RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 TIRAPP58753 221 aa10.85□□□□□ -0.67
TRIM56-201ENST00000306085 LY6DQ14210 128 aa10.85□□□□□ -0.67
TRIM56-201ENST00000306085 MRPL51Q4U2R6 128 aaKnown RBP10.85□□□□□ -0.67
TRIM56-201ENST00000306085 MBD3L2Q8NHZ7 208 aaPredicted RBP10.85□□□□□ -0.67
TRIM56-201ENST00000306085 H0YJW9 148 aa10.85□□□□□ -0.67
TRIM56-201ENST00000306085 DSCAMO60469 2012 aa10.85□□□□□ -0.67
TRIM56-201ENST00000306085 APOC4P55056 127 aa10.84□□□□□ -0.67
TRIM56-201ENST00000306085 PSPNO60542 156 aa10.84□□□□□ -0.67
TRIM56-201ENST00000306085 IGHV1-46P01743 117 aa10.84□□□□□ -0.67
TRIM56-201ENST00000306085 REG4Q9BYZ8 158 aa10.84□□□□□ -0.67
TRIM56-201ENST00000306085 A0A087WV48 116 aa10.84□□□□□ -0.67
TRIM56-201ENST00000306085 LY96Q9Y6Y9 160 aa10.84□□□□□ -0.67
TRIM56-201ENST00000306085 PFN1P07737 140 aaKnown RBP10.84□□□□□ -0.67
TRIM56-201ENST00000306085 ZNF503Q96F45 646 aa10.84□□□□□ -0.67
TRIM56-201ENST00000306085 TLN2Q9Y4G6 2542 aa10.84□□□□□ -0.67
TRIM56-201ENST00000306085 OVOL3O00110 214 aa10.84□□□□□ -0.67
TRIM56-201ENST00000306085 DSCR9P59020 149 aa10.84□□□□□ -0.67
TRIM56-201ENST00000306085 FOXE3Q13461 319 aa10.84□□□□□ -0.67
TRIM56-201ENST00000306085 NREPQ16612 68 aa10.84□□□□□ -0.67
TRIM56-201ENST00000306085 NTF4P34130 210 aa10.84□□□□□ -0.67
TRIM56-201ENST00000306085 DENND4CQ5VZ89 1909 aa10.84□□□□□ -0.67
TRIM56-201ENST00000306085 C18orf32Q8TCD1 76 aa10.84□□□□□ -0.67
TRIM56-201ENST00000306085 HS3ST6Q96QI5 342 aa10.84□□□□□ -0.67
TRIM56-201ENST00000306085 C9orf47Q6ZRZ4 202 aa10.83□□□□□ -0.68
TRIM56-201ENST00000306085 PRDM6Q9NQX0 595 aa10.83□□□□□ -0.68
TRIM56-201ENST00000306085 PRSS46E5RG02 174 aa10.83□□□□□ -0.68
TRIM56-201ENST00000306085 IGHV1-18A0A0C4DH31 117 aa10.83□□□□□ -0.68
TRIM56-201ENST00000306085 DUX4L9Q6RFH8 374 aaPredicted RBP10.83□□□□□ -0.68
TRIM56-201ENST00000306085 CASC2Q6XLA1 102 aa10.83□□□□□ -0.68
TRIM56-201ENST00000306085 ZFP2Q6ZN57 461 aa10.83□□□□□ -0.68
TRIM56-201ENST00000306085 CTHRC1Q96CG8 243 aa10.83□□□□□ -0.68
TRIM56-201ENST00000306085 ACACBO00763 2458 aa10.83□□□□□ -0.68
TRIM56-201ENST00000306085 IGKV1D-8A0A087WSZ0 117 aa10.83□□□□□ -0.68
TRIM56-201ENST00000306085 H0Y9J4 135 aa10.83□□□□□ -0.68
TRIM56-201ENST00000306085 BUB3O43684 328 aa10.83□□□□□ -0.68
TRIM56-201ENST00000306085 MRPL35Q9NZE8 188 aaKnown RBP10.83□□□□□ -0.68
TRIM56-201ENST00000306085 Q6ZQT7 251 aa10.83□□□□□ -0.68
TRIM56-201ENST00000306085 MINOS1Q5TGZ0 78 aa10.82□□□□□ -0.68
TRIM56-201ENST00000306085 MINOS1-NBL1R4GNA1 71 aa10.82□□□□□ -0.68
TRIM56-201ENST00000306085 BUB1B-PAK6H3BSN5 160 aa10.82□□□□□ -0.68
TRIM56-201ENST00000306085 PDE6HQ13956 83 aa10.82□□□□□ -0.68
TRIM56-201ENST00000306085 CCL25O15444 150 aa10.82□□□□□ -0.68
TRIM56-201ENST00000306085 TAX1BP3O14907 124 aa10.82□□□□□ -0.68
TRIM56-201ENST00000306085 ADAMTSL3P82987 1691 aa10.82□□□□□ -0.68
TRIM56-201ENST00000306085 ZNF672Q499Z4 452 aaPredicted RBP10.81□□□□□ -0.68
TRIM56-201ENST00000306085 LAIR2Q6ISS4 152 aa10.81□□□□□ -0.68
TRIM56-201ENST00000306085 IGLL5B9A064 214 aa10.81□□□□□ -0.68
TRIM56-201ENST00000306085 Q9H8V8 135 aa10.81□□□□□ -0.68
TRIM56-201ENST00000306085 ZNF493Q6ZR52 646 aa10.81□□□□□ -0.68
TRIM56-201ENST00000306085 ETV2O00321 342 aaPredicted RBP10.8□□□□□ -0.68
TRIM56-201ENST00000306085 SEM1Q6ZVN7 128 aa10.8□□□□□ -0.68
TRIM56-201ENST00000306085 C12orf74Q32Q52 190 aa10.8□□□□□ -0.68
TRIM56-201ENST00000306085 SHANK2-AS3Q9BTD1 123 aa10.8□□□□□ -0.68
TRIM56-201ENST00000306085 B4DSR2 109 aa10.8□□□□□ -0.68
TRIM56-201ENST00000306085 IGKV1-9A0A0C4DH69 117 aa10.8□□□□□ -0.68
TRIM56-201ENST00000306085 WIPF3A6NGB9 483 aa10.8□□□□□ -0.68
TRIM56-201ENST00000306085 F8VRH5 84 aa10.8□□□□□ -0.68
TRIM56-201ENST00000306085 WISP3O95389 354 aaPredicted RBP10.8□□□□□ -0.68
TRIM56-201ENST00000306085 SPRR3Q9UBC9 169 aa10.8□□□□□ -0.68
TRIM56-201ENST00000306085 TRAV4A0A0B4J268 109 aa10.79□□□□□ -0.68
TRIM56-201ENST00000306085 Q0VG73 95 aa10.79□□□□□ -0.68
TRIM56-201ENST00000306085 Q6ZWC4 215 aa10.79□□□□□ -0.68
TRIM56-201ENST00000306085 SIGLEC8Q9NYZ4 499 aa10.79□□□□□ -0.68
TRIM56-201ENST00000306085 IFI6P09912 130 aa10.79□□□□□ -0.68
TRIM56-201ENST00000306085 DYNAPQ8N1N2 210 aa10.79□□□□□ -0.68
TRIM56-201ENST00000306085 NTN3O00634 580 aaPredicted RBP10.79□□□□□ -0.68
TRIM56-201ENST00000306085 C1orf53Q5VUE5 145 aa10.79□□□□□ -0.68
TRIM56-201ENST00000306085 FAM110DQ8TAY7 271 aaPredicted RBP10.79□□□□□ -0.68
TRIM56-201ENST00000306085 ZMAT4Q9H898 229 aa10.79□□□□□ -0.68
TRIM56-201ENST00000306085 SLC25A29Q8N8R3 303 aa10.79□□□□□ -0.68
TRIM56-201ENST00000306085 MLST8Q9BVC4 326 aa10.79□□□□□ -0.68
TRIM56-201ENST00000306085 TMEM178BH3BS89 294 aa10.79□□□□□ -0.68
TRIM56-201ENST00000306085 SAA4P35542 130 aa10.79□□□□□ -0.68
TRIM56-201ENST00000306085 EFNA4P52798 201 aa10.79□□□□□ -0.68
TRIM56-201ENST00000306085 C5orf67F2Z3F1 127 aa10.78□□□□□ -0.68
TRIM56-201ENST00000306085 UBE2AP49459 152 aa10.78□□□□□ -0.68
TRIM56-201ENST00000306085 A0A0B4J2C4 111 aa10.78□□□□□ -0.68
TRIM56-201ENST00000306085 SMIM10L1P0DMW3 83 aa10.78□□□□□ -0.68
TRIM56-201ENST00000306085 SMIM10Q96HG1 83 aa10.78□□□□□ -0.68
TRIM56-201ENST00000306085 KIF26AQ9ULI4 1882 aaPredicted RBP10.78□□□□□ -0.68
TRIM56-201ENST00000306085 ACANP16112 2415 aa10.78□□□□□ -0.68
TRIM56-201ENST00000306085 PKIGQ9Y2B9 76 aa10.78□□□□□ -0.68
TRIM56-201ENST00000306085 A0A0J9YY99 117 aa10.78□□□□□ -0.68
TRIM56-201ENST00000306085 CYYR1Q96J86 154 aa10.78□□□□□ -0.68
TRIM56-201ENST00000306085 V9GYY9 64 aa10.78□□□□□ -0.68
TRIM56-201ENST00000306085 LINC01619G3V211 115 aa10.77□□□□□ -0.68
TRIM56-201ENST00000306085 EFNA2O43921 213 aa10.77□□□□□ -0.68
TRIM56-201ENST00000306085 ZNF134P52741 427 aa10.77□□□□□ -0.69
TRIM56-201ENST00000306085 NPYP01303 97 aa10.77□□□□□ -0.69
TRIM56-201ENST00000306085 CR1LQ2VPA4 569 aa10.77□□□□□ -0.69
TRIM56-201ENST00000306085 MRPL14Q6P1L8 145 aaKnown RBP10.77□□□□□ -0.69
TRIM56-201ENST00000306085 CRYGBP07316 175 aa10.77□□□□□ -0.69
TRIM56-201ENST00000306085 PCNX3Q9H6A9 2034 aa10.77□□□□□ -0.69
TRIM56-201ENST00000306085 LINC00473A8K010 186 aa10.77□□□□□ -0.69
TRIM56-201ENST00000306085 IGLL1P15814 213 aa10.77□□□□□ -0.69
TRIM56-201ENST00000306085 DEFB125Q8N687 156 aa10.77□□□□□ -0.69
TRIM56-201ENST00000306085 SH2D6Q7Z4S9 175 aa10.77□□□□□ -0.69
TRIM56-201ENST00000306085 LINC01356Q8N9X3 169 aa10.77□□□□□ -0.69
TRIM56-201ENST00000306085 C8orf86Q6ZUL3 223 aa10.77□□□□□ -0.69
TRIM56-201ENST00000306085 COLQQ9Y215 455 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms