RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 HCP5Q6MZN7 132 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 Q6ZQT7 251 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 ZNF767PQ75MW2 155 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 TCF23Q7RTU1 214 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.84□□□□□ -2.11
SKP1-201ENST00000328392 PPP1R1CQ8WVI7 109 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 MAFIPQ8WZ33 124 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 LSM10Q969L4 123 aaKnown RBP1.84□□□□□ -2.11
SKP1-201ENST00000328392 ARL11Q969Q4 196 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 MRAP2Q96G30 205 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 C2orf50Q96LR7 162 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 TMEM56Q96MV1 263 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 YPEL2Q96QA6 119 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 TMEM222Q9H0R3 208 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 NAA60Q9H7X0 242 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 JPT1Q9UK76 154 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 PRELID3BQ9Y3B1 194 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 TBL2Q9Y4P3 447 aaKnown RBP1.84□□□□□ -2.11
SKP1-201ENST00000328392 HSPB11Q9Y547 144 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 LINC00312Q9Y6C7 94 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 TMEM56-RWDD3S4R434 201 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 DOPEY2Q9Y3R5 2298 aa1.84□□□□□ -2.12
SKP1-201ENST00000328392 DSCAML1Q8TD84 2053 aa1.84□□□□□ -2.12
SKP1-201ENST00000328392 USP9XQ93008 2570 aaPredicted RBP1.84□□□□□ -2.12
SKP1-201ENST00000328392 HIVEP2P31629 2446 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 NAV2Q8IVL1 2488 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 FASNP49327 2511 aaKnown RBP1.83□□□□□ -2.12
SKP1-201ENST00000328392 LAMA5O15230 3695 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 ASPMQ8IZT6 3477 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 NAV3Q8IVL0 2385 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 IGLV10-54A0A075B6I4 117 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 FXYD6-FXYD2A0A087WZ82 144 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 BORCS7-ASMTA0A0B4J1R7 106 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 KANTRA0A1W2PQU2 76 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 RNASEK-C17orf49H0YIS7 233 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 C3orf84H3BNL1 204 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 ARPC5O15511 151 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 ZZEF1O43149 2961 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 MPC2O95563 127 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 GYPAP02724 150 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 RBP4P02753 201 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 CTSGP08311 255 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 CNTFRP26992 372 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 S100A11P31949 105 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 EFNA4P52798 201 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 AKR1C2P52895 323 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 NKX2-5P52952 324 aaPredicted RBP1.83□□□□□ -2.12
SKP1-201ENST00000328392 RAB14P61106 215 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 EDDM3AQ14507 147 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 PSG3Q16557 428 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 RTL8BQ17RB0 113 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 IAH1Q2TAA2 248 aaPredicted RBP1.83□□□□□ -2.12
SKP1-201ENST00000328392 TMEM155Q4W5P6 130 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 MORN2Q502X0 79 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 HEPN1Q6WQI6 88 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 ZNF818PQ6ZRF7 136 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 SLC51BQ86UW2 128 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 C9orf62Q8N4C0 152 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 ZNF738Q8NE65 137 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 DEFB108BQ8NET1 73 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 OR8B3Q8NGG8 313 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 OR51H1Q8NH63 302 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 RNASE11Q8TAA1 199 aaKnown RBP1.83□□□□□ -2.12
SKP1-201ENST00000328392 ZNF714Q96N38 554 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 GAFA1Q96PS6 74 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 OR8B2Q96RD0 313 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 CCL13Q99616 98 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 ARL6Q9H0F7 186 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 FXYD6Q9H0Q3 95 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.83□□□□□ -2.12
SKP1-201ENST00000328392 COA4Q9NYJ1 87 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 FKBP11Q9NYL4 201 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 GSKIPQ9P0R6 139 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 RPUSD1Q9UJJ7 312 aaKnown RBP1.83□□□□□ -2.12
SKP1-201ENST00000328392 TANC2Q9HCD6 1990 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 IGSF10Q6WRI0 2623 aa1.83□□□□□ -2.12
SKP1-201ENST00000328392 KALRNO60229 2985 aa1.82□□□□□ -2.12
SKP1-201ENST00000328392 IGHV3OR15-7A0A075B7D8 119 aa1.82□□□□□ -2.12
SKP1-201ENST00000328392 SMLR1H3BR10 107 aa1.82□□□□□ -2.12
SKP1-201ENST00000328392 M0R1W7 72 aa1.82□□□□□ -2.12
SKP1-201ENST00000328392 TOR1AO14656 332 aa1.82□□□□□ -2.12
SKP1-201ENST00000328392 TCF21O43680 179 aa1.82□□□□□ -2.12
SKP1-201ENST00000328392 DEDDO75618 318 aa1.82□□□□□ -2.12
SKP1-201ENST00000328392 ADAP1O75689 374 aa1.82□□□□□ -2.12
SKP1-201ENST00000328392 SIX6O95475 246 aa1.82□□□□□ -2.12
SKP1-201ENST00000328392 APOA2P02652 100 aa1.82□□□□□ -2.12
SKP1-201ENST00000328392 RD3LP0DJH9 198 aa1.82□□□□□ -2.12
SKP1-201ENST00000328392 TPT1P13693 172 aaKnown RBP1.82□□□□□ -2.12
SKP1-201ENST00000328392 NQO2P16083 231 aa1.82□□□□□ -2.12
SKP1-201ENST00000328392 LGALS3P17931 250 aaKnown RBP1.82□□□□□ -2.12
SKP1-201ENST00000328392 S100A1P23297 94 aa1.82□□□□□ -2.12
SKP1-201ENST00000328392 NFYBP25208 207 aa1.82□□□□□ -2.12
SKP1-201ENST00000328392 RPL12P30050 165 aaKnown RBP1.82□□□□□ -2.12
SKP1-201ENST00000328392 PPP1CCP36873 323 aaKnown RBP1.82□□□□□ -2.12
SKP1-201ENST00000328392 SULT1A2P50226 295 aa1.82□□□□□ -2.12
SKP1-201ENST00000328392 RAB13P51153 203 aa1.82□□□□□ -2.12
SKP1-201ENST00000328392 TAS2R30P59541 319 aa1.82□□□□□ -2.12
SKP1-201ENST00000328392 S100A10P60903 97 aa1.82□□□□□ -2.12
SKP1-201ENST00000328392 UBA52P62987 128 aaKnown RBP1.82□□□□□ -2.12
SKP1-201ENST00000328392 NMSQ5H8A3 153 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms