD1-202ENST00000344114 SH2D1AO60880 128 aa10.08□□□□□ -0.8
HERPUD1-202ENST00000344114 PRB4P10163 310 aaPredicted RBP10.08□□□□□ -0.8
HERPUD1-202ENST00000344114 CBLN1P23435 193 aa10.08□□□□□ -0.8
HERPUD1-202ENST00000344114 ERCC8Q13216 396 aa10.08□□□□□ -0.8
HERPUD1-202ENST00000344114 Q6AWC8 147 aa10.08□□□□□ -0.8
HERPUD1-202ENST00000344114 NUP35Q8NFH5 326 aa10.08□□□□□ -0.8
HERPUD1-202ENST00000344114 OR10J6PQ8NGY7 276 aa10.08□□□□□ -0.8
HERPUD1-202ENST00000344114 DCANP1Q8TF63 244 aa10.08□□□□□ -0.8
HERPUD1-202ENST00000344114 AGPAT4-IT1Q9H0P7 198 aa10.08□□□□□ -0.8
HERPUD1-202ENST00000344114 STARD9Q9P2P6 4700 aa10.07□□□□□ -0.8
HERPUD1-202ENST00000344114 HLA-DQA1P01909 254 aa10.07□□□□□ -0.8
HERPUD1-202ENST00000344114 CRIP1P50238 77 aa10.07□□□□□ -0.8
HERPUD1-202ENST00000344114 RPS20P60866 119 aaKnown RBP10.07□□□□□ -0.8
HERPUD1-202ENST00000344114 FABP9Q0Z7S8 132 aa10.07□□□□□ -0.8
HERPUD1-202ENST00000344114 MRPL54Q6P161 138 aaKnown RBP10.07□□□□□ -0.8
HERPUD1-202ENST00000344114 RBPMS2Q6ZRY4 209 aaKnown RBP10.07□□□□□ -0.8
HERPUD1-202ENST00000344114 LINC00477Q96M19 166 aa10.07□□□□□ -0.8
HERPUD1-202ENST00000344114 RCHY1Q96PM5 261 aa10.07□□□□□ -0.8
HERPUD1-202ENST00000344114 SORL1Q92673 2214 aa10.07□□□□□ -0.8
HERPUD1-202ENST00000344114 SNURFLB1AK76 121 aa10.06□□□□□ -0.8
HERPUD1-202ENST00000344114 UBE2CO00762 179 aa10.06□□□□□ -0.8
HERPUD1-202ENST00000344114 SNRPEP62304 92 aaKnown RBP10.06□□□□□ -0.8
HERPUD1-202ENST00000344114 OR9G4Q8NGQ1 327 aa10.06□□□□□ -0.8
HERPUD1-202ENST00000344114 MRPL18Q9H0U6 180 aaKnown RBP10.06□□□□□ -0.8
HERPUD1-202ENST00000344114 MS4A6AQ9H2W1 248 aa10.06□□□□□ -0.8
HERPUD1-202ENST00000344114 ZNF256Q9Y2P7 627 aaPredicted RBP10.06□□□□□ -0.8
HERPUD1-202ENST00000344114 IGKV3-7A0A075B6H7 116 aa10.05□□□□□ -0.8
HERPUD1-202ENST00000344114 TRBV7-9A0A0J9YWB2 115 aa10.05□□□□□ -0.8
HERPUD1-202ENST00000344114 TMEM189A5PLL7 270 aa10.05□□□□□ -0.8
HERPUD1-202ENST00000344114 FABP5P3A8MUU1 101 aa10.05□□□□□ -0.8
HERPUD1-202ENST00000344114 K7EQG2 157 aa10.05□□□□□ -0.8
HERPUD1-202ENST00000344114 FOXA3P55318 350 aaPredicted RBP10.05□□□□□ -0.8
HERPUD1-202ENST00000344114 FHL3Q13643 280 aa10.05□□□□□ -0.8
HERPUD1-202ENST00000344114 TMEM136Q6ZRR5 245 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms