RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 SNURFLB1AK76 121 aa10.71□□□□□ -0.69
PRKN-201ENST00000338468 ATP5G1P05496 136 aa10.71□□□□□ -0.69
PRKN-201ENST00000338468 ATP5G3P48201 142 aa10.71□□□□□ -0.69
PRKN-201ENST00000338468 Q6ZTI0 123 aa10.71□□□□□ -0.69
PRKN-201ENST00000338468 KCNRGQ8N5I3 272 aa10.71□□□□□ -0.69
PRKN-201ENST00000338468 CMTM2Q8TAZ6 248 aa10.71□□□□□ -0.69
PRKN-201ENST00000338468 ST6GAL2Q96JF0 529 aa10.71□□□□□ -0.69
PRKN-201ENST00000338468 LENEPQ9Y5L5 61 aa10.71□□□□□ -0.69
PRKN-201ENST00000338468 IGHV1OR15-1A0A075B7D0 117 aa10.7□□□□□ -0.7
PRKN-201ENST00000338468 GAGE12BA1L429 117 aa10.7□□□□□ -0.7
PRKN-201ENST00000338468 GGTLC3B5MD39 225 aa10.7□□□□□ -0.7
PRKN-201ENST00000338468 F5H768 121 aa10.7□□□□□ -0.7
PRKN-201ENST00000338468 GAGE7O76087 117 aa10.7□□□□□ -0.7
PRKN-201ENST00000338468 CXorf1O96002 111 aa10.7□□□□□ -0.7
PRKN-201ENST00000338468 GAGE12FP0CL80 117 aa10.7□□□□□ -0.7
PRKN-201ENST00000338468 GAGE12GP0CL81 117 aa10.7□□□□□ -0.7
PRKN-201ENST00000338468 GAGE12IP0CL82 117 aa10.7□□□□□ -0.7
PRKN-201ENST00000338468 P0DMU3 169 aa10.7□□□□□ -0.7
PRKN-201ENST00000338468 FAM231AP0DMU4 169 aa10.7□□□□□ -0.7
PRKN-201ENST00000338468 FAM231CP0DMU5 169 aa10.7□□□□□ -0.7
PRKN-201ENST00000338468 ZNF345Q14585 488 aa10.7□□□□□ -0.7
PRKN-201ENST00000338468 FAM74A1Q5RGS3 127 aa10.7□□□□□ -0.7
PRKN-201ENST00000338468 Q6AWC8 147 aa10.7□□□□□ -0.7
PRKN-201ENST00000338468 POM121L12Q8N7R1 296 aa10.7□□□□□ -0.7
PRKN-201ENST00000338468 ZNF680Q8NEM1 530 aa10.7□□□□□ -0.7
PRKN-201ENST00000338468 KLF12Q9Y4X4 402 aa10.7□□□□□ -0.7
PRKN-201ENST00000338468 DNAH17Q9UFH2 4485 aa10.69□□□□□ -0.7
PRKN-201ENST00000338468 HMSDA8MTL9 139 aa10.69□□□□□ -0.7
PRKN-201ENST00000338468 TCL1AP56279 114 aa10.69□□□□□ -0.7
PRKN-201ENST00000338468 TMPRSS5Q9H3S3 457 aa10.69□□□□□ -0.7
PRKN-201ENST00000338468 TMEM167BQ9NRX6 74 aa10.69□□□□□ -0.7
PRKN-201ENST00000338468 FAT2Q9NYQ8 4349 aa10.68□□□□□ -0.7
PRKN-201ENST00000338468 CTXND1A0A1B0GTU2 59 aa10.68□□□□□ -0.7
PRKN-201ENST00000338468 RGS13O14921 159 aa10.68□□□□□ -0.7
PRKN-201ENST00000338468 TCRAP04437 139 aa10.68□□□□□ -0.7
PRKN-201ENST00000338468 HOXA5P20719 270 aa10.68□□□□□ -0.7
PRKN-201ENST00000338468 IBA57Q5T440 356 aaKnown RBP10.68□□□□□ -0.7
PRKN-201ENST00000338468 C5orf17Q8NAS9 161 aa10.68□□□□□ -0.7
PRKN-201ENST00000338468 ARPC5LQ9BPX5 153 aa10.68□□□□□ -0.7
PRKN-201ENST00000338468 SPINK4O60575 86 aa10.67□□□□□ -0.7
PRKN-201ENST00000338468 IGLV2-11P01706 119 aa10.67□□□□□ -0.7
PRKN-201ENST00000338468 SUMO1P63165 101 aaKnown RBP10.67□□□□□ -0.7
PRKN-201ENST00000338468 MUC21Q5SSG8 566 aa10.67□□□□□ -0.7
PRKN-201ENST00000338468 AKR1C8PQ5T2L2 129 aa10.67□□□□□ -0.7
PRKN-201ENST00000338468 C15orf53Q8NAA6 179 aa10.67□□□□□ -0.7
PRKN-201ENST00000338468 SGK494Q96LW2 274 aa10.67□□□□□ -0.7
PRKN-201ENST00000338468 EPDR1Q9UM22 224 aa10.67□□□□□ -0.7
PRKN-201ENST00000338468 F6UZH7 168 aa10.66□□□□□ -0.7
PRKN-201ENST00000338468 FGF8P55075 233 aaPredicted RBP10.66□□□□□ -0.7
PRKN-201ENST00000338468 C18orf15Q96N68 181 aa10.66□□□□□ -0.7
PRKN-201ENST00000338468 MDFICQ9P1T7 246 aa10.66□□□□□ -0.7
PRKN-201ENST00000338468 TRGV1A0A0A0MS02 117 aa10.65□□□□□ -0.7
PRKN-201ENST00000338468 SERTM2A0A1B0GWG4 89 aa10.65□□□□□ -0.7
PRKN-201ENST00000338468 A0A1W2PRE2 83 aa10.65□□□□□ -0.7
PRKN-201ENST00000338468 FHITP49789 147 aa10.65□□□□□ -0.7
PRKN-201ENST00000338468 TDRG1Q3Y452 100 aa10.65□□□□□ -0.7
PRKN-201ENST00000338468 IQCF2Q8IXL9 164 aa10.65□□□□□ -0.7
PRKN-201ENST00000338468 TREM1Q9NP99 234 aa10.65□□□□□ -0.7
PRKN-201ENST00000338468 NACAE9PAV3 2078 aa10.65□□□□□ -0.7
PRKN-201ENST00000338468 TRAV26-1A0A087WT03 109 aa10.64□□□□□ -0.71
PRKN-201ENST00000338468 A0A0D9SG52 128 aa10.64□□□□□ -0.71
PRKN-201ENST00000338468 BCL2L11O43521 198 aa10.64□□□□□ -0.71
PRKN-201ENST00000338468 OR5I1Q13606 314 aa10.64□□□□□ -0.71
PRKN-201ENST00000338468 RNF212Q495C1 297 aa10.64□□□□□ -0.71
PRKN-201ENST00000338468 C8orf49Q96NF6 230 aa10.64□□□□□ -0.71
PRKN-201ENST00000338468 MRPL16Q9NX20 251 aaKnown RBP10.64□□□□□ -0.71
PRKN-201ENST00000338468 PSG8Q9UQ74 426 aa10.64□□□□□ -0.71
PRKN-201ENST00000338468 MAP1LC3B2A6NCE7 125 aa10.63□□□□□ -0.71
PRKN-201ENST00000338468 FAM74A7A6NL05 159 aa10.63□□□□□ -0.71
PRKN-201ENST00000338468 NUDT3O95989 172 aa10.63□□□□□ -0.71
PRKN-201ENST00000338468 SEC11BP0C7V7 166 aa10.63□□□□□ -0.71
PRKN-201ENST00000338468 ZNF80P51504 273 aaPredicted RBP10.63□□□□□ -0.71
PRKN-201ENST00000338468 UBE2G2P60604 165 aa10.63□□□□□ -0.71
PRKN-201ENST00000338468 ZNF415Q09FC8 603 aa10.63□□□□□ -0.71
PRKN-201ENST00000338468 TMEM183BQ1AE95 376 aa10.63□□□□□ -0.71
PRKN-201ENST00000338468 LGALS9BQ3B8N2 356 aa10.63□□□□□ -0.71
PRKN-201ENST00000338468 Q6ZNX1 250 aa10.63□□□□□ -0.71
PRKN-201ENST00000338468 LINC00336Q6ZUF6 198 aa10.63□□□□□ -0.71
PRKN-201ENST00000338468 UBE2DNLQ8IWF7 75 aa10.63□□□□□ -0.71
PRKN-201ENST00000338468 TMEM183AQ8IXX5 376 aa10.63□□□□□ -0.71
PRKN-201ENST00000338468 CYB561D1Q8N8Q1 229 aa10.63□□□□□ -0.71
PRKN-201ENST00000338468 LINC00479Q96M42 142 aa10.63□□□□□ -0.71
PRKN-201ENST00000338468 ATG101Q9BSB4 218 aa10.63□□□□□ -0.71
PRKN-201ENST00000338468 MAP1LC3BQ9GZQ8 125 aa10.63□□□□□ -0.71
PRKN-201ENST00000338468 C11orf21Q9P2W6 132 aa10.63□□□□□ -0.71
PRKN-201ENST00000338468 TRGV2A0A075B6R0 118 aa10.62□□□□□ -0.71
PRKN-201ENST00000338468 TRAV21A0A0B4J279 112 aa10.62□□□□□ -0.71
PRKN-201ENST00000338468 A0A0J9YY99 117 aa10.62□□□□□ -0.71
PRKN-201ENST00000338468 GNRH2O43555 120 aa10.62□□□□□ -0.71
PRKN-201ENST00000338468 MED14OSP0DP75 135 aa10.62□□□□□ -0.71
PRKN-201ENST00000338468 FLI1Q01543 452 aaPredicted RBP10.62□□□□□ -0.71
PRKN-201ENST00000338468 FAM159AQ6UWV7 190 aa10.62□□□□□ -0.71
PRKN-201ENST00000338468 TMUB2Q71RG4 321 aa10.62□□□□□ -0.71
PRKN-201ENST00000338468 TMEM75Q8N9X5 138 aa10.62□□□□□ -0.71
PRKN-201ENST00000338468 VSIG2Q96IQ7 327 aa10.62□□□□□ -0.71
PRKN-201ENST00000338468 ZNF471Q9BX82 626 aaPredicted RBP10.62□□□□□ -0.71
PRKN-201ENST00000338468 NAGKQ9UJ70 344 aa10.62□□□□□ -0.71
PRKN-201ENST00000338468 MUC4Q99102 2169 aa10.62□□□□□ -0.71
PRKN-201ENST00000338468 PKHD1P08F94 4074 aa10.61□□□□□ -0.71
PRKN-201ENST00000338468 TRAV34A0A0B4J273 112 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms