RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 OR11H12B2RN74 326 aa7.25□□□□□ -1.25
SYN3-201ENST00000332840 GATCO43716 136 aaKnown RBP7.25□□□□□ -1.25
SYN3-201ENST00000332840 ID1P41134 155 aa7.25□□□□□ -1.25
SYN3-201ENST00000332840 SAPCD1Q5SSQ6 148 aa7.25□□□□□ -1.25
SYN3-201ENST00000332840 DAZAP1Q96EP5 407 aaKnown RBP7.25□□□□□ -1.25
SYN3-201ENST00000332840 RNASE7Q9H1E1 156 aaKnown RBP7.25□□□□□ -1.25
SYN3-201ENST00000332840 IL36BQ9NZH7 164 aa7.25□□□□□ -1.25
SYN3-201ENST00000332840 TMA7Q9Y2S6 64 aaKnown RBP7.25□□□□□ -1.25
SYN3-201ENST00000332840 V9GYV3 84 aa7.25□□□□□ -1.25
SYN3-201ENST00000332840 DYNC2H1Q8NCM8 4307 aaKnown RBP7.24□□□□□ -1.25
SYN3-201ENST00000332840 TRAV9-1A0A075B6T8 112 aa7.24□□□□□ -1.25
SYN3-201ENST00000332840 IGKV2-40A0A087WW87 121 aaPredicted RBP7.24□□□□□ -1.25
SYN3-201ENST00000332840 ZNF705GA8MUZ8 300 aaPredicted RBP7.24□□□□□ -1.25
SYN3-201ENST00000332840 SOCS3O14543 225 aa7.24□□□□□ -1.25
SYN3-201ENST00000332840 IGKV2D-40P01614 121 aaPredicted RBP7.24□□□□□ -1.25
SYN3-201ENST00000332840 CD7P09564 240 aa7.24□□□□□ -1.25
SYN3-201ENST00000332840 RAB5AP20339 215 aa7.24□□□□□ -1.25
SYN3-201ENST00000332840 CMC4P56277 68 aaPredicted RBP7.24□□□□□ -1.25
SYN3-201ENST00000332840 PRR27Q6MZM9 219 aa7.24□□□□□ -1.25
SYN3-201ENST00000332840 GBGT1Q8N5D6 347 aa7.24□□□□□ -1.25
SYN3-201ENST00000332840 RNF182Q8N6D2 247 aa7.24□□□□□ -1.25
SYN3-201ENST00000332840 NUDT10Q8NFP7 164 aa7.24□□□□□ -1.25
SYN3-201ENST00000332840 NUDT11Q96G61 164 aa7.24□□□□□ -1.25
SYN3-201ENST00000332840 FAM210BQ96KR6 192 aa7.24□□□□□ -1.25
SYN3-201ENST00000332840 FAM110AQ9BQ89 295 aa7.24□□□□□ -1.25
SYN3-201ENST00000332840 PYGO2Q9BRQ0 406 aa7.24□□□□□ -1.25
SYN3-201ENST00000332840 NDFIP1Q9BT67 221 aa7.24□□□□□ -1.25
SYN3-201ENST00000332840 EPPK1P58107 5090 aaKnown RBP7.24□□□□□ -1.25
SYN3-201ENST00000332840 SORL1Q92673 2214 aa7.23□□□□□ -1.25
SYN3-201ENST00000332840 IGKV3-7A0A075B6H7 116 aa7.23□□□□□ -1.25
SYN3-201ENST00000332840 TGIF2-C20orf24A0A0A6YYL0 155 aa7.23□□□□□ -1.25
SYN3-201ENST00000332840 C19orf71A6NCJ1 209 aa7.23□□□□□ -1.25
SYN3-201ENST00000332840 PRAC2D3DTV9 90 aa7.23□□□□□ -1.25
SYN3-201ENST00000332840 CXCL1P09341 107 aa7.23□□□□□ -1.25
SYN3-201ENST00000332840 CT45A10P0DMU9 189 aa7.23□□□□□ -1.25
SYN3-201ENST00000332840 EDN2P20800 178 aa7.23□□□□□ -1.25
SYN3-201ENST00000332840 PAFAH1B2P68402 229 aa7.23□□□□□ -1.25
SYN3-201ENST00000332840 RPL19P84098 196 aaKnown RBP7.23□□□□□ -1.25
SYN3-201ENST00000332840 TMEM78Q5T7P6 136 aa7.23□□□□□ -1.25
SYN3-201ENST00000332840 COX8CQ7Z4L0 72 aa7.23□□□□□ -1.25
SYN3-201ENST00000332840 ZNF738Q8NE65 137 aa7.23□□□□□ -1.25
SYN3-201ENST00000332840 OR4B1Q8NGF8 309 aa7.23□□□□□ -1.25
SYN3-201ENST00000332840 VGLL1Q99990 258 aa7.23□□□□□ -1.25
SYN3-201ENST00000332840 SRD5A3Q9H8P0 318 aa7.23□□□□□ -1.25
SYN3-201ENST00000332840 PPP1R14DQ9NXH3 145 aa7.23□□□□□ -1.25
SYN3-201ENST00000332840 A0A1W2PPQ1 181 aa7.22□□□□□ -1.25
SYN3-201ENST00000332840 C1orf196B1AJZ1 125 aa7.22□□□□□ -1.25
SYN3-201ENST00000332840 C3orf84H3BNL1 204 aa7.22□□□□□ -1.25
SYN3-201ENST00000332840 P01737 135 aa7.22□□□□□ -1.25
SYN3-201ENST00000332840 RPS10P46783 165 aaKnown RBP7.22□□□□□ -1.25
SYN3-201ENST00000332840 ZNF138P52744 262 aa7.22□□□□□ -1.25
SYN3-201ENST00000332840 FAM3BP58499 235 aaPredicted RBP7.22□□□□□ -1.25
SYN3-201ENST00000332840 ERCC8Q13216 396 aa7.22□□□□□ -1.25
SYN3-201ENST00000332840 SMUG1Q53HV7 270 aa7.22□□□□□ -1.25
SYN3-201ENST00000332840 CT83Q5H943 113 aa7.22□□□□□ -1.25
SYN3-201ENST00000332840 LINC00322Q6ZN03 302 aaPredicted RBP7.22□□□□□ -1.25
SYN3-201ENST00000332840 C9orf47Q6ZRZ4 202 aa7.22□□□□□ -1.25
SYN3-201ENST00000332840 DEFB125Q8N687 156 aa7.22□□□□□ -1.25
SYN3-201ENST00000332840 OR10J6PQ8NGY7 276 aa7.22□□□□□ -1.25
SYN3-201ENST00000332840 ZC2HC1AQ96GY0 325 aa7.22□□□□□ -1.25
SYN3-201ENST00000332840 C20orf173Q96LM9 149 aa7.22□□□□□ -1.25
SYN3-201ENST00000332840 LINC00477Q96M19 166 aa7.22□□□□□ -1.25
SYN3-201ENST00000332840 MS4A6AQ9H2W1 248 aa7.22□□□□□ -1.25
SYN3-201ENST00000332840 LENEPQ9Y5L5 61 aa7.22□□□□□ -1.25
SYN3-201ENST00000332840 CSMD3Q7Z407 3707 aa7.21□□□□□ -1.25
SYN3-201ENST00000332840 LOC102724200A0A096LPH7 203 aaPredicted RBP7.21□□□□□ -1.26
SYN3-201ENST00000332840 TRAV2A0A0B4J234 112 aa7.21□□□□□ -1.26
SYN3-201ENST00000332840 SMIM27A0A1W2PRY6 76 aa7.21□□□□□ -1.26
SYN3-201ENST00000332840 A8MWL6 223 aa7.21□□□□□ -1.26
SYN3-201ENST00000332840 NPIPB6E9PJ23 425 aa7.21□□□□□ -1.26
SYN3-201ENST00000332840 K7EQG2 157 aa7.21□□□□□ -1.26
SYN3-201ENST00000332840 PRB4P10163 310 aaPredicted RBP7.21□□□□□ -1.26
SYN3-201ENST00000332840 APOC4P55056 127 aa7.21□□□□□ -1.26
SYN3-201ENST00000332840 RAB5BP61020 215 aa7.21□□□□□ -1.26
SYN3-201ENST00000332840 WFDC3Q8IUB2 231 aa7.21□□□□□ -1.26
SYN3-201ENST00000332840 DCANP1Q8TF63 244 aa7.21□□□□□ -1.26
SYN3-201ENST00000332840 C8orf49Q96NF6 230 aa7.21□□□□□ -1.26
SYN3-201ENST00000332840 AGPAT4-IT1Q9H0P7 198 aa7.21□□□□□ -1.26
SYN3-201ENST00000332840 RPP21Q9H633 154 aaKnown RBP7.21□□□□□ -1.26
SYN3-201ENST00000332840 UBE2CO00762 179 aa7.2□□□□□ -1.26
SYN3-201ENST00000332840 TYMSP04818 313 aa7.2□□□□□ -1.26
SYN3-201ENST00000332840 SNRPD3P62318 126 aaKnown RBP7.2□□□□□ -1.26
SYN3-201ENST00000332840 OR8A1Q8NGG7 326 aa7.2□□□□□ -1.26
SYN3-201ENST00000332840 MUC7Q8TAX7 377 aa7.2□□□□□ -1.26
SYN3-201ENST00000332840 TSKUQ8WUA8 353 aa7.2□□□□□ -1.26
SYN3-201ENST00000332840 SACSQ9NZJ4 4579 aa7.19□□□□□ -1.26
SYN3-201ENST00000332840 KIR2DL5BA0A0G2JN68 375 aa7.19□□□□□ -1.26
SYN3-201ENST00000332840 KIR2DL5BA0A0G2JPC4 375 aa7.19□□□□□ -1.26
SYN3-201ENST00000332840 FAM231BA6NCW3 169 aa7.19□□□□□ -1.26
SYN3-201ENST00000332840 RBMY1BA6NDE4 496 aaKnown RBP7.19□□□□□ -1.26
SYN3-201ENST00000332840 RBMY1EA6NEQ0 496 aaKnown RBP7.19□□□□□ -1.26
SYN3-201ENST00000332840 FABP5P3A8MUU1 101 aa7.19□□□□□ -1.26
SYN3-201ENST00000332840 RBMY1DP0C7P1 496 aaKnown RBP7.19□□□□□ -1.26
SYN3-201ENST00000332840 TFPI2P48307 235 aa7.19□□□□□ -1.26
SYN3-201ENST00000332840 COX19Q49B96 90 aa7.19□□□□□ -1.26
SYN3-201ENST00000332840 FAM162BQ5T6X4 162 aa7.19□□□□□ -1.26
SYN3-201ENST00000332840 KIR2DL5AQ8N109 375 aa7.19□□□□□ -1.26
SYN3-201ENST00000332840 OR2D3Q8NGH3 330 aa7.19□□□□□ -1.26
SYN3-201ENST00000332840 KIR2DL5BQ8NHK3 375 aa7.19□□□□□ -1.26
SYN3-201ENST00000332840 IL17DQ8TAD2 202 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms