RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 KIR3DS1Q14943 382 aa12.09□□□□□ -0.47
CHAF1A-201ENST00000301280 CLEC2AQ6UVW9 174 aa12.09□□□□□ -0.47
CHAF1A-201ENST00000301280 ZNF492Q9P255 531 aa12.09□□□□□ -0.47
CHAF1A-201ENST00000301280 NIPBLQ6KC79 2804 aaeCLIP12.09□□□□□ -0.478e-10■□□□□ 10.7
CHAF1A-201ENST00000301280 EDN2P20800 178 aa12.09□□□□□ -0.47
CHAF1A-201ENST00000301280 LMO4P61968 165 aa12.09□□□□□ -0.47
CHAF1A-201ENST00000301280 HIST1H1AQ02539 215 aaPredicted RBP12.09□□□□□ -0.47
CHAF1A-201ENST00000301280 ATP5G2Q06055 141 aa12.09□□□□□ -0.47
CHAF1A-201ENST00000301280 FAM162BQ5T6X4 162 aa12.09□□□□□ -0.47
CHAF1A-201ENST00000301280 ATP5L2Q7Z4Y8 100 aa12.09□□□□□ -0.47
CHAF1A-201ENST00000301280 FER1L6-AS1Q8NA97 138 aa12.09□□□□□ -0.47
CHAF1A-201ENST00000301280 C19orf71A6NCJ1 209 aa12.08□□□□□ -0.48
CHAF1A-201ENST00000301280 NPIPB6E9PJ23 425 aa12.08□□□□□ -0.48
CHAF1A-201ENST00000301280 F8W735 103 aaPredicted RBP12.08□□□□□ -0.48
CHAF1A-201ENST00000301280 PRSS1P07477 247 aa12.08□□□□□ -0.48
CHAF1A-201ENST00000301280 MPV17L2Q567V2 206 aa12.08□□□□□ -0.48
CHAF1A-201ENST00000301280 SPANXN1Q5VSR9 72 aa12.08□□□□□ -0.48
CHAF1A-201ENST00000301280 UNQ9165/PRO28630Q6UXU0 137 aa12.08□□□□□ -0.48
CHAF1A-201ENST00000301280 PRR25Q96S07 402 aa12.08□□□□□ -0.48
CHAF1A-201ENST00000301280 METTL26Q96S19 204 aa12.08□□□□□ -0.48
CHAF1A-201ENST00000301280 SMAD5-AS1Q9Y6J3 95 aa12.08□□□□□ -0.48
CHAF1A-201ENST00000301280 TRAV30A0A087WSZ9 112 aa12.08□□□□□ -0.48
CHAF1A-201ENST00000301280 VAMP3Q15836 100 aa12.08□□□□□ -0.48
CHAF1A-201ENST00000301280 TMEM78Q5T7P6 136 aa12.08□□□□□ -0.48
CHAF1A-201ENST00000301280 HELZ2Q9BYK8 2649 aaKnown RBP12.07□□□□□ -0.48
CHAF1A-201ENST00000301280 ITPR3Q14573 2671 aa12.07□□□□□ -0.48
CHAF1A-201ENST00000301280 K7EMI3 77 aa12.07□□□□□ -0.48
CHAF1A-201ENST00000301280 ARL3P36405 182 aa12.07□□□□□ -0.48
CHAF1A-201ENST00000301280 KLHDC1Q8N7A1 406 aa12.07□□□□□ -0.48
CHAF1A-201ENST00000301280 TTTY13Q9BZ97 58 aa12.07□□□□□ -0.48
CHAF1A-201ENST00000301280 H3BVH4 76 aa12.07□□□□□ -0.48
CHAF1A-201ENST00000301280 TGFAP01135 160 aa12.07□□□□□ -0.48
CHAF1A-201ENST00000301280 MGPP08493 103 aa12.07□□□□□ -0.48
CHAF1A-201ENST00000301280 CACNG7P62955 275 aa12.07□□□□□ -0.48
CHAF1A-201ENST00000301280 SIRPDQ9H106 197 aa12.07□□□□□ -0.48
CHAF1A-201ENST00000301280 ODF3BA8MYP8 253 aa12.06□□□□□ -0.48
CHAF1A-201ENST00000301280 TRAV41A0A0B4J266 112 aa12.06□□□□□ -0.48
CHAF1A-201ENST00000301280 SYS1-DBNDD2H3BUS1 97 aa12.06□□□□□ -0.48
CHAF1A-201ENST00000301280 UBE2E1P51965 193 aa12.06□□□□□ -0.48
CHAF1A-201ENST00000301280 RAB37Q96AX2 223 aa12.06□□□□□ -0.48
CHAF1A-201ENST00000301280 NDUFA3O95167 84 aa12.06□□□□□ -0.48
CHAF1A-201ENST00000301280 NPBQ8NG41 125 aa12.06□□□□□ -0.48
CHAF1A-201ENST00000301280 GFRA4Q9GZZ7 299 aa12.06□□□□□ -0.48
CHAF1A-201ENST00000301280 NPYP01303 97 aa12.05□□□□□ -0.48
CHAF1A-201ENST00000301280 ZNF48Q96MX3 618 aaPredicted RBP12.05□□□□□ -0.48
CHAF1A-201ENST00000301280 FLNBO75369 2602 aaKnown RBP12.05□□□□□ -0.48
CHAF1A-201ENST00000301280 KLK9Q2XQG4 91 aa12.05□□□□□ -0.48
CHAF1A-201ENST00000301280 S100A7AQ86SG5 101 aa12.05□□□□□ -0.48
CHAF1A-201ENST00000301280 GATD1Q8NB37 220 aa12.05□□□□□ -0.48
CHAF1A-201ENST00000301280 CCDC140Q96MF4 163 aa12.05□□□□□ -0.48
CHAF1A-201ENST00000301280 KLK9Q9UKQ9 250 aa12.05□□□□□ -0.48
CHAF1A-201ENST00000301280 FAM231BA6NCW3 169 aa12.04□□□□□ -0.48
CHAF1A-201ENST00000301280 OR10AG1Q8NH19 301 aa12.04□□□□□ -0.48
CHAF1A-201ENST00000301280 TMEM191AQ9H0A3 160 aa12.04□□□□□ -0.48
CHAF1A-201ENST00000301280 K7EP13 123 aa12.04□□□□□ -0.48
CHAF1A-201ENST00000301280 ANKRD39Q53RE8 183 aa12.04□□□□□ -0.48
CHAF1A-201ENST00000301280 EEF1AKMT3Q96AZ1 226 aa12.04□□□□□ -0.48
CHAF1A-201ENST00000301280 AGPAT4-IT1Q9H0P7 198 aa12.04□□□□□ -0.48
CHAF1A-201ENST00000301280 TAX1BP3O14907 124 aa12.04□□□□□ -0.48
CHAF1A-201ENST00000301280 MRPS12O15235 138 aaKnown RBP12.04□□□□□ -0.48
CHAF1A-201ENST00000301280 FCER1GP30273 86 aa12.04□□□□□ -0.48
CHAF1A-201ENST00000301280 RNASE4P34096 147 aaKnown RBP12.04□□□□□ -0.48
CHAF1A-201ENST00000301280 PSG9Q00887 426 aa12.04□□□□□ -0.48
CHAF1A-201ENST00000301280 TTC9CQ8N5M4 171 aa12.04□□□□□ -0.48
CHAF1A-201ENST00000301280 CRXO43186 299 aaPredicted RBP12.03□□□□□ -0.48
CHAF1A-201ENST00000301280 PAX8Q06710 450 aa12.03□□□□□ -0.48
CHAF1A-201ENST00000301280 MRPL51Q4U2R6 128 aaKnown RBP12.03□□□□□ -0.48
CHAF1A-201ENST00000301280 HIST2H2BCQ6DN03 193 aa12.03□□□□□ -0.48
CHAF1A-201ENST00000301280 DUX3Q96PT4 197 aa12.03□□□□□ -0.48
CHAF1A-201ENST00000301280 WI2-2373I1.2A0A1W2PRP0 233 aa12.03□□□□□ -0.48
CHAF1A-201ENST00000301280 RNF151Q2KHN1 245 aa12.03□□□□□ -0.48
CHAF1A-201ENST00000301280 NEGR1Q7Z3B1 354 aa12.03□□□□□ -0.48
CHAF1A-201ENST00000301280 PIMREGQ9BSJ6 248 aa12.03□□□□□ -0.48
CHAF1A-201ENST00000301280 C7orf71A4D174 169 aa12.03□□□□□ -0.48
CHAF1A-201ENST00000301280 SIGLEC8Q9NYZ4 499 aa12.03□□□□□ -0.48
CHAF1A-201ENST00000301280 ORMDL3Q8N138 153 aa12.02□□□□□ -0.49
CHAF1A-201ENST00000301280 SMAD7O15105 426 aaKnown RBP12.02□□□□□ -0.49
CHAF1A-201ENST00000301280 AVPP01185 164 aa12.02□□□□□ -0.49
CHAF1A-201ENST00000301280 FAM74A4Q5TZK3 123 aa12.02□□□□□ -0.49
CHAF1A-201ENST00000301280 C8orf86Q6ZUL3 223 aa12.02□□□□□ -0.49
CHAF1A-201ENST00000301280 DTX2Q86UW9 622 aa12.02□□□□□ -0.49
CHAF1A-201ENST00000301280 LINC00477Q96M19 166 aa12.02□□□□□ -0.49
CHAF1A-201ENST00000301280 ITPR2Q14571 2701 aa12.02□□□□□ -0.49
CHAF1A-201ENST00000301280 FABP5P3A8MUU1 101 aa12.01□□□□□ -0.49
CHAF1A-201ENST00000301280 F5H697 171 aa12.01□□□□□ -0.49
CHAF1A-201ENST00000301280 MINOS1Q5TGZ0 78 aa12.01□□□□□ -0.49
CHAF1A-201ENST00000301280 MINOS1-NBL1R4GNA1 71 aa12.01□□□□□ -0.49
CHAF1A-201ENST00000301280 BUB3O43684 328 aa12.01□□□□□ -0.49
CHAF1A-201ENST00000301280 ZNF502Q8TBZ5 544 aa12.01□□□□□ -0.49
CHAF1A-201ENST00000301280 SAPCD1Q5SSQ6 148 aa12□□□□□ -0.49
CHAF1A-201ENST00000301280 BVES-AS1Q5T3Y7 98 aa12□□□□□ -0.49
CHAF1A-201ENST00000301280 IGHV4-59P01825 116 aa11.99□□□□□ -0.49
CHAF1A-201ENST00000301280 ZNF688P0C7X2 276 aa11.99□□□□□ -0.49
CHAF1A-201ENST00000301280 LEPP41159 167 aa11.99□□□□□ -0.49
CHAF1A-201ENST00000301280 EMP1P54849 157 aa11.99□□□□□ -0.49
CHAF1A-201ENST00000301280 COX8CQ7Z4L0 72 aa11.99□□□□□ -0.49
CHAF1A-201ENST00000301280 PRSS47A8MTI9 375 aa11.99□□□□□ -0.49
CHAF1A-201ENST00000301280 BMI1P35226 326 aa11.99□□□□□ -0.49
CHAF1A-201ENST00000301280 CDKN1BP46527 198 aa11.99□□□□□ -0.49
CHAF1A-201ENST00000301280 SLC25A34Q6PIV7 304 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms