RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 RBMY1EA6NEQ0 496 aaKnown RBP7.56□□□□□ -1.2
VIPAS39-201ENST00000327028 SCO1O75880 301 aa7.56□□□□□ -1.2
VIPAS39-201ENST00000327028 IGKV3-20P01619 116 aa7.56□□□□□ -1.2
VIPAS39-201ENST00000327028 RBMY1DP0C7P1 496 aaKnown RBP7.56□□□□□ -1.2
VIPAS39-201ENST00000327028 TSPOP30536 169 aa7.56□□□□□ -1.2
VIPAS39-201ENST00000327028 PRR27Q6MZM9 219 aa7.56□□□□□ -1.2
VIPAS39-201ENST00000327028 TRPT1Q86TN4 253 aaKnown RBP7.56□□□□□ -1.2
VIPAS39-201ENST00000327028 SAMD5Q5TGI4 173 aa7.56□□□□□ -1.2
VIPAS39-201ENST00000327028 FAM231DQ6ZW35 169 aa7.56□□□□□ -1.2
VIPAS39-201ENST00000327028 SFRP2Q96HF1 295 aa7.56□□□□□ -1.2
VIPAS39-201ENST00000327028 KLLNB2CW77 178 aa7.55□□□□□ -1.2
VIPAS39-201ENST00000327028 FAM162BQ5T6X4 162 aa7.55□□□□□ -1.2
VIPAS39-201ENST00000327028 PRR9Q5T870 116 aa7.55□□□□□ -1.2
VIPAS39-201ENST00000327028 OSTCQ9NRP0 149 aa7.55□□□□□ -1.2
VIPAS39-201ENST00000327028 C7orf77A4D0Y5 90 aa7.55□□□□□ -1.2
VIPAS39-201ENST00000327028 C19orf71A6NCJ1 209 aa7.55□□□□□ -1.2
VIPAS39-201ENST00000327028 MT-ND4LP03901 98 aa7.55□□□□□ -1.2
VIPAS39-201ENST00000327028 CRIP1P50238 77 aa7.55□□□□□ -1.2
VIPAS39-201ENST00000327028 ZNF80P51504 273 aaPredicted RBP7.55□□□□□ -1.2
VIPAS39-201ENST00000327028 KRTAP10-11P60412 298 aa7.55□□□□□ -1.2
VIPAS39-201ENST00000327028 LINC00322Q6ZN03 302 aaPredicted RBP7.55□□□□□ -1.2
VIPAS39-201ENST00000327028 DEFB125Q8N687 156 aa7.55□□□□□ -1.2
VIPAS39-201ENST00000327028 A0A087WWC5 75 aa7.54□□□□□ -1.2
VIPAS39-201ENST00000327028 G3V4G9 280 aa7.54□□□□□ -1.2
VIPAS39-201ENST00000327028 PPP1R2P9O14990 202 aa7.54□□□□□ -1.2
VIPAS39-201ENST00000327028 SH2D1AO60880 128 aa7.54□□□□□ -1.2
VIPAS39-201ENST00000327028 GPX1P07203 203 aa7.54□□□□□ -1.2
VIPAS39-201ENST00000327028 CDKN1BP46527 198 aa7.54□□□□□ -1.2
VIPAS39-201ENST00000327028 ERVFC1-1P60608 527 aa7.54□□□□□ -1.2
VIPAS39-201ENST00000327028 RNF212Q495C1 297 aa7.54□□□□□ -1.2
VIPAS39-201ENST00000327028 IBA57Q5T440 356 aaKnown RBP7.54□□□□□ -1.2
VIPAS39-201ENST00000327028 ATRAIDQ6UW56 229 aa7.54□□□□□ -1.2
VIPAS39-201ENST00000327028 Q8N1Y9 231 aa7.54□□□□□ -1.2
VIPAS39-201ENST00000327028 C15orf54Q8N8G6 183 aa7.54□□□□□ -1.2
VIPAS39-201ENST00000327028 RNASE7Q9H1E1 156 aaKnown RBP7.54□□□□□ -1.2
VIPAS39-201ENST00000327028 M0R2Z0 102 aa7.54□□□□□ -1.2
VIPAS39-201ENST00000327028 SPINK13Q1W4C9 94 aa7.54□□□□□ -1.2
VIPAS39-201ENST00000327028 Q6AWC8 147 aa7.54□□□□□ -1.2
VIPAS39-201ENST00000327028 NUDT10Q8NFP7 164 aa7.54□□□□□ -1.2
VIPAS39-201ENST00000327028 OR10G8Q8NGN5 311 aa7.54□□□□□ -1.2
VIPAS39-201ENST00000327028 ANAPC16Q96DE5 110 aa7.54□□□□□ -1.2
VIPAS39-201ENST00000327028 DAZAP1Q96EP5 407 aaKnown RBP7.54□□□□□ -1.2
VIPAS39-201ENST00000327028 NUDT11Q96G61 164 aa7.54□□□□□ -1.2
VIPAS39-201ENST00000327028 RPS10P5Q9NQ39 176 aa7.54□□□□□ -1.2
VIPAS39-201ENST00000327028 C7orf71A4D174 169 aa7.53□□□□□ -1.2
VIPAS39-201ENST00000327028 J3KRW8 73 aa7.53□□□□□ -1.2
VIPAS39-201ENST00000327028 AMBPP02760 352 aa7.53□□□□□ -1.2
VIPAS39-201ENST00000327028 PFN1P07737 140 aaKnown RBP7.53□□□□□ -1.2
VIPAS39-201ENST00000327028 BTN1A1Q13410 526 aa7.53□□□□□ -1.2
VIPAS39-201ENST00000327028 GFI1BQ5VTD9 330 aa7.53□□□□□ -1.2
VIPAS39-201ENST00000327028 CTDSP1Q9GZU7 261 aa7.53□□□□□ -1.2
VIPAS39-201ENST00000327028 TRAV21A0A0B4J279 112 aa7.53□□□□□ -1.2
VIPAS39-201ENST00000327028 FABP5P3A8MUU1 101 aa7.53□□□□□ -1.2
VIPAS39-201ENST00000327028 P01737 135 aa7.53□□□□□ -1.2
VIPAS39-201ENST00000327028 RNASE4P34096 147 aaKnown RBP7.53□□□□□ -1.2
VIPAS39-201ENST00000327028 KIR3DS1Q14943 382 aa7.53□□□□□ -1.2
VIPAS39-201ENST00000327028 SRD5A3Q9H8P0 318 aa7.53□□□□□ -1.2
VIPAS39-201ENST00000327028 H7BYZ3 331 aa7.52□□□□□ -1.21
VIPAS39-201ENST00000327028 GATCO43716 136 aaKnown RBP7.52□□□□□ -1.21
VIPAS39-201ENST00000327028 RPP21Q9H633 154 aaKnown RBP7.52□□□□□ -1.21
VIPAS39-201ENST00000327028 V9GYV3 84 aa7.52□□□□□ -1.21
VIPAS39-201ENST00000327028 DNAH3Q8TD57 4116 aa7.52□□□□□ -1.21
VIPAS39-201ENST00000327028 MGAM2Q2M2H8 2515 aa7.52□□□□□ -1.21
VIPAS39-201ENST00000327028 FXYD7P58549 80 aa7.52□□□□□ -1.21
VIPAS39-201ENST00000327028 NUTF2P61970 127 aaKnown RBP7.52□□□□□ -1.21
VIPAS39-201ENST00000327028 MORN3Q6PF18 240 aaPredicted RBP7.52□□□□□ -1.21
VIPAS39-201ENST00000327028 TMEM242Q9NWH2 141 aa7.52□□□□□ -1.21
VIPAS39-201ENST00000327028 TRAV12-2A0A075B6T6 113 aa7.51□□□□□ -1.21
VIPAS39-201ENST00000327028 ZNF705GA8MUZ8 300 aaPredicted RBP7.51□□□□□ -1.21
VIPAS39-201ENST00000327028 CRXO43186 299 aaPredicted RBP7.51□□□□□ -1.21
VIPAS39-201ENST00000327028 RPL35AP18077 110 aaKnown RBP7.51□□□□□ -1.21
VIPAS39-201ENST00000327028 CT83Q5H943 113 aa7.51□□□□□ -1.21
VIPAS39-201ENST00000327028 LINC01559Q495D7 138 aa7.51□□□□□ -1.21
VIPAS39-201ENST00000327028 KPRPQ5T749 579 aaPredicted RBP7.51□□□□□ -1.21
VIPAS39-201ENST00000327028 OR2D3Q8NGH3 330 aa7.51□□□□□ -1.21
VIPAS39-201ENST00000327028 C11orf21Q9P2W6 132 aa7.51□□□□□ -1.21
VIPAS39-201ENST00000327028 TRAV12-3A0A0B4J271 114 aa7.5□□□□□ -1.21
VIPAS39-201ENST00000327028 ZNF324O75467 553 aaPredicted RBP7.5□□□□□ -1.21
VIPAS39-201ENST00000327028 INSP01308 110 aa7.5□□□□□ -1.21
VIPAS39-201ENST00000327028 Q6ZQT7 251 aa7.5□□□□□ -1.21
VIPAS39-201ENST00000327028 C20orf144Q9BQM9 153 aa7.5□□□□□ -1.21
VIPAS39-201ENST00000327028 TMEM189A5PLL7 270 aa7.5□□□□□ -1.21
VIPAS39-201ENST00000327028 NOTCH1P46531 2555 aa7.5□□□□□ -1.21
VIPAS39-201ENST00000327028 NBEAL1Q6ZS30 2694 aa7.5□□□□□ -1.21
VIPAS39-201ENST00000327028 LOC102724200A0A096LPH7 203 aaPredicted RBP7.49□□□□□ -1.21
VIPAS39-201ENST00000327028 ORM1P02763 201 aa7.49□□□□□ -1.21
VIPAS39-201ENST00000327028 RPS20P60866 119 aaKnown RBP7.49□□□□□ -1.21
VIPAS39-201ENST00000327028 RPL19P84098 196 aaKnown RBP7.49□□□□□ -1.21
VIPAS39-201ENST00000327028 C1QTNF4Q9BXJ3 329 aa7.49□□□□□ -1.21
VIPAS39-201ENST00000327028 IL36BQ9NZH7 164 aa7.49□□□□□ -1.21
VIPAS39-201ENST00000327028 XCL2Q9UBD3 114 aa7.49□□□□□ -1.21
VIPAS39-201ENST00000327028 IGKV3D-20A0A0C4DH25 116 aa7.49□□□□□ -1.21
VIPAS39-201ENST00000327028 CXorf65A6NEN9 183 aa7.49□□□□□ -1.21
VIPAS39-201ENST00000327028 CA1P00915 261 aaPredicted RBP7.49□□□□□ -1.21
VIPAS39-201ENST00000327028 GIG44P09565 113 aaPredicted RBP7.49□□□□□ -1.21
VIPAS39-201ENST00000327028 RBMY1A1P0DJD3 496 aaKnown RBP7.49□□□□□ -1.21
VIPAS39-201ENST00000327028 RBMY1CP0DJD4 496 aa7.49□□□□□ -1.21
VIPAS39-201ENST00000327028 IGHV4-30-4P0DP06 118 aa7.49□□□□□ -1.21
VIPAS39-201ENST00000327028 RBMY1FQ15415 496 aaKnown RBP7.49□□□□□ -1.21
VIPAS39-201ENST00000327028 TSKUQ8WUA8 353 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms