RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 ZNF493Q6ZR52 646 aa7.9□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 ZNF680Q8NEM1 530 aa7.9□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 PHLDA1Q8WV24 401 aaPredicted RBP7.9□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 HIST1H2BAQ96A08 127 aa7.9□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 SGK494Q96LW2 274 aa7.9□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 TREM1Q9NP99 234 aa7.9□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 MANBALQ9NQG1 85 aa7.9□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 CELA1Q9UNI1 258 aa7.9□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 PSG8Q9UQ74 426 aa7.9□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 KLK5Q9Y337 293 aaPredicted RBP7.9□□□□□ -1.14
CSPG4P1Y-201ENST00000306641 STAB2Q8WWQ8 2551 aa7.89□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 CBY3A6NI87 242 aa7.89□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 LYRM9A8MSI8 78 aa7.89□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 SNURFLB1AK76 121 aa7.89□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 C11orf94C9JXX5 98 aa7.89□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 ATP5G3P48201 142 aa7.89□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 DAD1P61803 113 aa7.89□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 UBE2G1P62253 170 aa7.89□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 PRR9Q5T870 116 aa7.89□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 ALKAL2Q6UX46 152 aa7.89□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 PRNTQ86SH4 94 aa7.89□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 EIF4E3Q8N5X7 224 aaKnown RBP7.89□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 GNG13Q9P2W3 67 aa7.89□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 DKK2Q9UBU2 259 aa7.89□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 IGHV1OR15-1A0A075B7D0 117 aa7.88□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 TRAV10A0A0B4J240 114 aa7.88□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 TRAV21A0A0B4J279 112 aa7.88□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 ZNF324O75467 553 aaPredicted RBP7.88□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 PRM2P04554 102 aa7.88□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 AZU1P20160 251 aa7.88□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 AKR1C3P42330 323 aa7.88□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 Q6AWC8 147 aa7.88□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 CEMP1Q6PRD7 247 aaPredicted RBP7.88□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 FAM159AQ6UWV7 190 aa7.88□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 Q6ZTC4 211 aa7.88□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 RNASE8Q8TDE3 154 aaKnown RBP7.88□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 FMC1Q96HJ9 113 aa7.88□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 NAGKQ9UJ70 344 aa7.88□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 TIMM8BQ9Y5J9 83 aaPredicted RBP7.88□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 TRAV1-1A0A0B4J248 108 aa7.87□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 TRAV34A0A0B4J273 112 aa7.87□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 BLOC1S1P78537 153 aa7.87□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 ZNF415Q09FC8 603 aa7.87□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 C12orf74Q32Q52 190 aa7.87□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 SMUG1Q53HV7 270 aa7.87□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 SAPCD1Q5SSQ6 148 aa7.87□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 ZNF767PQ75MW2 155 aa7.87□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 Q86TA4 180 aa7.87□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 LINC00467Q9BRT7 94 aa7.87□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 BOLA1Q9Y3E2 137 aa7.87□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 TRGV11A0A075B6L2 103 aa7.86□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 ANXA2RQ3ZCQ2 193 aa7.86□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 MUC21Q5SSG8 566 aa7.86□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 C2CD4CQ8TF44 421 aa7.86□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 C8orf49Q96NF6 230 aa7.86□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 TXNDC17Q9BRA2 123 aa7.86□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 NOP10Q9NPE3 64 aaKnown RBP7.86□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 DEFB131BA0A096LNP1 70 aa7.85□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 SCO2A0A1W2PP80 73 aa7.85□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 PLAC8L1A1L4L8 177 aa7.85□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 GCGP01275 180 aa7.85□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 IGLV2-11P01706 119 aa7.85□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 S100A9P06702 114 aaKnown RBP7.85□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 DEFB130BP0DP73 79 aa7.85□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 DEFB130AP0DP74 79 aa7.85□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 HTN3P15516 51 aa7.85□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 TAGLN2P37802 199 aaKnown RBP7.85□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 IBA57Q5T440 356 aaKnown RBP7.85□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 TVP23CQ96ET8 276 aa7.85□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 LINC00479Q96M42 142 aa7.85□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 SDF2L1Q9HCN8 221 aa7.85□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 PFN1P07737 140 aaKnown RBP7.84□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 BCL2P10415 239 aa7.84□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 TCL1AP56279 114 aa7.84□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 CCL20P78556 96 aa7.84□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 TMEM183BQ1AE95 376 aa7.84□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 Q6ZQT7 251 aa7.84□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 TMEM183AQ8IXX5 376 aa7.84□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 KCNS1Q96KK3 526 aa7.84□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 GSN-AS1Q9NRJ2 163 aa7.84□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 ZFP30Q9Y2G7 519 aa7.84□□□□□ -1.15
CSPG4P1Y-201ENST00000306641 DNAH7Q8WXX0 4024 aa7.83□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 IGLL5B9A064 214 aa7.83□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 PDE6DO43924 150 aa7.83□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 MEF2BQ02080 365 aaPredicted RBP7.83□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 DAZ2Q13117 558 aaKnown RBP7.83□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 C11orf72Q8NBR9 251 aa7.83□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 VAX2Q9UIW0 290 aa7.83□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 TP53TG3Q9ULZ0 132 aa7.83□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 TRGV1A0A0A0MS02 117 aa7.82□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 TRBV6-1A0A0K0K1D8 114 aa7.82□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 GAGE12BA1L429 117 aa7.82□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 GAGE7O76087 117 aa7.82□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 ATP5G1P05496 136 aa7.82□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 GAGE12FP0CL80 117 aa7.82□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 GAGE12GP0CL81 117 aa7.82□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 GAGE12IP0CL82 117 aa7.82□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 TCTAP57738 103 aa7.82□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 KLF12Q9Y4X4 402 aa7.82□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 TRGV2A0A075B6R0 118 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms