RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 IGKV2-40A0A087WW87 121 aaPredicted RBP5.35□□□□□ -1.55
NUP43-201ENST00000340413 IGKV2D-40P01614 121 aaPredicted RBP5.35□□□□□ -1.55
NUP43-201ENST00000340413 C18orf65Q6ZTR6 163 aa5.35□□□□□ -1.55
NUP43-201ENST00000340413 CBLN2Q8IUK8 224 aa5.35□□□□□ -1.55
NUP43-201ENST00000340413 VGLL1Q99990 258 aa5.35□□□□□ -1.55
NUP43-201ENST00000340413 MAP6D1Q9H9H5 199 aa5.35□□□□□ -1.55
NUP43-201ENST00000340413 IGHV3-35A0A0C4DH35 117 aa5.35□□□□□ -1.55
NUP43-201ENST00000340413 C1orf196B1AJZ1 125 aa5.35□□□□□ -1.55
NUP43-201ENST00000340413 KHDC1LQ5JSQ8 128 aa5.35□□□□□ -1.55
NUP43-201ENST00000340413 AMTNQ6UX39 209 aa5.35□□□□□ -1.55
NUP43-201ENST00000340413 PACRGQ96M98 296 aaPredicted RBP5.35□□□□□ -1.55
NUP43-201ENST00000340413 TRAV34A0A0B4J273 112 aa5.34□□□□□ -1.55
NUP43-201ENST00000340413 C7orf71A4D174 169 aa5.34□□□□□ -1.55
NUP43-201ENST00000340413 PF4P02776 101 aa5.34□□□□□ -1.55
NUP43-201ENST00000340413 COA6Q5JTJ3 125 aaKnown RBP5.34□□□□□ -1.55
NUP43-201ENST00000340413 A8MZ25 164 aa5.34□□□□□ -1.55
NUP43-201ENST00000340413 CIDEAO60543 219 aa5.34□□□□□ -1.55
NUP43-201ENST00000340413 ANXA2RQ3ZCQ2 193 aa5.34□□□□□ -1.55
NUP43-201ENST00000340413 C12orf54Q6X4T0 127 aa5.34□□□□□ -1.55
NUP43-201ENST00000340413 TMEM61Q8N0U2 210 aa5.34□□□□□ -1.55
NUP43-201ENST00000340413 LINC00479Q96M42 142 aa5.34□□□□□ -1.55
NUP43-201ENST00000340413 SCRT2Q9NQ03 307 aa5.34□□□□□ -1.55
NUP43-201ENST00000340413 LAMTOR2Q9Y2Q5 125 aa5.34□□□□□ -1.55
NUP43-201ENST00000340413 TRGV11A0A075B6L2 103 aa5.34□□□□□ -1.56
NUP43-201ENST00000340413 PRAC2D3DTV9 90 aa5.34□□□□□ -1.56
NUP43-201ENST00000340413 H3BMM0 161 aa5.34□□□□□ -1.56
NUP43-201ENST00000340413 PHOX2AO14813 284 aa5.34□□□□□ -1.56
NUP43-201ENST00000340413 CDKN1BP46527 198 aa5.34□□□□□ -1.56
NUP43-201ENST00000340413 CRIP1P50238 77 aa5.34□□□□□ -1.56
NUP43-201ENST00000340413 C1QTNF4Q9BXJ3 329 aa5.34□□□□□ -1.56
NUP43-201ENST00000340413 EDA2RQ9HAV5 297 aa5.34□□□□□ -1.56
NUP43-201ENST00000340413 CD300EQ496F6 205 aaPredicted RBP5.33□□□□□ -1.56
NUP43-201ENST00000340413 TRPT1Q86TN4 253 aaKnown RBP5.33□□□□□ -1.56
NUP43-201ENST00000340413 POM121L12Q8N7R1 296 aa5.33□□□□□ -1.56
NUP43-201ENST00000340413 IGHV3-66A0A0C4DH42 116 aa5.33□□□□□ -1.56
NUP43-201ENST00000340413 OR11H12B2RN74 326 aa5.33□□□□□ -1.56
NUP43-201ENST00000340413 H3BTX0 84 aa5.33□□□□□ -1.56
NUP43-201ENST00000340413 HBBP68871 147 aa5.33□□□□□ -1.56
NUP43-201ENST00000340413 DEFB125Q8N687 156 aa5.33□□□□□ -1.56
NUP43-201ENST00000340413 RNF182Q8N6D2 247 aa5.33□□□□□ -1.56
NUP43-201ENST00000340413 SVIPQ8NHG7 77 aa5.33□□□□□ -1.56
NUP43-201ENST00000340413 RPH3ALQ9UNE2 315 aa5.33□□□□□ -1.56
NUP43-201ENST00000340413 CSMD2Q7Z408 3487 aa5.33□□□□□ -1.56
NUP43-201ENST00000340413 DEFB136Q30KP8 78 aa5.33□□□□□ -1.56
NUP43-201ENST00000340413 FAM24BQ8N5W8 94 aa5.33□□□□□ -1.56
NUP43-201ENST00000340413 OR2D3Q8NGH3 330 aa5.33□□□□□ -1.56
NUP43-201ENST00000340413 RNASE7Q9H1E1 156 aaKnown RBP5.33□□□□□ -1.56
NUP43-201ENST00000340413 FLNAP21333 2647 aaKnown RBP5.33□□□□□ -1.56
NUP43-201ENST00000340413 A0A1B0GUT8 65 aa5.32□□□□□ -1.56
NUP43-201ENST00000340413 ZNF705FA8MVS1 300 aaPredicted RBP5.32□□□□□ -1.56
NUP43-201ENST00000340413 HLA-DMBP28068 263 aa5.32□□□□□ -1.56
NUP43-201ENST00000340413 NUTF2P61970 127 aaKnown RBP5.32□□□□□ -1.56
NUP43-201ENST00000340413 RPL11P62913 178 aaKnown RBP5.32□□□□□ -1.56
NUP43-201ENST00000340413 PSMG4Q5JS54 123 aa5.32□□□□□ -1.56
NUP43-201ENST00000340413 NUP35Q8NFH5 326 aa5.32□□□□□ -1.56
NUP43-201ENST00000340413 NEU1Q99519 415 aa5.32□□□□□ -1.56
NUP43-201ENST00000340413 KIR2DL5BA0A0G2JN68 375 aa5.32□□□□□ -1.56
NUP43-201ENST00000340413 KIR2DL5BA0A0G2JPC4 375 aa5.32□□□□□ -1.56
NUP43-201ENST00000340413 SCO1O75880 301 aa5.32□□□□□ -1.56
NUP43-201ENST00000340413 KRTAP21-3Q3LHN1 58 aa5.32□□□□□ -1.56
NUP43-201ENST00000340413 KIR2DL5AQ8N109 375 aa5.32□□□□□ -1.56
NUP43-201ENST00000340413 KIR2DL5BQ8NHK3 375 aa5.32□□□□□ -1.56
NUP43-201ENST00000340413 C8orf49Q96NF6 230 aa5.32□□□□□ -1.56
NUP43-201ENST00000340413 TRAV8-1A0A0A6YYK1 113 aa5.32□□□□□ -1.56
NUP43-201ENST00000340413 UBE2CO00762 179 aa5.32□□□□□ -1.56
NUP43-201ENST00000340413 ZNF324O75467 553 aaPredicted RBP5.32□□□□□ -1.56
NUP43-201ENST00000340413 OR10J3Q5JRS4 329 aa5.32□□□□□ -1.56
NUP43-201ENST00000340413 PRR31Q5SQ13 230 aa5.32□□□□□ -1.56
NUP43-201ENST00000340413 TMEM88Q6PEY1 159 aa5.32□□□□□ -1.56
NUP43-201ENST00000340413 GSN-AS1Q9NRJ2 163 aa5.32□□□□□ -1.56
NUP43-201ENST00000340413 IGHV3OR16-8A0A075B7F1 116 aa5.31□□□□□ -1.56
NUP43-201ENST00000340413 IGHV3-49A0A0A0MS15 119 aa5.31□□□□□ -1.56
NUP43-201ENST00000340413 PPBPP02775 128 aa5.31□□□□□ -1.56
NUP43-201ENST00000340413 ESDP10768 282 aa5.31□□□□□ -1.56
NUP43-201ENST00000340413 Q0VG73 95 aa5.31□□□□□ -1.56
NUP43-201ENST00000340413 KRTAP24-1Q3LI83 254 aa5.31□□□□□ -1.56
NUP43-201ENST00000340413 LINC00322Q6ZN03 302 aaPredicted RBP5.31□□□□□ -1.56
NUP43-201ENST00000340413 TMEM136Q6ZRR5 245 aa5.31□□□□□ -1.56
NUP43-201ENST00000340413 FER1L6-AS1Q8NA97 138 aa5.31□□□□□ -1.56
NUP43-201ENST00000340413 NHLRC2Q8NBF2 726 aa5.31□□□□□ -1.56
NUP43-201ENST00000340413 SPXQ9BT56 116 aa5.31□□□□□ -1.56
NUP43-201ENST00000340413 C19orf73Q9NVV2 129 aa5.31□□□□□ -1.56
NUP43-201ENST00000340413 CSMD1Q96PZ7 3565 aa5.31□□□□□ -1.56
NUP43-201ENST00000340413 SAP30O75446 220 aa5.31□□□□□ -1.56
NUP43-201ENST00000340413 INSP01308 110 aa5.31□□□□□ -1.56
NUP43-201ENST00000340413 GPX1P07203 203 aa5.31□□□□□ -1.56
NUP43-201ENST00000340413 EGFEM1PQ0D2K5 195 aa5.31□□□□□ -1.56
NUP43-201ENST00000340413 ERCC8Q13216 396 aa5.31□□□□□ -1.56
NUP43-201ENST00000340413 TMEM191AQ9H0A3 160 aa5.31□□□□□ -1.56
NUP43-201ENST00000340413 U3KQK5 164 aa5.31□□□□□ -1.56
NUP43-201ENST00000340413 TGIF2-C20orf24A0A0A6YYL0 155 aa5.31□□□□□ -1.56
NUP43-201ENST00000340413 HIGD1CA8MV81 97 aa5.31□□□□□ -1.56
NUP43-201ENST00000340413 PPP1R17O96001 155 aa5.31□□□□□ -1.56
NUP43-201ENST00000340413 ASIPP42127 132 aa5.31□□□□□ -1.56
NUP43-201ENST00000340413 NSUN5P1Q3KNT7 163 aa5.31□□□□□ -1.56
NUP43-201ENST00000340413 ODF3L2Q3SX64 289 aa5.31□□□□□ -1.56
NUP43-201ENST00000340413 C3orf56Q8N813 242 aa5.31□□□□□ -1.56
NUP43-201ENST00000340413 C9orf85Q96MD7 179 aa5.31□□□□□ -1.56
NUP43-201ENST00000340413 OTOGQ6ZRI0 2925 aa5.31□□□□□ -1.56
NUP43-201ENST00000340413 CELSR1Q9NYQ6 3014 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms