RNA–Protein interactions for RNA: ENST00000339497.7

CCNY-202, Transcript of cyclin Y, humanhuman

TSL 1 (best) BASIC

Gene CCNY, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNY-202ENST00000339497 SPOCK3Q9BQ16 436 aa12.63□□□□□ -0.39
CCNY-202ENST00000339497 KMT2EQ8IZD2 1858 aa12.63□□□□□ -0.39
CCNY-202ENST00000339497 DNAL4O96015 105 aa12.63□□□□□ -0.39
CCNY-202ENST00000339497 LINC01559Q495D7 138 aa12.63□□□□□ -0.39
CCNY-202ENST00000339497 C11orf1Q9H5F2 150 aa12.63□□□□□ -0.39
CCNY-202ENST00000339497 MRPL36Q9P0J6 103 aaKnown RBP12.63□□□□□ -0.39
CCNY-202ENST00000339497 USP9XQ93008 2570 aaPredicted RBP12.63□□□□□ -0.39
CCNY-202ENST00000339497 NDUFA4O00483 81 aa12.63□□□□□ -0.39
CCNY-202ENST00000339497 USP9YO00507 2555 aaPredicted RBP12.62□□□□□ -0.39
CCNY-202ENST00000339497 TRAV26-2A0A0B4J265 109 aa12.62□□□□□ -0.39
CCNY-202ENST00000339497 ZNF415Q09FC8 603 aa12.62□□□□□ -0.39
CCNY-202ENST00000339497 CDPF1Q6NVV7 123 aa12.62□□□□□ -0.39
CCNY-202ENST00000339497 C20orf144Q9BQM9 153 aa12.62□□□□□ -0.39
CCNY-202ENST00000339497 KLK9Q9UKQ9 250 aa12.62□□□□□ -0.39
CCNY-202ENST00000339497 ZNF479Q96JC4 524 aa12.62□□□□□ -0.39
CCNY-202ENST00000339497 TRAV12-2A0A075B6T6 113 aa12.62□□□□□ -0.39
CCNY-202ENST00000339497 IGLV1-47P01700 117 aa12.62□□□□□ -0.39
CCNY-202ENST00000339497 BRWD1-AS2P59051 145 aa12.62□□□□□ -0.39
CCNY-202ENST00000339497 MEGF9Q9H1U4 602 aa12.62□□□□□ -0.39
CCNY-202ENST00000339497 IGHV7-81A0A0B4J1V7 117 aa12.61□□□□□ -0.39
CCNY-202ENST00000339497 CENPVL3A0A0U1RRI6 287 aa12.61□□□□□ -0.39
CCNY-202ENST00000339497 I3L2K1 104 aa12.61□□□□□ -0.39
CCNY-202ENST00000339497 LTAP01374 205 aa12.61□□□□□ -0.39
CCNY-202ENST00000339497 PTPRSQ13332 1948 aa12.61□□□□□ -0.39
CCNY-202ENST00000339497 HOXA3O43365 443 aaPredicted RBP12.61□□□□□ -0.39
CCNY-202ENST00000339497 ANXA2RQ3ZCQ2 193 aa12.61□□□□□ -0.39
CCNY-202ENST00000339497 PHLDA1Q8WV24 401 aaPredicted RBP12.61□□□□□ -0.39
CCNY-202ENST00000339497 XCL2Q9UBD3 114 aa12.61□□□□□ -0.39
CCNY-202ENST00000339497 IGHV1-24A0A0C4DH33 117 aa12.61□□□□□ -0.39
CCNY-202ENST00000339497 PYGO2Q9BRQ0 406 aa12.61□□□□□ -0.39
CCNY-202ENST00000339497 F6UB75 175 aa12.6□□□□□ -0.39
CCNY-202ENST00000339497 DLEU1O43261 78 aa12.6□□□□□ -0.39
CCNY-202ENST00000339497 TCTEX1D4Q5JR98 221 aa12.6□□□□□ -0.39
CCNY-202ENST00000339497 SNHG12Q9BXW3 62 aa12.6□□□□□ -0.39
CCNY-202ENST00000339497 CEP192Q8TEP8 1941 aa12.6□□□□□ -0.39
CCNY-202ENST00000339497 DYNAPQ8N1N2 210 aa12.6□□□□□ -0.39
CCNY-202ENST00000339497 LINC01549A6NIU2 74 aa12.6□□□□□ -0.39
CCNY-202ENST00000339497 PLNP26678 52 aa12.6□□□□□ -0.39
CCNY-202ENST00000339497 NPYP01303 97 aa12.6□□□□□ -0.39
CCNY-202ENST00000339497 IGHV4-59P01825 116 aa12.6□□□□□ -0.39
CCNY-202ENST00000339497 FAM167A-AS1Q96KT0 104 aa12.6□□□□□ -0.39
CCNY-202ENST00000339497 SAMD5Q5TGI4 173 aa12.59□□□□□ -0.39
CCNY-202ENST00000339497 AGPAT4-IT1Q9H0P7 198 aa12.59□□□□□ -0.39
CCNY-202ENST00000339497 GP9P14770 177 aa12.59□□□□□ -0.39
CCNY-202ENST00000339497 RPL36AP83881 106 aaKnown RBP12.59□□□□□ -0.39
CCNY-202ENST00000339497 TMEM95Q3KNT9 176 aa12.59□□□□□ -0.39
CCNY-202ENST00000339497 RPL36ALQ969Q0 106 aaKnown RBP12.59□□□□□ -0.39
CCNY-202ENST00000339497 SIGLEC8Q9NYZ4 499 aa12.59□□□□□ -0.39
CCNY-202ENST00000339497 PRRC2CQ9Y520 2896 aaKnown RBP12.59□□□□□ -0.39
CCNY-202ENST00000339497 INSP01308 110 aa12.58□□□□□ -0.39
CCNY-202ENST00000339497 IGHV4-39P01824 125 aa12.58□□□□□ -0.39
CCNY-202ENST00000339497 IGLC2P0DOY2 106 aa12.58□□□□□ -0.39
CCNY-202ENST00000339497 IGLC3P0DOY3 106 aa12.58□□□□□ -0.39
CCNY-202ENST00000339497 PRB1P04280 392 aa12.58□□□□□ -0.4
CCNY-202ENST00000339497 IGLL1P15814 213 aa12.58□□□□□ -0.4
CCNY-202ENST00000339497 BLCAPP62952 87 aa12.58□□□□□ -0.4
CCNY-202ENST00000339497 IGHV4-30-2A0A087WSY4 118 aa12.58□□□□□ -0.4
CCNY-202ENST00000339497 ADARB2-AS1A8MUL3 147 aa12.58□□□□□ -0.4
CCNY-202ENST00000339497 IGLV2-23P01705 113 aa12.58□□□□□ -0.4
CCNY-202ENST00000339497 EGR2P11161 476 aaPredicted RBP12.58□□□□□ -0.4
CCNY-202ENST00000339497 DEFB112Q30KQ8 113 aa12.58□□□□□ -0.4
CCNY-202ENST00000339497 C2orf66Q6UXQ4 117 aa12.58□□□□□ -0.4
CCNY-202ENST00000339497 NRGNQ92686 78 aa12.58□□□□□ -0.4
CCNY-202ENST00000339497 C1orf159Q96HA4 380 aa12.58□□□□□ -0.4
CCNY-202ENST00000339497 CGB3P0DN86 165 aa12.58□□□□□ -0.4
CCNY-202ENST00000339497 CGB7P0DN87 165 aa12.58□□□□□ -0.4
CCNY-202ENST00000339497 IGHV4-38-2P0DP08 117 aa12.58□□□□□ -0.4
CCNY-202ENST00000339497 P0C879 139 aa12.57□□□□□ -0.4
CCNY-202ENST00000339497 NPC2P61916 151 aa12.57□□□□□ -0.4
CCNY-202ENST00000339497 DTX2Q86UW9 622 aa12.57□□□□□ -0.4
CCNY-202ENST00000339497 Q8N7P7 452 aa12.57□□□□□ -0.4
CCNY-202ENST00000339497 TRBV7-9A0A0J9YWB2 115 aa12.57□□□□□ -0.4
CCNY-202ENST00000339497 SPRY2O43597 315 aa12.57□□□□□ -0.4
CCNY-202ENST00000339497 ZFP36P26651 326 aaKnown RBP12.57□□□□□ -0.4
CCNY-202ENST00000339497 IGLV11-55A0A075B6I3 123 aa12.57□□□□□ -0.4
CCNY-202ENST00000339497 CTSGP08311 255 aa12.57□□□□□ -0.4
CCNY-202ENST00000339497 NEGR1Q7Z3B1 354 aa12.57□□□□□ -0.4
CCNY-202ENST00000339497 ZNF295-AS1Q8N0V1 137 aa12.57□□□□□ -0.4
CCNY-202ENST00000339497 NUPR1O60356 82 aa12.57□□□□□ -0.4
CCNY-202ENST00000339497 TEX43Q6ZNM6 134 aa12.57□□□□□ -0.4
CCNY-202ENST00000339497 IGHV7-4-1A0A0J9YVY3 117 aa12.55□□□□□ -0.4
CCNY-202ENST00000339497 TEX22C9J3V5 150 aa12.55□□□□□ -0.4
CCNY-202ENST00000339497 FOXE3Q13461 319 aa12.55□□□□□ -0.4
CCNY-202ENST00000339497 ZNF124Q15973 351 aa12.55□□□□□ -0.4
CCNY-202ENST00000339497 NPBQ8NG41 125 aa12.55□□□□□ -0.4
CCNY-202ENST00000339497 TP53TG1Q9Y2A0 90 aa12.55□□□□□ -0.4
CCNY-202ENST00000339497 Q8N9W7 124 aa12.55□□□□□ -0.4
CCNY-202ENST00000339497 IGHV3-16A0A0C4DH30 117 aa12.55□□□□□ -0.4
CCNY-202ENST00000339497 KIR3DS1Q14943 382 aa12.55□□□□□ -0.4
CCNY-202ENST00000339497 MRPS16Q9Y3D3 137 aaKnown RBP12.55□□□□□ -0.4
CCNY-202ENST00000339497 C1orf229Q6ZS94 237 aaPredicted RBP12.55□□□□□ -0.4
CCNY-202ENST00000339497 Q8N8P6 123 aa12.55□□□□□ -0.4
CCNY-202ENST00000339497 LINC01619G3V211 115 aa12.54□□□□□ -0.4
CCNY-202ENST00000339497 NUP210LQ5VU65 1888 aa12.54□□□□□ -0.4
CCNY-202ENST00000339497 DEFB130BP0DP73 79 aa12.54□□□□□ -0.4
CCNY-202ENST00000339497 DEFB130AP0DP74 79 aa12.54□□□□□ -0.4
CCNY-202ENST00000339497 CFAP161Q6P656 301 aa12.54□□□□□ -0.4
CCNY-202ENST00000339497 SPXQ9BT56 116 aa12.54□□□□□ -0.4
CCNY-202ENST00000339497 TRAV13-1A0A0B4J241 112 aa12.54□□□□□ -0.4
CCNY-202ENST00000339497 SDHAF1A6NFY7 115 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms