RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 MED13Q9UHV7 2174 aa9.29□□□□□ -0.92
SHMT2-201ENST00000328923 ATRXP46100 2492 aa9.28□□□□□ -0.92
SHMT2-201ENST00000328923 PKD1L2Q7Z442 2459 aa9.28□□□□□ -0.92
SHMT2-201ENST00000328923 TIMM23O14925 209 aa9.28□□□□□ -0.92
SHMT2-201ENST00000328923 LGALS1P09382 135 aaKnown RBP9.28□□□□□ -0.92
SHMT2-201ENST00000328923 UCNP55089 124 aa9.28□□□□□ -0.92
SHMT2-201ENST00000328923 ZNF826PQ6ZT77 177 aa9.28□□□□□ -0.92
SHMT2-201ENST00000328923 PRNTQ86SH4 94 aa9.28□□□□□ -0.92
SHMT2-201ENST00000328923 DEFB124Q8NES8 71 aa9.28□□□□□ -0.92
SHMT2-201ENST00000328923 DOCK7Q96N67 2140 aa9.28□□□□□ -0.92
SHMT2-201ENST00000328923 MBD3L4A6NDZ8 208 aaPredicted RBP9.28□□□□□ -0.92
SHMT2-201ENST00000328923 MBD3L3A6NE82 208 aaPredicted RBP9.28□□□□□ -0.92
SHMT2-201ENST00000328923 MBD3L5A6NJ08 208 aaPredicted RBP9.28□□□□□ -0.92
SHMT2-201ENST00000328923 IGHG3P01860 377 aa9.28□□□□□ -0.92
SHMT2-201ENST00000328923 TCRAP04437 139 aa9.28□□□□□ -0.92
SHMT2-201ENST00000328923 CKS2P33552 79 aa9.28□□□□□ -0.92
SHMT2-201ENST00000328923 CFHR4Q92496 578 aa9.28□□□□□ -0.92
SHMT2-201ENST00000328923 ANKRD11Q6UB99 2663 aaPredicted RBP9.27□□□□□ -0.92
SHMT2-201ENST00000328923 K7EM74 188 aa9.27□□□□□ -0.93
SHMT2-201ENST00000328923 FSTL3O95633 263 aa9.27□□□□□ -0.93
SHMT2-201ENST00000328923 TNFAIP6P98066 277 aaPredicted RBP9.27□□□□□ -0.93
SHMT2-201ENST00000328923 CD69Q07108 199 aa9.27□□□□□ -0.93
SHMT2-201ENST00000328923 NDUFA11Q86Y39 141 aa9.27□□□□□ -0.93
SHMT2-201ENST00000328923 MRAPQ8TCY5 172 aa9.27□□□□□ -0.93
SHMT2-201ENST00000328923 TIMD4Q96H15 378 aa9.27□□□□□ -0.93
SHMT2-201ENST00000328923 TRGV11A0A075B6L2 103 aa9.27□□□□□ -0.93
SHMT2-201ENST00000328923 TFF1P04155 84 aa9.27□□□□□ -0.93
SHMT2-201ENST00000328923 ZNF134P52741 427 aa9.27□□□□□ -0.93
SHMT2-201ENST00000328923 DCTN5Q9BTE1 182 aa9.27□□□□□ -0.93
SHMT2-201ENST00000328923 BAHCC1Q9P281 2608 aa9.26□□□□□ -0.93
SHMT2-201ENST00000328923 DSCAML1Q8TD84 2053 aa9.26□□□□□ -0.93
SHMT2-201ENST00000328923 IGHV3OR15-7A0A075B7D8 119 aa9.26□□□□□ -0.93
SHMT2-201ENST00000328923 MRPS12O15235 138 aaKnown RBP9.26□□□□□ -0.93
SHMT2-201ENST00000328923 ATP5LO75964 103 aa9.26□□□□□ -0.93
SHMT2-201ENST00000328923 IGHV3-13P01766 116 aa9.26□□□□□ -0.93
SHMT2-201ENST00000328923 RPS28P62857 69 aaKnown RBP9.26□□□□□ -0.93
SHMT2-201ENST00000328923 HOXA4Q00056 320 aaPredicted RBP9.26□□□□□ -0.93
SHMT2-201ENST00000328923 CD177Q8N6Q3 437 aa9.26□□□□□ -0.93
SHMT2-201ENST00000328923 KLF14Q8TD94 323 aaPredicted RBP9.26□□□□□ -0.93
SHMT2-201ENST00000328923 TTTY12Q9BZ98 90 aa9.26□□□□□ -0.93
SHMT2-201ENST00000328923 UPK2O00526 184 aa9.26□□□□□ -0.93
SHMT2-201ENST00000328923 MAGEA5P43359 124 aa9.26□□□□□ -0.93
SHMT2-201ENST00000328923 ATP1A1-AS1Q5TC04 95 aa9.26□□□□□ -0.93
SHMT2-201ENST00000328923 DUX4L9Q6RFH8 374 aaPredicted RBP9.26□□□□□ -0.93
SHMT2-201ENST00000328923 LINC00305Q7Z4B0 112 aa9.26□□□□□ -0.93
SHMT2-201ENST00000328923 CXorf67Q86X51 503 aaPredicted RBP9.26□□□□□ -0.93
SHMT2-201ENST00000328923 UQCRQO14949 82 aa9.25□□□□□ -0.93
SHMT2-201ENST00000328923 GAS8-AS1O95177 125 aa9.25□□□□□ -0.93
SHMT2-201ENST00000328923 RNASE2P10153 161 aaKnown RBP9.25□□□□□ -0.93
SHMT2-201ENST00000328923 PRDX2P32119 198 aa9.25□□□□□ -0.93
SHMT2-201ENST00000328923 EDDM3AQ14507 147 aa9.25□□□□□ -0.93
SHMT2-201ENST00000328923 PMVKQ15126 192 aa9.25□□□□□ -0.93
SHMT2-201ENST00000328923 LYZL1Q6UWQ5 148 aa9.25□□□□□ -0.93
SHMT2-201ENST00000328923 POM121L12Q8N7R1 296 aa9.25□□□□□ -0.93
SHMT2-201ENST00000328923 LINC00526Q96FQ7 95 aa9.25□□□□□ -0.93
SHMT2-201ENST00000328923 INS-IGF2F8WCM5 200 aa9.25□□□□□ -0.93
SHMT2-201ENST00000328923 IGHV3-48P01763 117 aa9.25□□□□□ -0.93
SHMT2-201ENST00000328923 PLEKHB2Q96CS7 222 aa9.25□□□□□ -0.93
SHMT2-201ENST00000328923 DUX3Q96PT4 197 aa9.25□□□□□ -0.93
SHMT2-201ENST00000328923 Q9H3A6 140 aa9.25□□□□□ -0.93
SHMT2-201ENST00000328923 TRBV7-7A0A0K0K1E9 115 aa9.24□□□□□ -0.93
SHMT2-201ENST00000328923 J3QLI3 93 aa9.24□□□□□ -0.93
SHMT2-201ENST00000328923 OXTP01178 125 aa9.24□□□□□ -0.93
SHMT2-201ENST00000328923 CD3EP07766 207 aa9.24□□□□□ -0.93
SHMT2-201ENST00000328923 SAA2P0DJI9 122 aaPredicted RBP9.24□□□□□ -0.93
SHMT2-201ENST00000328923 TEX36Q5VZQ5 186 aa9.24□□□□□ -0.93
SHMT2-201ENST00000328923 MDS2Q8NDY4 140 aa9.24□□□□□ -0.93
SHMT2-201ENST00000328923 LINC00477Q96M19 166 aa9.24□□□□□ -0.93
SHMT2-201ENST00000328923 LGALS9O00182 355 aa9.24□□□□□ -0.93
SHMT2-201ENST00000328923 IGLV2-11P01706 119 aa9.24□□□□□ -0.93
SHMT2-201ENST00000328923 C1orf229Q6ZS94 237 aaPredicted RBP9.24□□□□□ -0.93
SHMT2-201ENST00000328923 GOLT1AQ6ZVE7 132 aa9.24□□□□□ -0.93
SHMT2-201ENST00000328923 ZNRF2Q8NHG8 242 aa9.24□□□□□ -0.93
SHMT2-201ENST00000328923 IGFBPL1Q8WX77 278 aa9.24□□□□□ -0.93
SHMT2-201ENST00000328923 SCNM1Q9BWG6 230 aa9.24□□□□□ -0.93
SHMT2-201ENST00000328923 DNAJC13O75165 2243 aa9.23□□□□□ -0.93
SHMT2-201ENST00000328923 CGB3P0DN86 165 aa9.23□□□□□ -0.93
SHMT2-201ENST00000328923 CGB7P0DN87 165 aa9.23□□□□□ -0.93
SHMT2-201ENST00000328923 MRPL20Q9BYC9 149 aaKnown RBP9.23□□□□□ -0.93
SHMT2-201ENST00000328923 MGAQ8IWI9 3026 aa9.23□□□□□ -0.93
SHMT2-201ENST00000328923 GAGE2AQ6NT46 116 aa9.23□□□□□ -0.93
SHMT2-201ENST00000328923 SCGB1D4Q6XE38 83 aa9.23□□□□□ -0.93
SHMT2-201ENST00000328923 FASNP49327 2511 aaKnown RBP9.23□□□□□ -0.93
SHMT2-201ENST00000328923 ITPR1Q14643 2758 aa9.22□□□□□ -0.93
SHMT2-201ENST00000328923 SRRM5B3KS81 715 aa9.22□□□□□ -0.93
SHMT2-201ENST00000328923 CFC1BP0CG36 223 aa9.22□□□□□ -0.93
SHMT2-201ENST00000328923 CFC1P0CG37 223 aa9.22□□□□□ -0.93
SHMT2-201ENST00000328923 RPL13AP40429 203 aaKnown RBP9.22□□□□□ -0.93
SHMT2-201ENST00000328923 Q5XG85 94 aa9.22□□□□□ -0.93
SHMT2-201ENST00000328923 TMEM190Q8WZ59 177 aa9.22□□□□□ -0.93
SHMT2-201ENST00000328923 CTSZQ9UBR2 303 aa9.22□□□□□ -0.93
SHMT2-201ENST00000328923 IGKV1D-17A0A075B6S4 117 aa9.22□□□□□ -0.93
SHMT2-201ENST00000328923 EDN2P20800 178 aa9.22□□□□□ -0.93
SHMT2-201ENST00000328923 CRIP1P50238 77 aa9.22□□□□□ -0.93
SHMT2-201ENST00000328923 EBI3Q14213 229 aa9.22□□□□□ -0.93
SHMT2-201ENST00000328923 TMEM30BQ3MIR4 351 aa9.22□□□□□ -0.93
SHMT2-201ENST00000328923 THAP8Q8NA92 274 aa9.22□□□□□ -0.93
SHMT2-201ENST00000328923 LINC00527Q9UJ94 153 aa9.22□□□□□ -0.93
SHMT2-201ENST00000328923 ZNF815PA8K554 130 aa9.21□□□□□ -0.94
SHMT2-201ENST00000328923 H3BMM0 161 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms