RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 ZNF415Q09FC8 603 aa8.95□□□□□ -0.98
PCDHGC3-201ENST00000308177 PRORYQ9H606 182 aa8.95□□□□□ -0.98
PCDHGC3-201ENST00000308177 A0A087WWL8 130 aa8.94□□□□□ -0.98
PCDHGC3-201ENST00000308177 LINC01619G3V211 115 aa8.94□□□□□ -0.98
PCDHGC3-201ENST00000308177 HOXA3O43365 443 aaPredicted RBP8.94□□□□□ -0.98
PCDHGC3-201ENST00000308177 TCTEX1D4Q5JR98 221 aa8.94□□□□□ -0.98
PCDHGC3-201ENST00000308177 DEFB104AQ8WTQ1 72 aa8.94□□□□□ -0.98
PCDHGC3-201ENST00000308177 CSTL1Q9H114 145 aa8.94□□□□□ -0.98
PCDHGC3-201ENST00000308177 IGHV3-73A0A0B4J1V6 119 aa8.94□□□□□ -0.98
PCDHGC3-201ENST00000308177 H3BRM9 83 aa8.94□□□□□ -0.98
PCDHGC3-201ENST00000308177 CIDEAO60543 219 aa8.94□□□□□ -0.98
PCDHGC3-201ENST00000308177 SPINK13Q1W4C9 94 aa8.94□□□□□ -0.98
PCDHGC3-201ENST00000308177 VPREB3Q9UKI3 123 aa8.94□□□□□ -0.98
PCDHGC3-201ENST00000308177 COL5A1P20908 1838 aaPredicted RBP8.94□□□□□ -0.98
PCDHGC3-201ENST00000308177 LURAP1LQ8IV03 231 aa8.94□□□□□ -0.98
PCDHGC3-201ENST00000308177 LY6G5BQ8NDX9 201 aa8.94□□□□□ -0.98
PCDHGC3-201ENST00000308177 MRPL51Q4U2R6 128 aaKnown RBP8.93□□□□□ -0.98
PCDHGC3-201ENST00000308177 Q6ZWC4 215 aa8.93□□□□□ -0.98
PCDHGC3-201ENST00000308177 DYNAPQ8N1N2 210 aa8.93□□□□□ -0.98
PCDHGC3-201ENST00000308177 EML5Q05BV3 1969 aa8.93□□□□□ -0.98
PCDHGC3-201ENST00000308177 TRGV4A0A0C4DH28 118 aa8.93□□□□□ -0.98
PCDHGC3-201ENST00000308177 AGPAT4-IT1Q9H0P7 198 aa8.93□□□□□ -0.98
PCDHGC3-201ENST00000308177 POLR3KQ9Y2Y1 108 aaPredicted RBP8.93□□□□□ -0.98
PCDHGC3-201ENST00000308177 INSP01308 110 aa8.93□□□□□ -0.98
PCDHGC3-201ENST00000308177 CD28P10747 220 aa8.93□□□□□ -0.98
PCDHGC3-201ENST00000308177 PRSS57Q6UWY2 283 aa8.93□□□□□ -0.98
PCDHGC3-201ENST00000308177 GTSCR1Q86UQ5 136 aa8.93□□□□□ -0.98
PCDHGC3-201ENST00000308177 C5orf56Q8N8D9 126 aa8.93□□□□□ -0.98
PCDHGC3-201ENST00000308177 UBE2E2Q96LR5 201 aa8.93□□□□□ -0.98
PCDHGC3-201ENST00000308177 FSTL3O95633 263 aa8.92□□□□□ -0.98
PCDHGC3-201ENST00000308177 PLA2G5P39877 138 aa8.92□□□□□ -0.98
PCDHGC3-201ENST00000308177 TMEM95Q3KNT9 176 aa8.92□□□□□ -0.98
PCDHGC3-201ENST00000308177 CD300EQ496F6 205 aaPredicted RBP8.92□□□□□ -0.98
PCDHGC3-201ENST00000308177 COPS9Q8WXC6 57 aa8.92□□□□□ -0.98
PCDHGC3-201ENST00000308177 MRAP2Q96G30 205 aa8.92□□□□□ -0.98
PCDHGC3-201ENST00000308177 TRGV1A0A0A0MS02 117 aa8.92□□□□□ -0.98
PCDHGC3-201ENST00000308177 DEFB113Q30KQ7 82 aa8.92□□□□□ -0.98
PCDHGC3-201ENST00000308177 ANXA2RQ3ZCQ2 193 aa8.92□□□□□ -0.98
PCDHGC3-201ENST00000308177 MRPL16Q9NX20 251 aaKnown RBP8.92□□□□□ -0.98
PCDHGC3-201ENST00000308177 LMO4P61968 165 aa8.92□□□□□ -0.98
PCDHGC3-201ENST00000308177 IGF2BP2-AS1Q96M15 143 aa8.92□□□□□ -0.98
PCDHGC3-201ENST00000308177 C19orf84I3L1E1 186 aa8.91□□□□□ -0.98
PCDHGC3-201ENST00000308177 BUB3O43684 328 aa8.91□□□□□ -0.98
PCDHGC3-201ENST00000308177 APOMO95445 188 aa8.91□□□□□ -0.98
PCDHGC3-201ENST00000308177 COA6Q5JTJ3 125 aaKnown RBP8.91□□□□□ -0.98
PCDHGC3-201ENST00000308177 OR9G4Q8NGQ1 327 aa8.91□□□□□ -0.98
PCDHGC3-201ENST00000308177 WIPF2Q8TF74 440 aaPredicted RBP8.91□□□□□ -0.98
PCDHGC3-201ENST00000308177 HIVEP3Q5T1R4 2406 aa8.91□□□□□ -0.98
PCDHGC3-201ENST00000308177 IGKV1D-37A0A075B6S9 117 aa8.91□□□□□ -0.98
PCDHGC3-201ENST00000308177 EGR2P11161 476 aaPredicted RBP8.91□□□□□ -0.98
PCDHGC3-201ENST00000308177 HTN3P15516 51 aa8.91□□□□□ -0.98
PCDHGC3-201ENST00000308177 FANCD2OSQ96PS1 177 aa8.91□□□□□ -0.98
PCDHGC3-201ENST00000308177 NHP2Q9NX24 153 aaKnown RBP8.91□□□□□ -0.98
PCDHGC3-201ENST00000308177 RPL35AP18077 110 aaKnown RBP8.91□□□□□ -0.98
PCDHGC3-201ENST00000308177 ZC2HC1BQ5TFG8 222 aa8.91□□□□□ -0.98
PCDHGC3-201ENST00000308177 ORAOV1Q8WV07 137 aa8.91□□□□□ -0.98
PCDHGC3-201ENST00000308177 C20orf144Q9BQM9 153 aa8.91□□□□□ -0.98
PCDHGC3-201ENST00000308177 HCFC1P51610 2035 aa8.91□□□□□ -0.98
PCDHGC3-201ENST00000308177 COL4A2P08572 1712 aa8.91□□□□□ -0.98
PCDHGC3-201ENST00000308177 KIAA1549Q9HCM3 1950 aa8.91□□□□□ -0.98
PCDHGC3-201ENST00000308177 WI2-2373I1.2A0A1W2PRP0 233 aa8.9□□□□□ -0.98
PCDHGC3-201ENST00000308177 ZNF815PA8K554 130 aa8.9□□□□□ -0.98
PCDHGC3-201ENST00000308177 CDKN1BP46527 198 aa8.9□□□□□ -0.98
PCDHGC3-201ENST00000308177 DMRTA1Q5VZB9 504 aa8.9□□□□□ -0.98
PCDHGC3-201ENST00000308177 MRPL53Q96EL3 112 aaKnown RBP8.9□□□□□ -0.98
PCDHGC3-201ENST00000308177 EXPH5Q8NEV8 1989 aa8.9□□□□□ -0.98
PCDHGC3-201ENST00000308177 ODF3BA8MYP8 253 aa8.9□□□□□ -0.98
PCDHGC3-201ENST00000308177 H3BUT2 72 aa8.9□□□□□ -0.98
PCDHGC3-201ENST00000308177 HSD52Q0P140 79 aa8.9□□□□□ -0.98
PCDHGC3-201ENST00000308177 KLK9Q9UKQ9 250 aa8.9□□□□□ -0.98
PCDHGC3-201ENST00000308177 F6UB75 175 aa8.9□□□□□ -0.99
PCDHGC3-201ENST00000308177 ZNF503Q96F45 646 aa8.9□□□□□ -0.99
PCDHGC3-201ENST00000308177 TOMM7Q9P0U1 55 aa8.9□□□□□ -0.99
PCDHGC3-201ENST00000308177 RANBP2P49792 3224 aaKnown RBP8.9□□□□□ -0.99
PCDHGC3-201ENST00000308177 TRAV12-2A0A075B6T6 113 aa8.89□□□□□ -0.99
PCDHGC3-201ENST00000308177 IGHV1OR15-1A0A075B7D0 117 aa8.89□□□□□ -0.99
PCDHGC3-201ENST00000308177 PLNP26678 52 aa8.89□□□□□ -0.99
PCDHGC3-201ENST00000308177 C1QTNF4Q9BXJ3 329 aa8.89□□□□□ -0.99
PCDHGC3-201ENST00000308177 IGKV3D-20A0A0C4DH25 116 aa8.89□□□□□ -0.99
PCDHGC3-201ENST00000308177 IGHV1-24A0A0C4DH33 117 aa8.89□□□□□ -0.99
PCDHGC3-201ENST00000308177 RBAKDNA6NC62 111 aa8.89□□□□□ -0.99
PCDHGC3-201ENST00000308177 SEC11AP67812 179 aa8.89□□□□□ -0.99
PCDHGC3-201ENST00000308177 RPL36AP83881 106 aaKnown RBP8.89□□□□□ -0.99
PCDHGC3-201ENST00000308177 RPL36ALQ969Q0 106 aaKnown RBP8.89□□□□□ -0.99
PCDHGC3-201ENST00000308177 XCL2Q9UBD3 114 aa8.89□□□□□ -0.99
PCDHGC3-201ENST00000308177 KLF12Q9Y4X4 402 aa8.89□□□□□ -0.99
PCDHGC3-201ENST00000308177 SIGLEC8Q9NYZ4 499 aa8.89□□□□□ -0.99
PCDHGC3-201ENST00000308177 SPCS1Q9Y6A9 102 aa8.89□□□□□ -0.99
PCDHGC3-201ENST00000308177 CPAMD8Q8IZJ3 1885 aa8.89□□□□□ -0.99
PCDHGC3-201ENST00000308177 NPYP01303 97 aa8.89□□□□□ -0.99
PCDHGC3-201ENST00000308177 Q8N8P6 123 aa8.89□□□□□ -0.99
PCDHGC3-201ENST00000308177 AJUBAQ96IF1 538 aa8.89□□□□□ -0.99
PCDHGC3-201ENST00000308177 RNF114Q9Y508 228 aa8.89□□□□□ -0.99
PCDHGC3-201ENST00000308177 LENEPQ9Y5L5 61 aa8.89□□□□□ -0.99
PCDHGC3-201ENST00000308177 ABCA2Q9BZC7 2435 aa8.88□□□□□ -0.99
PCDHGC3-201ENST00000308177 IGHV3-53P01767 116 aa8.88□□□□□ -0.99
PCDHGC3-201ENST00000308177 HOXD3P31249 432 aaPredicted RBP8.88□□□□□ -0.99
PCDHGC3-201ENST00000308177 MPV17L2Q567V2 206 aa8.88□□□□□ -0.99
PCDHGC3-201ENST00000308177 PRRC2CQ9Y520 2896 aaKnown RBP8.88□□□□□ -0.99
PCDHGC3-201ENST00000308177 A0A087X0K7 114 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms