RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.12■□□□□ 0.33
PTX3-201ENST00000295927 HIST1H2BHQ93079 126 aa17.12■□□□□ 0.33
PTX3-201ENST00000295927 HIST1H2BNQ99877 126 aa17.12■□□□□ 0.33
PTX3-201ENST00000295927 HIST1H2BMQ99879 126 aa17.12■□□□□ 0.33
PTX3-201ENST00000295927 C2CD3Q4AC94 2353 aa17.12■□□□□ 0.33
PTX3-201ENST00000295927 TMEM189A5PLL7 270 aa17.11■□□□□ 0.33
PTX3-201ENST00000295927 PGLYRP4Q96LB8 373 aa17.11■□□□□ 0.33
PTX3-201ENST00000295927 WNK1Q9H4A3 2382 aa17.11■□□□□ 0.33
PTX3-201ENST00000295927 CYSRT1A8MQ03 144 aa17.11■□□□□ 0.33
PTX3-201ENST00000295927 DEFB114Q30KQ6 69 aa17.11■□□□□ 0.33
PTX3-201ENST00000295927 RBPMS2Q6ZRY4 209 aaKnown RBP17.11■□□□□ 0.33
PTX3-201ENST00000295927 TMEM61Q8N0U2 210 aa17.11■□□□□ 0.33
PTX3-201ENST00000295927 GNB1LQ9BYB4 327 aa17.1■□□□□ 0.33
PTX3-201ENST00000295927 TMSB15BA0A087X1C1 80 aa17.09■□□□□ 0.33
PTX3-201ENST00000295927 SNURFLB1AK76 121 aa17.09■□□□□ 0.33
PTX3-201ENST00000295927 S100A6P06703 90 aa17.09■□□□□ 0.33
PTX3-201ENST00000295927 FOXA3P55318 350 aaPredicted RBP17.09■□□□□ 0.33
PTX3-201ENST00000295927 A0A1B0GUS0 222 aa17.09■□□□□ 0.33
PTX3-201ENST00000295927 GDF5OSQ5U4N7 250 aa17.09■□□□□ 0.33
PTX3-201ENST00000295927 FAM19A4Q96LR4 140 aa17.09■□□□□ 0.33
PTX3-201ENST00000295927 COX19Q49B96 90 aa17.08■□□□□ 0.33
PTX3-201ENST00000295927 PRR9Q5T870 116 aa17.08■□□□□ 0.33
PTX3-201ENST00000295927 WDR73Q6P4I2 378 aa17.08■□□□□ 0.33
PTX3-201ENST00000295927 TMEM136Q6ZRR5 245 aa17.08■□□□□ 0.33
PTX3-201ENST00000295927 NDUFA11Q86Y39 141 aa17.08■□□□□ 0.33
PTX3-201ENST00000295927 ZFAND2AQ8N6M9 145 aa17.08■□□□□ 0.33
PTX3-201ENST00000295927 XKRY2A2RUG3 117 aa17.08■□□□□ 0.32
PTX3-201ENST00000295927 ORM1P02763 201 aa17.08■□□□□ 0.32
PTX3-201ENST00000295927 CD33P20138 364 aa17.08■□□□□ 0.32
PTX3-201ENST00000295927 SNRPEP62304 92 aaKnown RBP17.08■□□□□ 0.32
PTX3-201ENST00000295927 CD300EQ496F6 205 aaPredicted RBP17.08■□□□□ 0.32
PTX3-201ENST00000295927 ATP5L2Q7Z4Y8 100 aa17.08■□□□□ 0.32
PTX3-201ENST00000295927 MRPL18Q9H0U6 180 aaKnown RBP17.08■□□□□ 0.32
PTX3-201ENST00000295927 TRAV2A0A0B4J234 112 aa17.07■□□□□ 0.32
PTX3-201ENST00000295927 RASL11AQ6T310 242 aa17.07■□□□□ 0.32
PTX3-201ENST00000295927 A0A1B0GXF2 115 aa17.06■□□□□ 0.32
PTX3-201ENST00000295927 RAB4BP61018 213 aa17.06■□□□□ 0.32
PTX3-201ENST00000295927 ZNF575Q86XF7 245 aa17.06■□□□□ 0.32
PTX3-201ENST00000295927 SIGLEC8Q9NYZ4 499 aa17.06■□□□□ 0.32
PTX3-201ENST00000295927 TRBV7-9A0A0J9YWB2 115 aa17.06■□□□□ 0.32
PTX3-201ENST00000295927 A0A0J9YX75 114 aa17.06■□□□□ 0.32
PTX3-201ENST00000295927 C5orf52A6NGY3 159 aa17.06■□□□□ 0.32
PTX3-201ENST00000295927 J3KRW8 73 aa17.06■□□□□ 0.32
PTX3-201ENST00000295927 MT-ND6P03923 174 aa17.06■□□□□ 0.32
PTX3-201ENST00000295927 NDUFA6P56556 154 aa17.06■□□□□ 0.32
PTX3-201ENST00000295927 RPS20P60866 119 aaKnown RBP17.06■□□□□ 0.32
PTX3-201ENST00000295927 LINC01559Q495D7 138 aa17.06■□□□□ 0.32
PTX3-201ENST00000295927 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.06■□□□□ 0.32
PTX3-201ENST00000295927 SAV1Q9H4B6 383 aaPredicted RBP17.06■□□□□ 0.32
PTX3-201ENST00000295927 C11orf21Q9P2W6 132 aa17.06■□□□□ 0.32
PTX3-201ENST00000295927 SORL1Q92673 2214 aa17.05■□□□□ 0.32
PTX3-201ENST00000295927 Q6ZQT7 251 aa17.05■□□□□ 0.32
PTX3-201ENST00000295927 CRISP2P16562 243 aa17.04■□□□□ 0.32
PTX3-201ENST00000295927 CAMPP49913 170 aa17.04■□□□□ 0.32
PTX3-201ENST00000295927 Q6AWC8 147 aa17.04■□□□□ 0.32
PTX3-201ENST00000295927 EBLN2Q6P2I7 272 aa17.04■□□□□ 0.32
PTX3-201ENST00000295927 GPX1P07203 203 aa17.04■□□□□ 0.32
PTX3-201ENST00000295927 TPPP3Q9BW30 176 aa17.04■□□□□ 0.32
PTX3-201ENST00000295927 IGKV3D-20A0A0C4DH25 116 aa17.03■□□□□ 0.32
PTX3-201ENST00000295927 HLA-DQA1P01909 254 aa17.03■□□□□ 0.32
PTX3-201ENST00000295927 HBBP68871 147 aa17.03■□□□□ 0.32
PTX3-201ENST00000295927 APRG1Q8IVJ8 170 aa17.03■□□□□ 0.32
PTX3-201ENST00000295927 TRAV25A0A0B4J276 109 aa17.02■□□□□ 0.32
PTX3-201ENST00000295927 FOXI2Q6ZQN5 318 aa17.02■□□□□ 0.32
PTX3-201ENST00000295927 AGRNO00468 2067 aa17.02■□□□□ 0.31
PTX3-201ENST00000295927 A0A1B0GUT8 65 aa17.02■□□□□ 0.31
PTX3-201ENST00000295927 ARMS2P0C7Q2 107 aa17.02■□□□□ 0.31
PTX3-201ENST00000295927 DEFB131AP59861 70 aa17.02■□□□□ 0.31
PTX3-201ENST00000295927 KIR3DS1Q14943 382 aa17.02■□□□□ 0.31
PTX3-201ENST00000295927 SPAG8Q99932 426 aaPredicted RBP17.02■□□□□ 0.31
PTX3-201ENST00000295927 GRIFINA4D1Z8 144 aa17.01■□□□□ 0.31
PTX3-201ENST00000295927 RNASE4P34096 147 aaKnown RBP17.01■□□□□ 0.31
PTX3-201ENST00000295927 LYZL1Q6UWQ5 148 aa17.01■□□□□ 0.31
PTX3-201ENST00000295927 TRAV21A0A0B4J279 112 aa17■□□□□ 0.31
PTX3-201ENST00000295927 OR4C46A6NHA9 309 aa17■□□□□ 0.31
PTX3-201ENST00000295927 ODF3Q96PU9 254 aa17■□□□□ 0.31
PTX3-201ENST00000295927 DUSP14O95147 198 aaKnown RBP17■□□□□ 0.31
PTX3-201ENST00000295927 IGKV3-20P01619 116 aa17■□□□□ 0.31
PTX3-201ENST00000295927 IGLC6P0CF74 106 aa17■□□□□ 0.31
PTX3-201ENST00000295927 FER1L6-AS1Q8NA97 138 aa17■□□□□ 0.31
PTX3-201ENST00000295927 ZNF256Q9Y2P7 627 aaPredicted RBP17■□□□□ 0.31
PTX3-201ENST00000295927 NIPBLQ6KC79 2804 aaeCLIP16.99■□□□□ 0.31
PTX3-201ENST00000295927 KLLNB2CW77 178 aa16.99■□□□□ 0.31
PTX3-201ENST00000295927 RIGQ13278 110 aa16.99■□□□□ 0.31
PTX3-201ENST00000295927 UBE2CO00762 179 aa16.98■□□□□ 0.31
PTX3-201ENST00000295927 SAP30O75446 220 aa16.98■□□□□ 0.31
PTX3-201ENST00000295927 APCSP02743 223 aa16.98■□□□□ 0.31
PTX3-201ENST00000295927 SLAQ13239 276 aa16.98■□□□□ 0.31
PTX3-201ENST00000295927 BORCS7Q96B45 105 aa16.98■□□□□ 0.31
PTX3-201ENST00000295927 SSBP4Q9BWG4 385 aaPredicted RBP16.98■□□□□ 0.31
PTX3-201ENST00000295927 MAP6D1Q9H9H5 199 aa16.98■□□□□ 0.31
PTX3-201ENST00000295927 KNCNA6PVL3 124 aa16.98■□□□□ 0.31
PTX3-201ENST00000295927 KIAA1644Q3SXP7 199 aa16.98■□□□□ 0.31
PTX3-201ENST00000295927 CTRLP40313 264 aa16.97■□□□□ 0.31
PTX3-201ENST00000295927 LEPP41159 167 aa16.97■□□□□ 0.31
PTX3-201ENST00000295927 PF4P02776 101 aa16.96■□□□□ 0.31
PTX3-201ENST00000295927 HOXA5P20719 270 aa16.96■□□□□ 0.31
PTX3-201ENST00000295927 NAGKQ9UJ70 344 aa16.96■□□□□ 0.31
PTX3-201ENST00000295927 ZNF124Q15973 351 aa16.96■□□□□ 0.3
PTX3-201ENST00000295927 PRR31Q5SQ13 230 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms