RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 DTX2Q86UW9 622 aa12.1□□□□□ -0.47
SHROOM1-201ENST00000319854 SMKR1H3BMG3 65 aa12.1□□□□□ -0.47
SHROOM1-201ENST00000319854 SIVA1O15304 175 aa12.1□□□□□ -0.47
SHROOM1-201ENST00000319854 SMIM13P0DJ93 91 aa12.1□□□□□ -0.47
SHROOM1-201ENST00000319854 RNF5Q99942 180 aa12.1□□□□□ -0.47
SHROOM1-201ENST00000319854 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.09□□□□□ -0.47
SHROOM1-201ENST00000319854 MFAP4P55083 255 aa12.09□□□□□ -0.47
SHROOM1-201ENST00000319854 CCDC144NLQ6NUI1 221 aa12.09□□□□□ -0.47
SHROOM1-201ENST00000319854 ZNF414Q96IQ9 312 aa12.09□□□□□ -0.47
SHROOM1-201ENST00000319854 SHANK2-AS3Q9BTD1 123 aa12.09□□□□□ -0.47
SHROOM1-201ENST00000319854 NDUFA3O95167 84 aa12.09□□□□□ -0.47
SHROOM1-201ENST00000319854 PAX8Q06710 450 aa12.09□□□□□ -0.47
SHROOM1-201ENST00000319854 NPBQ8NG41 125 aa12.09□□□□□ -0.47
SHROOM1-201ENST00000319854 TMEM189A5PLL7 270 aa12.08□□□□□ -0.48
SHROOM1-201ENST00000319854 TRBV19A0A075B6N1 114 aa12.08□□□□□ -0.48
SHROOM1-201ENST00000319854 IGHV7-81A0A0B4J1V7 117 aa12.08□□□□□ -0.48
SHROOM1-201ENST00000319854 HLA-DMBP28068 263 aa12.08□□□□□ -0.48
SHROOM1-201ENST00000319854 EFNA4P52798 201 aa12.08□□□□□ -0.48
SHROOM1-201ENST00000319854 PRELID3AQ96N28 172 aa12.08□□□□□ -0.48
SHROOM1-201ENST00000319854 OTORQ9NRC9 128 aa12.08□□□□□ -0.48
SHROOM1-201ENST00000319854 SMPXQ9UHP9 88 aa12.08□□□□□ -0.48
SHROOM1-201ENST00000319854 AGRNO00468 2067 aa12.08□□□□□ -0.48
SHROOM1-201ENST00000319854 GAGE12HA6NDE8 117 aa12.08□□□□□ -0.48
SHROOM1-201ENST00000319854 SH2D6Q7Z4S9 175 aa12.08□□□□□ -0.48
SHROOM1-201ENST00000319854 GATD1Q8NB37 220 aa12.08□□□□□ -0.48
SHROOM1-201ENST00000319854 PHLDA1Q8WV24 401 aaPredicted RBP12.08□□□□□ -0.48
SHROOM1-201ENST00000319854 IFI27L1Q96BM0 104 aa12.08□□□□□ -0.48
SHROOM1-201ENST00000319854 IGLV11-55A0A075B6I3 123 aa12.07□□□□□ -0.48
SHROOM1-201ENST00000319854 VGLL1Q99990 258 aa12.07□□□□□ -0.48
SHROOM1-201ENST00000319854 IGKV2-40A0A087WW87 121 aaPredicted RBP12.07□□□□□ -0.48
SHROOM1-201ENST00000319854 IGKV2D-40P01614 121 aaPredicted RBP12.07□□□□□ -0.48
SHROOM1-201ENST00000319854 MTURNQ8N3F0 131 aa12.07□□□□□ -0.48
SHROOM1-201ENST00000319854 Q8TAT8 98 aa12.07□□□□□ -0.48
SHROOM1-201ENST00000319854 C8orf49Q96NF6 230 aa12.07□□□□□ -0.48
SHROOM1-201ENST00000319854 SIRPDQ9H106 197 aa12.07□□□□□ -0.48
SHROOM1-201ENST00000319854 WI2-2373I1.2A0A1W2PRP0 233 aa12.06□□□□□ -0.48
SHROOM1-201ENST00000319854 ATP6V0E1O15342 81 aa12.06□□□□□ -0.48
SHROOM1-201ENST00000319854 SCGB2A2Q13296 93 aa12.06□□□□□ -0.48
SHROOM1-201ENST00000319854 C15orf32Q32M92 178 aa12.06□□□□□ -0.48
SHROOM1-201ENST00000319854 LYZL1Q6UWQ5 148 aa12.06□□□□□ -0.48
SHROOM1-201ENST00000319854 ANKRD17O75179 2603 aaKnown RBP12.06□□□□□ -0.48
SHROOM1-201ENST00000319854 F8W735 103 aaPredicted RBP12.06□□□□□ -0.48
SHROOM1-201ENST00000319854 H3BRN7 92 aa12.06□□□□□ -0.48
SHROOM1-201ENST00000319854 Q8N9W7 124 aa12.06□□□□□ -0.48
SHROOM1-201ENST00000319854 CD300EQ496F6 205 aaPredicted RBP12.06□□□□□ -0.48
SHROOM1-201ENST00000319854 SIGLEC15Q6ZMC9 328 aa12.06□□□□□ -0.48
SHROOM1-201ENST00000319854 NRGNQ92686 78 aa12.06□□□□□ -0.48
SHROOM1-201ENST00000319854 HBDP02042 147 aa12.05□□□□□ -0.48
SHROOM1-201ENST00000319854 CLEC3BP05452 202 aa12.05□□□□□ -0.48
SHROOM1-201ENST00000319854 LMO4P61968 165 aa12.05□□□□□ -0.48
SHROOM1-201ENST00000319854 MRPL51Q4U2R6 128 aaKnown RBP12.05□□□□□ -0.48
SHROOM1-201ENST00000319854 SPANXB1Q9NS25 103 aaPredicted RBP12.05□□□□□ -0.48
SHROOM1-201ENST00000319854 EGR2P11161 476 aaPredicted RBP12.05□□□□□ -0.48
SHROOM1-201ENST00000319854 FAM104BQ5XKR9 115 aa12.05□□□□□ -0.48
SHROOM1-201ENST00000319854 ATP6V0BQ99437 205 aa12.05□□□□□ -0.48
SHROOM1-201ENST00000319854 NHP2Q9NX24 153 aaKnown RBP12.05□□□□□ -0.48
SHROOM1-201ENST00000319854 PSG8Q9UQ74 426 aa12.05□□□□□ -0.48
SHROOM1-201ENST00000319854 USP24Q9UPU5 2620 aa12.05□□□□□ -0.48
SHROOM1-201ENST00000319854 MYO9AB2RTY4 2548 aa12.04□□□□□ -0.48
SHROOM1-201ENST00000319854 GAS8-AS1O95177 125 aa12.04□□□□□ -0.48
SHROOM1-201ENST00000319854 NPYP01303 97 aa12.04□□□□□ -0.48
SHROOM1-201ENST00000319854 IGHV4-39P01824 125 aa12.04□□□□□ -0.48
SHROOM1-201ENST00000319854 ZNF493Q6ZR52 646 aa12.04□□□□□ -0.48
SHROOM1-201ENST00000319854 U3KQK5 164 aa12.04□□□□□ -0.48
SHROOM1-201ENST00000319854 SETD2Q9BYW2 2564 aaPredicted RBP12.04□□□□□ -0.48
SHROOM1-201ENST00000319854 NAV2Q8IVL1 2488 aa12.04□□□□□ -0.48
SHROOM1-201ENST00000319854 INSL3P51460 131 aa12.04□□□□□ -0.48
SHROOM1-201ENST00000319854 LY6EQ16553 131 aa12.04□□□□□ -0.48
SHROOM1-201ENST00000319854 CLEC19AQ6UXS0 136 aa12.04□□□□□ -0.48
SHROOM1-201ENST00000319854 SPAG8Q99932 426 aaPredicted RBP12.04□□□□□ -0.48
SHROOM1-201ENST00000319854 PRORYQ9H606 182 aa12.04□□□□□ -0.48
SHROOM1-201ENST00000319854 HHLA3Q9XRX5 114 aa12.04□□□□□ -0.48
SHROOM1-201ENST00000319854 CTSGP08311 255 aa12.04□□□□□ -0.48
SHROOM1-201ENST00000319854 AAMDCQ9H7C9 122 aa12.04□□□□□ -0.48
SHROOM1-201ENST00000319854 A0A1B0GV72 72 aa12.03□□□□□ -0.48
SHROOM1-201ENST00000319854 SCGB1A1P11684 91 aa12.03□□□□□ -0.48
SHROOM1-201ENST00000319854 ETDBQ3ZM63 59 aa12.03□□□□□ -0.48
SHROOM1-201ENST00000319854 AMTNQ6UX39 209 aa12.03□□□□□ -0.48
SHROOM1-201ENST00000319854 ORMDL3Q8N138 153 aa12.03□□□□□ -0.48
SHROOM1-201ENST00000319854 CHAC1Q9BUX1 264 aa12.03□□□□□ -0.48
SHROOM1-201ENST00000319854 H3BMG7 143 aa12.03□□□□□ -0.48
SHROOM1-201ENST00000319854 TMEM14CQ9P0S9 112 aa12.03□□□□□ -0.48
SHROOM1-201ENST00000319854 CCDC168Q8NDH2 2452 aa12.03□□□□□ -0.48
SHROOM1-201ENST00000319854 RAB9AP51151 201 aa12.02□□□□□ -0.48
SHROOM1-201ENST00000319854 ATP5G2Q06055 141 aa12.02□□□□□ -0.48
SHROOM1-201ENST00000319854 SONP18583 2426 aaKnown RBP12.02□□□□□ -0.49
SHROOM1-201ENST00000319854 TRAV40A0A0B4J280 105 aa12.02□□□□□ -0.49
SHROOM1-201ENST00000319854 NPIPB5A8MRT5 1133 aa12.02□□□□□ -0.49
SHROOM1-201ENST00000319854 TTC9CQ8N5M4 171 aa12.02□□□□□ -0.49
SHROOM1-201ENST00000319854 RNF182Q8N6D2 247 aa12.02□□□□□ -0.49
SHROOM1-201ENST00000319854 K7EQM0 130 aa12.02□□□□□ -0.49
SHROOM1-201ENST00000319854 UBE2E1P51965 193 aa12.02□□□□□ -0.49
SHROOM1-201ENST00000319854 MINOS1Q5TGZ0 78 aa12.02□□□□□ -0.49
SHROOM1-201ENST00000319854 Q8N6K4 173 aa12.02□□□□□ -0.49
SHROOM1-201ENST00000319854 SRSF8Q9BRL6 282 aaKnown RBP12.02□□□□□ -0.49
SHROOM1-201ENST00000319854 MINOS1-NBL1R4GNA1 71 aa12.02□□□□□ -0.49
SHROOM1-201ENST00000319854 TRBV25-1A0A075B6N4 114 aa12.01□□□□□ -0.49
SHROOM1-201ENST00000319854 GTSCR1Q86UQ5 136 aa12.01□□□□□ -0.49
SHROOM1-201ENST00000319854 IGHV4-61A0A0C4DH41 118 aa12.01□□□□□ -0.49
SHROOM1-201ENST00000319854 NPFFO15130 113 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms