RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 DLX4Q92988 240 aaPredicted RBP8.97□□□□□ -0.97
COL4A5-201ENST00000328300 K7EIM0 57 aa8.96□□□□□ -0.97
COL4A5-201ENST00000328300 COX11Q9Y6N1 276 aa8.96□□□□□ -0.97
COL4A5-201ENST00000328300 ZNF493Q6ZR52 646 aa8.96□□□□□ -0.97
COL4A5-201ENST00000328300 PHF3Q92576 2039 aaKnown RBP8.96□□□□□ -0.97
COL4A5-201ENST00000328300 TRBV6-1A0A0K0K1D8 114 aa8.96□□□□□ -0.98
COL4A5-201ENST00000328300 XCL2Q9UBD3 114 aa8.96□□□□□ -0.98
COL4A5-201ENST00000328300 PKIGQ9Y2B9 76 aa8.96□□□□□ -0.98
COL4A5-201ENST00000328300 ANXA2RQ3ZCQ2 193 aa8.96□□□□□ -0.98
COL4A5-201ENST00000328300 PRR31Q5SQ13 230 aa8.96□□□□□ -0.98
COL4A5-201ENST00000328300 GPHB5Q86YW7 130 aa8.96□□□□□ -0.98
COL4A5-201ENST00000328300 HEATR1Q9H583 2144 aaKnown RBP8.95□□□□□ -0.98
COL4A5-201ENST00000328300 MED12Q93074 2177 aa8.95□□□□□ -0.98
COL4A5-201ENST00000328300 BOD1L2Q8IYS8 172 aa8.95□□□□□ -0.98
COL4A5-201ENST00000328300 LINC00479Q96M42 142 aa8.95□□□□□ -0.98
COL4A5-201ENST00000328300 WI2-2373I1.2A0A1W2PRP0 233 aa8.95□□□□□ -0.98
COL4A5-201ENST00000328300 ODF3BA8MYP8 253 aa8.95□□□□□ -0.98
COL4A5-201ENST00000328300 IGHV4-38-2P0DP08 117 aa8.95□□□□□ -0.98
COL4A5-201ENST00000328300 C16orf54Q6UWD8 224 aa8.95□□□□□ -0.98
COL4A5-201ENST00000328300 SH2D6Q7Z4S9 175 aa8.95□□□□□ -0.98
COL4A5-201ENST00000328300 Q8N7P7 452 aa8.95□□□□□ -0.98
COL4A5-201ENST00000328300 TIMM21Q9BVV7 248 aa8.95□□□□□ -0.98
COL4A5-201ENST00000328300 POLR3KQ9Y2Y1 108 aaPredicted RBP8.95□□□□□ -0.98
COL4A5-201ENST00000328300 IGHV3-64A0A075B6Q5 118 aa8.95□□□□□ -0.98
COL4A5-201ENST00000328300 C20orf144Q9BQM9 153 aa8.95□□□□□ -0.98
COL4A5-201ENST00000328300 LINC00158P58513 81 aa8.95□□□□□ -0.98
COL4A5-201ENST00000328300 OCIAD2Q56VL3 154 aa8.95□□□□□ -0.98
COL4A5-201ENST00000328300 GVINP1Q7Z2Y8 2422 aa8.95□□□□□ -0.98
COL4A5-201ENST00000328300 ESPL1Q14674 2120 aa8.94□□□□□ -0.98
COL4A5-201ENST00000328300 NUP210LQ5VU65 1888 aa8.94□□□□□ -0.98
COL4A5-201ENST00000328300 ICE1Q9Y2F5 2266 aa8.94□□□□□ -0.98
COL4A5-201ENST00000328300 CACNA1HO95180 2353 aa8.94□□□□□ -0.98
COL4A5-201ENST00000328300 A0A087WWL8 130 aa8.94□□□□□ -0.98
COL4A5-201ENST00000328300 GP9P14770 177 aa8.94□□□□□ -0.98
COL4A5-201ENST00000328300 C18orf32Q8TCD1 76 aa8.94□□□□□ -0.98
COL4A5-201ENST00000328300 DNAJC30Q96LL9 226 aa8.94□□□□□ -0.98
COL4A5-201ENST00000328300 A6NDX4 124 aa8.94□□□□□ -0.98
COL4A5-201ENST00000328300 ODF3L1Q8IXM7 274 aa8.94□□□□□ -0.98
COL4A5-201ENST00000328300 IGHV3-73A0A0B4J1V6 119 aa8.94□□□□□ -0.98
COL4A5-201ENST00000328300 CGB3P0DN86 165 aa8.94□□□□□ -0.98
COL4A5-201ENST00000328300 CGB7P0DN87 165 aa8.94□□□□□ -0.98
COL4A5-201ENST00000328300 MED14OSP0DP75 135 aa8.94□□□□□ -0.98
COL4A5-201ENST00000328300 INSL3P51460 131 aa8.94□□□□□ -0.98
COL4A5-201ENST00000328300 RHOHQ15669 191 aa8.94□□□□□ -0.98
COL4A5-201ENST00000328300 C4orf3Q8WVX3 66 aa8.94□□□□□ -0.98
COL4A5-201ENST00000328300 CEP250Q9BV73 2442 aa8.93□□□□□ -0.98
COL4A5-201ENST00000328300 DEFB130BP0DP73 79 aa8.93□□□□□ -0.98
COL4A5-201ENST00000328300 DEFB130AP0DP74 79 aa8.93□□□□□ -0.98
COL4A5-201ENST00000328300 PMVKQ15126 192 aa8.93□□□□□ -0.98
COL4A5-201ENST00000328300 ZC2HC1AQ96GY0 325 aa8.93□□□□□ -0.98
COL4A5-201ENST00000328300 TMEM243Q9BU79 118 aa8.93□□□□□ -0.98
COL4A5-201ENST00000328300 SNRNP200O75643 2136 aaKnown RBP8.93□□□□□ -0.98
COL4A5-201ENST00000328300 SPINK8P0C7L1 97 aa8.93□□□□□ -0.98
COL4A5-201ENST00000328300 ADAMTSL5Q6ZMM2 481 aa8.93□□□□□ -0.98
COL4A5-201ENST00000328300 TEX22C9J3V5 150 aa8.93□□□□□ -0.98
COL4A5-201ENST00000328300 IGHV3-53P01767 116 aa8.93□□□□□ -0.98
COL4A5-201ENST00000328300 CTSGP08311 255 aa8.93□□□□□ -0.98
COL4A5-201ENST00000328300 C2orf66Q6UXQ4 117 aa8.93□□□□□ -0.98
COL4A5-201ENST00000328300 ZNF407Q9C0G0 2248 aa8.93□□□□□ -0.98
COL4A5-201ENST00000328300 A0A0U1RRA0 63 aa8.93□□□□□ -0.98
COL4A5-201ENST00000328300 S100A7L2Q5SY68 101 aa8.93□□□□□ -0.98
COL4A5-201ENST00000328300 C2orf82Q6UX34 121 aa8.93□□□□□ -0.98
COL4A5-201ENST00000328300 AJUBAQ96IF1 538 aa8.93□□□□□ -0.98
COL4A5-201ENST00000328300 SNHG12Q9BXW3 62 aa8.93□□□□□ -0.98
COL4A5-201ENST00000328300 C6orf226Q5I0X4 101 aa8.93□□□□□ -0.98
COL4A5-201ENST00000328300 C1orf159Q96HA4 380 aa8.93□□□□□ -0.98
COL4A5-201ENST00000328300 CACNA1DQ01668 2161 aa8.92□□□□□ -0.98
COL4A5-201ENST00000328300 C9JQL5 133 aa8.92□□□□□ -0.98
COL4A5-201ENST00000328300 MRPL51Q4U2R6 128 aaKnown RBP8.92□□□□□ -0.98
COL4A5-201ENST00000328300 ZMAT4Q9H898 229 aa8.92□□□□□ -0.98
COL4A5-201ENST00000328300 TMEM213A2RRL7 107 aa8.92□□□□□ -0.98
COL4A5-201ENST00000328300 SMIM2Q9BVW6 85 aa8.92□□□□□ -0.98
COL4A5-201ENST00000328300 SDHAF1A6NFY7 115 aa8.92□□□□□ -0.98
COL4A5-201ENST00000328300 LEPROTO15243 131 aa8.92□□□□□ -0.98
COL4A5-201ENST00000328300 IGKV1-17P01599 117 aa8.92□□□□□ -0.98
COL4A5-201ENST00000328300 ZFP36P26651 326 aaKnown RBP8.92□□□□□ -0.98
COL4A5-201ENST00000328300 CHAC1Q9BUX1 264 aa8.92□□□□□ -0.98
COL4A5-201ENST00000328300 MYO7BQ6PIF6 2116 aa8.92□□□□□ -0.98
COL4A5-201ENST00000328300 DOCK9Q9BZ29 2069 aa8.92□□□□□ -0.98
COL4A5-201ENST00000328300 CLPSL1A2RUU4 121 aa8.92□□□□□ -0.98
COL4A5-201ENST00000328300 CYYR1Q96J86 154 aa8.92□□□□□ -0.98
COL4A5-201ENST00000328300 CST9LQ9H4G1 147 aa8.92□□□□□ -0.98
COL4A5-201ENST00000328300 PRB4P10163 310 aaPredicted RBP8.91□□□□□ -0.98
COL4A5-201ENST00000328300 C16orf74Q96GX8 76 aa8.91□□□□□ -0.98
COL4A5-201ENST00000328300 ZC2HC1BQ5TFG8 222 aa8.91□□□□□ -0.98
COL4A5-201ENST00000328300 AGPAT4-IT1Q9H0P7 198 aa8.91□□□□□ -0.98
COL4A5-201ENST00000328300 KLK9Q9UKQ9 250 aa8.91□□□□□ -0.98
COL4A5-201ENST00000328300 TP53TG1Q9Y2A0 90 aa8.91□□□□□ -0.98
COL4A5-201ENST00000328300 PCNX2A6NKB5 2137 aa8.91□□□□□ -0.98
COL4A5-201ENST00000328300 KNCNA6PVL3 124 aa8.91□□□□□ -0.98
COL4A5-201ENST00000328300 F5H768 121 aa8.91□□□□□ -0.98
COL4A5-201ENST00000328300 PRB1P04280 392 aa8.91□□□□□ -0.98
COL4A5-201ENST00000328300 LMO4P61968 165 aa8.91□□□□□ -0.98
COL4A5-201ENST00000328300 PSCAO43653 123 aa8.91□□□□□ -0.98
COL4A5-201ENST00000328300 MSMPQ1L6U9 139 aa8.91□□□□□ -0.98
COL4A5-201ENST00000328300 LGALS9BQ3B8N2 356 aa8.91□□□□□ -0.98
COL4A5-201ENST00000328300 LGALS9CQ6DKI2 356 aa8.91□□□□□ -0.98
COL4A5-201ENST00000328300 BUB3O43684 328 aa8.9□□□□□ -0.98
COL4A5-201ENST00000328300 HIST1H4AP62805 103 aaKnown RBP8.9□□□□□ -0.98
COL4A5-201ENST00000328300 PHLDA1Q8WV24 401 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms